Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G1962 Papaver somniferum HOM05D004164 ORTHO05D004891 1.3e-202 709.5 356 100.0
PSO507G0030 Papaver somniferum HOM05D004164 ORTHO05D004891 1.2e-195 686.4 357 96.6
PSO832G2156 Papaver somniferum HOM05D004164 ORTHO05D004891 4.3e-166 588.2 348 83.6
PSO832G4194 Papaver somniferum HOM05D004164 ORTHO05D004891 3.2e-161 572.0 354 81.1
PSO507G0017 Papaver somniferum HOM05D004164 ORTHO05D004891 1.2e-160 570.1 334 84.4
PSO210G6256 Papaver somniferum HOM05D004164 ORTHO05D004891 2.4e-156 555.8 334 81.4
Nn4g25427 Nelumbo nucifera HOM05D004164 ORTHO05D004891 9.3e-153 543.9 337 78.6
PSO210G5660 Papaver somniferum HOM05D004164 ORTHO05D004891 1.2e-152 543.5 354 76.3
PSO761G0590 Papaver somniferum HOM05D004164 ORTHO05D004891 3.3e-150 535.4 354 75.7
Nn3g21861 Nelumbo nucifera HOM05D004164 ORTHO05D004891 1.5e-142 510.0 334 73.4
TAR365G1146 Trochodendron aralioides HOM05D004164 ORTHO05D004891 9.0e-140 500.7 331 72.8
MBI18_g40410_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.3e-138 496.9 339 72.3
PSO761G0410 Papaver somniferum HOM05D004164 ORTHO05D004891 5.1e-135 485.0 347 70.6
Aqoxy2G03733 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 2.2e-130 469.5 347 69.2
PSO063G3797 Papaver somniferum HOM05D004164 ORTHO05D004891 1.4e-129 466.8 342 67.5
PSO832G0925 Papaver somniferum HOM05D004164 ORTHO05D004891 3.5e-128 462.2 336 67.3
PSO173G0010 Papaver somniferum HOM05D004164 ORTHO05D004891 6.0e-128 461.5 333 67.3
PSO782G1386 Papaver somniferum HOM05D004164 ORTHO05D004891 1.8e-127 459.9 337 68.2
MBI18_g36466_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 8.2e-117 424.5 334 63.8
PSO781G0333 Papaver somniferum HOM05D004164 ORTHO05D004891 3.4e-115 419.1 329 62.0
PSO761G0549 Papaver somniferum HOM05D004164 ORTHO05D004891 2.5e-113 412.9 334 60.5
PSO507G0015 Papaver somniferum HOM05D004164 ORTHO05D004891 5.7e-102 375.2 216 88.4
PSO173G0166 Papaver somniferum HOM05D004164 ORTHO05D004891 3.1e-100 369.4 265 67.5
Duzib132G1201 Durio zibethinus HOM05D004164 ORTHO05D004891 1.0e-95 354.4 329 56.8
Thecc.02G135100 Theobroma cacao HOM05D004164 ORTHO05D004891 1.0e-95 354.4 329 57.1
Aa31LG1G17650 Aethionema arabicum HOM05D004164 ORTHO05D004891 4.0e-95 352.4 330 55.5
Gohir.D12G015900 Gossypium hirsutum HOM05D004164 ORTHO05D004891 6.7e-95 351.7 332 56.6
Gorai.008G016000 Gossypium raimondii HOM05D004164 ORTHO05D004891 6.7e-95 351.7 333 56.5
CSS0040430 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 8.8e-95 351.3 326 57.1
Thhalv10004559m.g Eutrema salsugineum HOM05D004164 ORTHO05D004891 8.8e-95 351.3 330 56.4
CSS0002795 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 2.6e-94 349.7 326 56.7
MELO3C018623.2 Cucumis melo HOM05D004164 ORTHO05D004891 4.4e-94 349.0 331 54.4
Actinidia24002 Actinidia chinensis HOM05D004164 ORTHO05D004891 5.7e-94 348.6 340 54.7
AL8G41570 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 5.7e-94 348.6 326 56.1
HanXRQChr10g0291731 Helianthus annuus HOM05D004164 ORTHO05D004891 5.7e-94 348.6 331 54.4
Gohir.A12G015600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.3e-93 347.4 330 56.1
AL8G41600 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 1.7e-93 347.1 326 55.8
TPR.G10321 Trifolium pratense HOM05D004164 ORTHO05D004891 1.7e-93 347.1 331 55.0
AT5G64250 Arabidopsis thaliana HOM05D004164 ORTHO05D004891 4.8e-93 345.5 326 56.4
arahy.Tifrunner.gnm1.ann1.XH6BES Arachis hypogaea HOM05D004164 ORTHO05D004891 4.8e-93 345.5 329 54.7
BcaC01g02680 Brassica carinata HOM05D004164 ORTHO05D004891 8.2e-93 344.7 330 55.8
BolC3t18463H Brassica oleracea HOM05D004164 ORTHO05D004891 8.2e-93 344.7 330 55.8
A06p30940 Brassica napus HOM05D004164 ORTHO05D004891 1.1e-92 344.4 330 55.2
BraA06t26033Z Brassica rapa HOM05D004164 ORTHO05D004891 1.1e-92 344.4 330 55.2
CARHR278160 Cardamine hirsuta HOM05D004164 ORTHO05D004891 1.4e-92 344.0 330 54.8
BcaB02g09775 Brassica carinata HOM05D004164 ORTHO05D004891 2.4e-92 343.2 328 54.6
Sp2g27310 Schrenkiella parvula HOM05D004164 ORTHO05D004891 4.1e-92 342.4 330 55.5
PGR042G3604 Punica granatum HOM05D004164 ORTHO05D004891 5.3e-92 342.0 333 54.4
C03p62030 Brassica napus HOM05D004164 ORTHO05D004891 7.0e-92 341.7 330 55.5
THA.LOC104799917 Tarenaya hassleriana HOM05D004164 ORTHO05D004891 7.0e-92 341.7 331 54.1
Sed0011830 Sechium edule HOM05D004164 ORTHO05D004891 9.1e-92 341.3 331 53.8
TAR381G0722 Trochodendron aralioides HOM05D004164 ORTHO05D004891 9.1e-92 341.3 332 54.5
Eucgr.G00847 Eucalyptus grandis HOM05D004164 ORTHO05D004891 1.2e-91 340.9 331 54.4
QL11p022503 Quercus lobata HOM05D004164 ORTHO05D004891 2.0e-91 340.1 329 54.1
Prupe.8G064000 Prunus persica HOM05D004164 ORTHO05D004891 2.7e-91 339.7 339 54.0
VMungo0540G2402 Vigna mungo HOM05D004164 ORTHO05D004891 2.7e-91 339.7 329 54.4
ClCG09G015620 Citrullus lanatus HOM05D004164 ORTHO05D004891 3.5e-91 339.3 331 54.4
Dinv24178 Davidia involucrata HOM05D004164 ORTHO05D004891 5.9e-91 338.6 328 53.7
Cfa005671 Carpinus fangiana HOM05D004164 ORTHO05D004891 1.0e-90 337.8 330 54.5
PSO210G2683 Papaver somniferum HOM05D004164 ORTHO05D004891 1.3e-90 337.4 331 55.3
TWI14G1169 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 1.3e-90 337.4 331 55.3
Lj6g0000010 Lotus japonicus HOM05D004164 ORTHO05D004891 2.2e-90 336.7 330 53.6
Sc08g0003530 Simmondsia chinensis HOM05D004164 ORTHO05D004891 2.2e-90 336.7 330 53.9
Gohir.A04G114200 Gossypium hirsutum HOM05D004164 ORTHO05D004891 2.9e-90 336.3 329 54.7
Pp3c2_200 Physcomitrium patens HOM05D004164 ORTHO05D004891 2.9e-90 336.3 330 52.1
Lsat_1_v5_gn_5_108141 Lactuca sativa HOM05D004164 ORTHO05D004891 3.8e-90 335.9 331 53.5
Lalb_Chr20g0122971 Lupinus albus HOM05D004164 ORTHO05D004891 3.8e-90 335.9 331 55.6
MD05G1043200 Malus domestica HOM05D004164 ORTHO05D004891 3.8e-90 335.9 328 53.7
Cc02_g21290 Coffea canephora HOM05D004164 ORTHO05D004891 5.0e-90 335.5 330 54.8
Aqoxy6G02071 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 8.5e-90 334.7 331 54.1
Hma1.2p1_0784F.1_g217100 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 8.5e-90 334.7 331 54.7
Ca_16502_v3 Cicer arietinum L. HOM05D004164 ORTHO05D004891 1.1e-89 334.3 330 54.5
Peaxi162Scf01060g00013 Petunia axillaris HOM05D004164 ORTHO05D004891 1.1e-89 334.3 328 53.4
TWI59G0238 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 1.1e-89 334.3 331 54.1
Carub.0008s2504 Capsella rubella HOM05D004164 ORTHO05D004891 1.5e-89 334.0 330 54.2
Glyma.08G178100 Glycine max HOM05D004164 ORTHO05D004891 1.5e-89 334.0 331 54.1
Potri.017G051800 Populus trichocarpa HOM05D004164 ORTHO05D004891 1.9e-89 333.6 332 53.9
Lj4g0000280 Lotus japonicus HOM05D004164 ORTHO05D004891 3.2e-89 332.8 329 52.6
CAN.G523.53 Capsicum annuum HOM05D004164 ORTHO05D004891 4.2e-89 332.4 328 52.4
Ciclev10028812m.g Citrus clementina HOM05D004164 ORTHO05D004891 4.2e-89 332.4 330 53.0
Hund00072 Selenicereus undatus HOM05D004164 ORTHO05D004891 4.2e-89 332.4 329 53.2
PGSC0003DMG400012550 Solanum tuberosum HOM05D004164 ORTHO05D004891 4.2e-89 332.4 328 52.4
MSTRG.20292 Avicennia marina HOM05D004164 ORTHO05D004891 5.5e-89 332.0 331 53.8
Atru.chr6.1169 Acer truncatum HOM05D004164 ORTHO05D004891 9.4e-89 331.3 331 52.9
CsaV3_7G006720 Cucumis sativus L. HOM05D004164 ORTHO05D004891 9.4e-89 331.3 318 54.1
Ah.01g022180 Amaranthus hybridus HOM05D004164 ORTHO05D004891 1.2e-88 330.9 329 52.0
CiPaw.05G034200 Carya illinoinensis HOM05D004164 ORTHO05D004891 1.6e-88 330.5 331 52.9
Medtr3g069190 Medicago truncatula HOM05D004164 ORTHO05D004891 2.1e-88 330.1 331 53.5
Sabra17G0043400 Salix brachista HOM05D004164 ORTHO05D004891 3.6e-88 329.3 331 52.3
SabraUnG0002700 Salix brachista HOM05D004164 ORTHO05D004891 3.6e-88 329.3 331 52.3
vmacro01837 Vaccinium macrocarpon HOM05D004164 ORTHO05D004891 3.6e-88 329.3 325 54.2
FAN18G3873 Fragaria x ananassa HOM05D004164 ORTHO05D004891 4.7e-88 328.9 331 52.0
RcHm_v2.0_Chr6g0271551 Rosa chinensis HOM05D004164 ORTHO05D004891 4.7e-88 328.9 331 52.3
CANSAT11G1236 Cannabis sativa HOM05D004164 ORTHO05D004891 8.0e-88 328.2 329 52.0
Sopen01g047880 Solanum pennellii HOM05D004164 ORTHO05D004891 8.0e-88 328.2 328 51.5
Solyc01g105370.4 Solanum lycopersicum HOM05D004164 ORTHO05D004891 1.0e-87 327.8 328 51.5
ECA234G4615 Erigeron canadensis HOM05D004164 ORTHO05D004891 1.4e-87 327.4 331 52.0
Nitab4.5_0000863g0200 Nicotiana tabacum HOM05D004164 ORTHO05D004891 1.4e-87 327.4 328 52.1
Manes.07G033800 Manihot esculenta HOM05D004164 ORTHO05D004891 1.8e-87 327.0 330 53.0
AUR62013150 Chenopodium quinoa HOM05D004164 ORTHO05D004891 4.0e-87 325.9 344 51.5
Phvul.006G205400 Phaseolus vulgaris HOM05D004164 ORTHO05D004891 5.2e-87 325.5 331 53.5
GSVIVG01015759001 Vitis vinifera HOM05D004164 ORTHO05D004891 8.8e-87 324.7 330 53.6
Psat5g128640 Pisum sativum HOM05D004164 ORTHO05D004891 2.0e-86 323.6 331 52.9
Cpa.g.sc42.29 Carica papaya HOM05D004164 ORTHO05D004891 4.4e-86 322.4 350 52.3
DCAR_001777 Daucus carota HOM05D004164 ORTHO05D004891 4.4e-86 322.4 331 53.2
Gorai.012G142600 Gossypium raimondii HOM05D004164 ORTHO05D004891 1.3e-85 320.9 329 52.6
Lj5A235T51 Lonicera japonica HOM05D004164 ORTHO05D004891 1.7e-85 320.5 342 50.6
Zm00001eb033580 Zea mays HOM05D004164 ORTHO05D004891 2.2e-85 320.1 327 52.6
ATR0782G002 Amborella trichopoda HOM05D004164 ORTHO05D004891 1.4e-84 317.4 320 51.9
arahy.Tifrunner.gnm1.ann1.IF3X13 Arachis hypogaea HOM05D004164 ORTHO05D004891 1.4e-84 317.4 329 52.0
Rhsim11G0139400 Rhododendron simsii HOM05D004164 ORTHO05D004891 5.4e-84 315.5 324 53.7
Migut.B00589 Erythranthe guttata HOM05D004164 ORTHO05D004891 7.0e-84 315.1 330 50.9
RcHm_v2.0_Chr6g0271711 Rosa chinensis HOM05D004164 ORTHO05D004891 7.0e-84 315.1 332 50.9
SalBow5G4318 Salvia bowleyana HOM05D004164 ORTHO05D004891 2.7e-83 313.2 360 49.2
SalBow5G1609 Salvia bowleyana HOM05D004164 ORTHO05D004891 4.5e-83 312.4 360 48.9
SMO143G0159 Selaginella moellendorffii HOM05D004164 ORTHO05D004891 1.6e-80 303.9 329 47.7
Mapoly0043s0005 Marchantia polymorpha HOM05D004164 ORTHO05D004891 2.7e-80 303.1 331 47.7
Gohir.D04G155600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 2.3e-79 300.1 329 50.2
Oeu007975.1 Olea europaea HOM05D004164 ORTHO05D004891 2.3e-79 300.1 403 44.2
AagrBONN_evm.TU.Sc2ySwM_228.2787 Anthoceros agrestis HOM05D004164 ORTHO05D004891 7.5e-78 295.0 324 48.5
EL10Ac9g21504 Beta vulgaris HOM05D004164 ORTHO05D004891 5.9e-75 285.4 329 47.7
FvH4_5g07040 Fragaria vesca HOM05D004164 ORTHO05D004891 1.7e-74 283.9 275 52.0
HPP92_004281 Vanilla planifolia HOM05D004164 ORTHO05D004891 1.5e-73 280.8 328 47.9
AUR62010154 Chenopodium quinoa HOM05D004164 ORTHO05D004891 3.0e-71 273.1 343 46.1
MBI02_g02171_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 5.4e-68 262.3 275 50.9
Os08g0485400 Oryza sativa ssp. japonica HOM05D004164 ORTHO05D004891 4.6e-67 259.2 271 52.4
PSO541G2216 Papaver somniferum HOM05D004164 ORTHO05D004891 1.1e-65 254.6 196 62.8
SGA_v2.0_scaffold83G26314 Striga asiatica HOM05D004164 ORTHO05D004891 1.8e-63 247.3 354 41.8
Nn2g14913 Nelumbo nucifera HOM05D004164 ORTHO05D004891 6.8e-63 245.4 337 43.9
Lj6g0021052 Lotus japonicus HOM05D004164 ORTHO05D004891 2.0e-62 243.8 227 57.3
PSO646G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 2.4e-60 236.9 181 63.5
FAN15G1714 Fragaria x ananassa HOM05D004164 ORTHO05D004891 6.0e-59 232.3 220 55.0
Prupe.8G063800 Prunus persica HOM05D004164 ORTHO05D004891 5.2e-55 219.2 222 53.2
Haze_10597 Corylus avellana HOM05D004164 ORTHO05D004891 1.1e-47 194.9 236 46.2
Nitab4.5_0002401g0010 Nicotiana tabacum HOM05D004164 ORTHO05D004891 9.9e-38 161.8 149 56.4
Actinidia26597 Actinidia chinensis HOM05D004164 ORTHO05D004891 1.1e-33 148.3 150 50.0
MBI18_g38521_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 9.6e-33 145.2 163 50.9
FAN24G1884 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.3e-32 144.8 179 45.3
Pp3s30_626 Physcomitrium patens HOM05D004164 ORTHO05D004891 6.9e-31 139.0 369 30.1
PSO400G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 9.0e-31 138.7 98 68.4
FvH4_2g11900 Fragaria vesca HOM05D004164 ORTHO05D004891 1.3e-29 134.8 142 49.3
TPR.G9891 Trifolium pratense HOM05D004164 ORTHO05D004891 1.1e-28 131.7 174 47.1
PRCOL_00000119 Prasinoderma coloniale HOM05D004164 ORTHO05D004891 1.6e-27 127.9 350 31.1
Cfa026765 Carpinus fangiana HOM05D004164 ORTHO05D004891 6.9e-23 112.5 357 29.4
FvH4_2g11890 Fragaria vesca HOM05D004164 ORTHO05D004891 2.0e-22 110.9 137 47.4
TPR.G11284 Trifolium pratense HOM05D004164 ORTHO05D004891 3.4e-22 110.2 122 50.0
Cfa023826 Carpinus fangiana HOM05D004164 ORTHO05D004891 4.9e-21 106.3 326 29.8
MD05G1043700 Malus domestica HOM05D004164 ORTHO05D004891 4.9e-21 106.3 213 33.8
FAN24G2526 Fragaria x ananassa HOM05D004164 ORTHO05D004891 3.2e-20 103.6 107 49.5
TPR.G19821 Trifolium pratense HOM05D004164 ORTHO05D004891 9.6e-17 92.0 165 38.2
Cfa026889 Carpinus fangiana HOM05D004164 ORTHO05D004891 1.4e-15 88.2 358 27.7
COL.COLO4_01173 Corchorus olitorius HOM05D004164 ORTHO05D004891 1.2e-14 85.1 268 29.1
Prupe.8G063900 Prunus persica HOM05D004164 ORTHO05D004891 4.2e-12 76.6 63 55.6
CSS0002492 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 1.6e-11 74.7 66 54.5
MCO10G397 Micromonas commoda HOM05D004164 ORTHO05D004891 2.1e-11 74.3 203 34.5
Hma1.2p1_0784F.1_g217070 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 1.0e-10 72.0 66 51.5
Nn5g30063 Nelumbo nucifera HOM05D004164 ORTHO05D004891 5.7e-09 66.2 52 57.7
TAR019G0004 Trochodendron aralioides HOM05D004164 ORTHO05D004891 3.7e-08 63.5 48 60.4
MD10G1050600 Malus domestica HOM05D004164 ORTHO05D004891 6.3e-08 62.8 113 30.1
MBI02_g02172_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.1e-07 62.0 43 65.1
TAR622G0536 Trochodendron aralioides HOM05D004164 ORTHO05D000005 3.1e-07 60.5 98 37.8
Zm00001eb051650 Zea mays HOM05D004164 ORTHO05D004891 5.3e-07 59.7 79 43.0


User provided reference genes

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