Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G1844 Papaver somniferum HOM05D004197 ORTHO05D004975 1.3e-66 256.1 122 100.0
PSO017G5565 Papaver somniferum HOM05D004197 ORTHO05D004975 4.2e-65 251.1 122 97.5
PSO675G0737 Papaver somniferum HOM05D004197 ORTHO05D004975 4.2e-65 251.1 122 97.5
PSO591G0183 Papaver somniferum HOM05D004197 ORTHO05D004975 3.0e-63 245.0 122 95.1
Hma1.2p1_0307F.1_g119895 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 4.7e-56 221.1 119 87.4
Gohir.A10G143100 Gossypium hirsutum HOM05D004197 ORTHO05D004975 6.1e-56 220.7 119 86.6
Gorai.011G136700 Gossypium raimondii HOM05D004197 ORTHO05D004975 6.1e-56 220.7 119 86.6
Gorai.012G053000 Gossypium raimondii HOM05D004197 ORTHO05D004975 6.1e-56 220.7 119 86.6
Oeu016610.1 Olea europaea HOM05D004197 ORTHO05D004975 8.0e-56 220.3 116 88.8
Duzib151G0052 Durio zibethinus HOM05D004197 ORTHO05D004975 1.0e-55 219.9 119 84.9
Gohir.D04G047600 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.0e-55 219.9 119 86.6
Rhsim03G0176800 Rhododendron simsii HOM05D004197 ORTHO05D004975 1.0e-55 219.9 122 85.2
Duzib212G0574 Durio zibethinus HOM05D004197 ORTHO05D004975 1.8e-55 219.2 119 84.0
Gohir.A05G367700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.8e-55 219.2 119 85.7
Gohir.D10G123800 Gossypium hirsutum HOM05D004197 ORTHO05D004975 2.3e-55 218.8 119 85.7
Thecc.04G166300 Theobroma cacao HOM05D004197 ORTHO05D004975 3.1e-55 218.4 119 84.0
Dinv33200 Davidia involucrata HOM05D004197 ORTHO05D004975 4.4e-54 214.5 120 83.3
CSS0039414 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 5.8e-54 214.2 119 83.2
CSS0047181 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 5.8e-54 214.2 119 83.2
Manes.06G021100 Manihot esculenta HOM05D004197 ORTHO05D004975 5.8e-54 214.2 119 82.4
Hund04335 Selenicereus undatus HOM05D004197 ORTHO05D004975 5.8e-54 214.2 118 82.2
TWI32G1250 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 5.8e-54 214.2 119 84.0
Atru.chr12.1293 Acer truncatum HOM05D004197 ORTHO05D004975 7.5e-54 213.8 119 81.5
CiPaw.11G096400 Carya illinoinensis HOM05D004197 ORTHO05D004975 9.8e-54 213.4 119 81.5
Atru.chr4.2919 Acer truncatum HOM05D004197 ORTHO05D004975 1.3e-53 213.0 119 81.5
Nn1g09691 Nelumbo nucifera HOM05D004197 ORTHO05D004975 2.9e-53 211.8 118 82.2
Cpa.g.sc10.180 Carica papaya HOM05D004197 ORTHO05D004975 3.7e-53 211.5 119 82.4
Eucgr.G02225 Eucalyptus grandis HOM05D004197 ORTHO05D004975 3.7e-53 211.5 119 81.5
PGR142G4086 Punica granatum HOM05D004197 ORTHO05D004975 3.7e-53 211.5 114 86.8
GSVIVG01038138001 Vitis vinifera HOM05D004197 ORTHO05D004975 4.9e-53 211.1 114 86.0
AL5G41720 Arabidopsis lyrata HOM05D004197 ORTHO05D004975 6.4e-53 210.7 119 81.5
Carub.0005s2637 Capsella rubella HOM05D004197 ORTHO05D004975 6.4e-53 210.7 119 81.5
CDE02G1869 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 6.4e-53 210.7 119 83.2
AT3G59650 Arabidopsis thaliana HOM05D004197 ORTHO05D004975 8.3e-53 210.3 119 80.7
arahy.Tifrunner.gnm1.ann1.4JR04K Arachis hypogaea HOM05D004197 ORTHO05D004975 8.3e-53 210.3 119 81.5
arahy.Tifrunner.gnm1.ann1.5DCW4K Arachis hypogaea HOM05D004197 ORTHO05D004975 8.3e-53 210.3 119 81.5
arahy.Tifrunner.gnm1.ann1.E9H45Q Arachis hypogaea HOM05D004197 ORTHO05D004975 8.3e-53 210.3 119 81.5
Cc02_g26370 Coffea canephora HOM05D004197 ORTHO05D004975 8.3e-53 210.3 118 83.1
ATR0733G162 Amborella trichopoda HOM05D004197 ORTHO05D004975 1.1e-52 209.9 119 81.5
MSTRG.27564 Avicennia marina HOM05D004197 ORTHO05D004975 1.1e-52 209.9 118 82.2
Nitab4.5_0007872g0010 Nicotiana tabacum HOM05D004197 ORTHO05D004975 1.4e-52 209.5 118 83.9
Aqoxy7G00569 Aquilegia oxysepala HOM05D004197 ORTHO05D004975 1.9e-52 209.1 119 81.5
CAN.G525.23 Capsicum annuum HOM05D004197 ORTHO05D004975 2.4e-52 208.8 118 83.9
Potri.013G126200 Populus trichocarpa HOM05D004197 ORTHO05D004975 2.4e-52 208.8 119 80.7
QL10p055721 Quercus lobata HOM05D004197 ORTHO05D004975 2.4e-52 208.8 119 83.2
CARHR170020 Cardamine hirsuta HOM05D004197 ORTHO05D004975 4.1e-52 208.0 119 79.8
HanXRQChr10g0286001 Helianthus annuus HOM05D004197 ORTHO05D004975 4.1e-52 208.0 118 83.9
Aa31LG10G13940 Aethionema arabicum HOM05D004197 ORTHO05D004975 5.4e-52 207.6 119 79.8
Glyma.17G164900 Glycine max HOM05D004197 ORTHO05D004975 5.4e-52 207.6 119 79.8
Nitab4.5_0000902g0310 Nicotiana tabacum HOM05D004197 ORTHO05D004975 7.0e-52 207.2 118 83.1
SalBow6G6028 Salvia bowleyana HOM05D004197 ORTHO05D004975 7.0e-52 207.2 118 82.2
CiPaw.12G066300 Carya illinoinensis HOM05D004197 ORTHO05D004975 1.2e-51 206.5 119 78.2
Ciclev10022904m.g Citrus clementina HOM05D004197 ORTHO05D004975 1.2e-51 206.5 119 79.8
ECA247G1539 Erigeron canadensis HOM05D004197 ORTHO05D004975 1.2e-51 206.5 118 83.1
Lsat_1_v5_gn_6_33001 Lactuca sativa HOM05D004197 ORTHO05D004975 1.2e-51 206.5 116 84.5
VMungo0251G3068 Vigna mungo HOM05D004197 ORTHO05D004975 1.2e-51 206.5 114 84.2
AUR62023799 Chenopodium quinoa HOM05D004197 ORTHO05D004975 1.6e-51 206.1 118 79.7
Prupe.1G206900 Prunus persica HOM05D004197 ORTHO05D004975 1.6e-51 206.1 119 80.7
EL10Ac6g15364 Beta vulgaris HOM05D004197 ORTHO05D004975 2.0e-51 205.7 118 80.5
Cfa015042 Carpinus fangiana HOM05D004197 ORTHO05D004975 2.0e-51 205.7 119 79.0
Peaxi162Scf00196g00222 Petunia axillaris HOM05D004197 ORTHO05D004975 2.0e-51 205.7 118 80.5
HPP92_007604 Vanilla planifolia HOM05D004197 ORTHO05D004975 2.0e-51 205.7 119 79.0
ECA240G1468 Erigeron canadensis HOM05D004197 ORTHO05D004975 2.7e-51 205.3 116 82.8
Ca_23424_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 3.5e-51 204.9 119 80.7
Psat1g223520 Pisum sativum HOM05D004197 ORTHO05D004975 3.5e-51 204.9 119 79.0
Ah.13g073520 Amaranthus hybridus HOM05D004197 ORTHO05D004975 4.6e-51 204.5 118 79.7
FAN01G1948 Fragaria x ananassa HOM05D004197 ORTHO05D004975 4.6e-51 204.5 119 82.4
FAN06G1493 Fragaria x ananassa HOM05D004197 ORTHO05D004975 4.6e-51 204.5 119 82.4
RcHm_v2.0_Chr1g0333831 Rosa chinensis HOM05D004197 ORTHO05D004975 4.6e-51 204.5 119 81.5
TPR.G16667 Trifolium pratense HOM05D004197 ORTHO05D004975 4.6e-51 204.5 120 78.3
BcaC07g40496 Brassica carinata HOM05D004197 ORTHO05D004975 6.0e-51 204.1 119 79.0
A09p51920 Brassica napus HOM05D004197 ORTHO05D004975 6.0e-51 204.1 119 79.0
C08p34650 Brassica napus HOM05D004197 ORTHO05D004975 6.0e-51 204.1 119 79.0
BolC8t51067H Brassica oleracea HOM05D004197 ORTHO05D004975 6.0e-51 204.1 119 79.0
BraA09t40628Z Brassica rapa HOM05D004197 ORTHO05D004975 6.0e-51 204.1 119 79.0
MELO3C017759.2 Cucumis melo HOM05D004197 ORTHO05D004975 6.0e-51 204.1 119 78.2
TWI34G1638 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 6.0e-51 204.1 143 72.0
BcaC08g44998 Brassica carinata HOM05D004197 ORTHO05D004975 7.8e-51 203.8 119 79.0
A07p24720 Brassica napus HOM05D000455 ORTHO05D000434 7.8e-51 203.8 119 79.0
C06p26290 Brassica napus HOM05D000455 ORTHO05D000434 7.8e-51 203.8 119 79.0
BolC6t37793H Brassica oleracea HOM05D004197 ORTHO05D004975 7.8e-51 203.8 119 79.0
BraA07t30117Z Brassica rapa HOM05D004197 ORTHO05D004975 7.8e-51 203.8 119 79.0
Lalb_Chr04g0253841 Lupinus albus HOM05D004197 ORTHO05D004975 7.8e-51 203.8 119 79.0
Sp5g03530 Schrenkiella parvula HOM05D004197 ORTHO05D004975 7.8e-51 203.8 119 79.0
BcaB02g07455 Brassica carinata HOM05D004197 ORTHO05D004975 1.0e-50 203.4 119 79.0
Migut.F01587 Erythranthe guttata HOM05D004197 ORTHO05D004975 1.0e-50 203.4 118 81.4
Thhalv10006316m.g Eutrema salsugineum HOM05D004197 ORTHO05D004975 1.0e-50 203.4 119 79.0
FAN03G3355 Fragaria x ananassa HOM05D004197 ORTHO05D004975 1.0e-50 203.4 119 81.5
Phvul.003G238300 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 1.0e-50 203.4 114 82.5
Solyc04g014390.3 Solanum lycopersicum HOM05D004197 ORTHO05D004975 1.0e-50 203.4 114 83.3
Sopen04g006520 Solanum pennellii HOM05D004197 ORTHO05D004975 1.0e-50 203.4 114 83.3
FvH4_7g06200 Fragaria vesca HOM05D004197 ORTHO05D004975 1.3e-50 203.0 119 81.5
Medtr8g022770 Medicago truncatula HOM05D004197 ORTHO05D004975 1.3e-50 203.0 119 79.0
Cc03_g14030 Coffea canephora HOM05D004197 ORTHO05D004975 3.0e-50 201.8 118 81.4
Os03g0207250 Oryza sativa ssp. japonica HOM05D004197 ORTHO05D004975 3.0e-50 201.8 118 80.5
Ca_10539_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 3.9e-50 201.4 119 78.2
Glyma.05G102000 Glycine max HOM05D004197 ORTHO05D004975 6.6e-50 200.7 119 78.2
Lsat_1_v5_gn_5_190681 Lactuca sativa HOM05D004197 ORTHO05D004975 1.1e-49 199.9 116 81.0
Lalb_Chr10g0101191 Lupinus albus HOM05D004197 ORTHO05D004975 1.1e-49 199.9 119 76.5
unitig_899.g14470 Utricularia gibba HOM05D004197 ORTHO05D004975 1.1e-49 199.9 119 76.5
CANSAT80G2644 Cannabis sativa HOM05D004197 ORTHO05D004975 1.5e-49 199.5 119 77.3
PGSC0003DMG401023624 Solanum tuberosum HOM05D004197 ORTHO05D004975 1.5e-49 199.5 114 82.5
THA.LOC104804007 Tarenaya hassleriana HOM05D004197 ORTHO05D004975 1.9e-49 199.1 118 77.1
Psat4g166320 Pisum sativum HOM05D004197 ORTHO05D004975 3.3e-49 198.4 118 76.3
Sed0002539 Sechium edule HOM05D004197 ORTHO05D004975 3.3e-49 198.4 119 77.3
EL10Ac3g06082 Beta vulgaris HOM05D004197 ORTHO05D004975 4.3e-49 198.0 118 77.1
Sp2g07880 Schrenkiella parvula HOM05D004197 ORTHO05D004975 4.3e-49 198.0 119 77.3
ClCG07G015230 Citrullus lanatus HOM05D004197 ORTHO05D004975 5.6e-49 197.6 119 78.2
Lj1g0017974 Lotus japonicus HOM05D004197 ORTHO05D004975 7.3e-49 197.2 114 78.1
TAR362G0244 Trochodendron aralioides HOM05D000090 ORTHO05D001584 7.3e-49 197.2 111 82.9
Zm00001eb400580 Zea mays HOM05D004197 ORTHO05D004975 1.2e-48 196.4 118 78.8
Phvul.010G124900 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 1.6e-48 196.1 111 81.1
MD08G1230600 Malus domestica HOM05D004197 ORTHO05D004975 2.1e-48 195.7 116 78.4
Actinidia11444 Actinidia chinensis HOM05D005056 ORTHO05D006487 4.7e-48 194.5 110 81.8
CsaV3_4G002820 Cucumis sativus L. HOM05D004197 ORTHO05D004975 6.2e-48 194.1 119 74.8
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 1.1e-47 193.4 110 83.6
QL04p073242 Quercus lobata HOM05D004197 ORTHO05D004975 1.8e-47 192.6 119 75.6
TAR629G0957 Trochodendron aralioides HOM05D004197 ORTHO05D004975 1.8e-47 192.6 110 82.7
FAN24G1973 Fragaria x ananassa HOM05D004197 ORTHO05D004975 4.1e-44 181.4 110 80.0
FvH4_2g13530 Fragaria vesca HOM05D004197 ORTHO05D004975 9.2e-44 180.3 112 79.5
QL04p093649 Quercus lobata HOM05D004197 ORTHO05D004975 1.6e-43 179.5 115 74.8
SGA_v2.0_scaffold49G18240 Striga asiatica HOM05D004197 ORTHO05D004975 2.1e-43 179.1 110 77.3
TAR493G0004 Trochodendron aralioides HOM05D004197 ORTHO05D004975 1.9e-41 172.6 107 79.4
Mapoly0027s0066 Marchantia polymorpha HOM05D004197 ORTHO05D004975 1.6e-40 169.5 119 69.7
arahy.Tifrunner.gnm1.ann1.XY21PC Arachis hypogaea HOM05D004197 ORTHO05D004975 6.2e-40 167.5 130 63.1
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 1.4e-39 166.4 94 83.0
AUR62002389 Chenopodium quinoa HOM05D004197 ORTHO05D004975 3.1e-39 165.2 211 44.5
Gorai.004G083000 Gossypium raimondii HOM05D004197 ORTHO05D004975 4.0e-39 164.9 94 81.9
SEGI_18755 Sequoiadendron giganteum HOM05D004197 ORTHO05D004975 6.8e-39 164.1 118 63.6
C04p24770 Brassica napus HOM05D004197 ORTHO05D004975 1.5e-38 162.9 110 74.5
BolC4t23981H Brassica oleracea HOM05D004197 ORTHO05D004975 1.5e-38 162.9 110 74.5
BcaC02g10824 Brassica carinata HOM05D004197 ORTHO05D004975 1.3e-37 159.8 110 73.6
HanXRQChr09g0264591 Helianthus annuus HOM05D004197 ORTHO05D004975 1.7e-37 159.5 90 84.4
Gohir.D08G078000 Gossypium hirsutum HOM05D004197 ORTHO05D004975 2.2e-37 159.1 92 81.5
Lj3g0000340 Lotus japonicus HOM05D004197 ORTHO05D004975 2.9e-37 158.7 123 65.0
Gohir.D10G075200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 4.9e-37 157.9 90 82.2
Sabra13G0105500 Salix brachista HOM05D004197 ORTHO05D004975 6.4e-37 157.5 168 51.8
Gohir.D02G135200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.4e-36 156.4 90 82.2
Rhsim02G0084000 Rhododendron simsii HOM05D004197 ORTHO05D004975 3.2e-36 155.2 89 82.0
Atru.chr12.1301 Acer truncatum HOM05D004197 ORTHO05D004975 5.4e-36 154.5 90 76.7
Atru.chr12.1273 Acer truncatum HOM05D004197 ORTHO05D004975 1.6e-35 152.9 92 75.0
Gorai.011G081000 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.6e-35 152.9 90 81.1
SHI24203 Sapria himalayana HOM05D004197 ORTHO05D004975 1.6e-35 152.9 133 55.6
Peaxi162Scf00474g00723 Petunia axillaris HOM05D004197 ORTHO05D004975 2.7e-35 152.1 118 63.6
Gorai.005G151300 Gossypium raimondii HOM05D004197 ORTHO05D004975 3.5e-35 151.8 90 78.9
Pp3c1_20100 Physcomitrium patens HOM05D004197 ORTHO05D004975 4.6e-35 151.4 119 58.0
arahy.Tifrunner.gnm1.ann1.60591L Arachis hypogaea HOM05D004197 ORTHO05D004975 1.7e-34 149.4 135 60.7
SalBow2G3321 Salvia bowleyana HOM05D004197 ORTHO05D004975 7.3e-33 144.1 85 80.0
unitig_736.g22525 Utricularia gibba HOM05D000398 ORTHO05D000551 9.6e-33 143.7 86 75.6
Zm00001eb007240 Zea mays HOM05D004197 ORTHO05D004975 6.2e-32 141.0 89 75.3
DCAR_029674 Daucus carota HOM05D004197 ORTHO05D004975 3.1e-31 138.7 89 73.0
DCAR_009572 Daucus carota HOM05D004197 ORTHO05D004975 1.5e-30 136.3 89 71.9
Gohir.D08G220700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.7e-29 132.9 77 83.1
TPR.G31074 Trifolium pratense HOM05D004197 ORTHO05D006502 3.8e-29 131.7 95 65.3
CARHR099320 Cardamine hirsuta HOM05D004197 ORTHO05D004975 1.1e-28 130.2 82 70.7
SMO347G0376 Selaginella moellendorffii HOM05D004197 ORTHO05D004975 9.3e-28 127.1 118 50.0
Lsat_1_v5_gn_6_23540 Lactuca sativa HOM05D004197 ORTHO05D004975 3.5e-27 125.2 95 66.3
Gorai.004G076200 Gossypium raimondii HOM05D004197 ORTHO05D004975 5.6e-25 117.9 119 52.9
Cre06.g270650 Chlamydomonas reinhardtii HOM05D004197 ORTHO05D004975 2.8e-24 115.5 111 47.7
Hma1.2p1_0150F.1_g066800 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 3.6e-24 115.2 62 83.9
vmacro16589 Vaccinium macrocarpon HOM05D004197 ORTHO05D004975 3.6e-24 115.2 62 83.9
arahy.Tifrunner.gnm1.ann1.GGUP18 Arachis hypogaea HOM05D004197 ORTHO05D004975 6.2e-24 114.4 62 83.9
COL.COLO4_08144 Corchorus olitorius HOM05D004197 ORTHO05D004975 8.1e-24 114.0 62 83.9
Glyma.07G044001 Glycine max HOM05D004197 ORTHO05D004975 2.4e-20 102.4 90 60.0
Lsat_1_v5_gn_2_131080 Lactuca sativa HOM05D004197 ORTHO05D004975 2.1e-19 99.4 82 64.6
Gohir.D04G172540 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.7e-18 96.3 60 75.0
Gorai.012G161800 Gossypium raimondii HOM05D004197 ORTHO05D004975 8.7e-18 94.0 60 73.3
arahy.Tifrunner.gnm1.ann1.HJ8Q1I Arachis hypogaea HOM05D004197 ORTHO05D004975 2.5e-17 92.4 56 73.2
MCO09G643 Micromonas commoda HOM05D004197 ORTHO05D004975 2.1e-16 89.4 117 38.5
Gorai.004G234500 Gossypium raimondii HOM05D004197 ORTHO05D004975 5.3e-15 84.7 57 70.2
Actinidia27110 Actinidia chinensis HOM05D004197 ORTHO05D004975 1.9e-09 66.2 44 72.7
Thecc.10G088100 Theobroma cacao HOM05D004197 ORTHO05D004975 3.7e-08 62.0 92 41.3


User provided reference genes

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