Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G1803 Papaver somniferum HOM05D002373 ORTHO05D015238 7.0e-81 303.9 154 100.0
PSO782G4223 Papaver somniferum HOM05D002373 ORTHO05D005805 5.6e-46 188.0 105 91.4
PSO210G2728 Papaver somniferum HOM05D002373 ORTHO05D005805 4.6e-40 168.3 105 81.0
COL.COLO4_27181 Corchorus olitorius HOM05D002373 ORTHO05D005805 1.0e-39 167.2 105 81.0
PSO832G3381 Papaver somniferum HOM05D002373 ORTHO05D005805 1.0e-39 167.2 105 80.0
ATR0737G089 Amborella trichopoda HOM05D002373 ORTHO05D005805 1.3e-39 166.8 108 77.8
Haze_09436 Corylus avellana HOM05D002373 ORTHO05D005805 1.3e-39 166.8 105 81.0
Gorai.002G069500 Gossypium raimondii HOM05D002373 ORTHO05D005805 1.3e-39 166.8 105 80.0
Sed0011872 Sechium edule HOM05D002373 ORTHO05D005805 1.3e-39 166.8 105 80.0
Gohir.D05G352400 Gossypium hirsutum HOM05D002373 ORTHO05D005805 1.7e-39 166.4 105 80.0
Gorai.009G384500 Gossypium raimondii HOM05D002373 ORTHO05D005805 1.7e-39 166.4 105 80.0
Dinv00353 Davidia involucrata HOM05D002373 ORTHO05D005805 3.0e-39 165.6 105 80.0
Dinv14923 Davidia involucrata HOM05D002373 ORTHO05D005805 3.0e-39 165.6 105 80.0
Nn1g04126 Nelumbo nucifera HOM05D002373 ORTHO05D005805 3.0e-39 165.6 105 79.0
Thecc.07G091400 Theobroma cacao HOM05D002373 ORTHO05D005805 3.0e-39 165.6 105 81.0
Cfa020575 Carpinus fangiana HOM05D002373 ORTHO05D005805 3.9e-39 165.2 105 80.0
Lj8A155T98 Lonicera japonica HOM05D002373 ORTHO05D005805 5.1e-39 164.9 105 78.1
Glyma.06G240400 Glycine max HOM05D002373 ORTHO05D005805 6.6e-39 164.5 105 80.0
Gohir.A04G032200 Gossypium hirsutum HOM05D002373 ORTHO05D005805 6.6e-39 164.5 105 79.0
PGR031G0335 Punica granatum HOM05D002373 ORTHO05D005805 6.6e-39 164.5 105 78.1
CiPaw.12G118900 Carya illinoinensis HOM05D002373 ORTHO05D005805 8.6e-39 164.1 105 79.0
Duzib213G0111 Durio zibethinus HOM05D002373 ORTHO05D005805 8.6e-39 164.1 105 79.0
Gohir.D01G049600 Gossypium hirsutum HOM05D002373 ORTHO05D005805 8.6e-39 164.1 105 79.0
TAR627G0461 Trochodendron aralioides HOM05D002373 ORTHO05D005805 8.6e-39 164.1 105 78.1
MELO3C016695.2 Cucumis melo HOM05D002373 ORTHO05D005805 1.1e-38 163.7 105 78.1
CsaV3_4G033660 Cucumis sativus L. HOM05D002373 ORTHO05D005805 1.1e-38 163.7 105 78.1
Manes.15G087600 Manihot esculenta HOM05D002373 ORTHO05D005805 1.1e-38 163.7 105 79.0
VMungo1127G0771 Vigna mungo HOM05D002373 ORTHO05D005805 1.1e-38 163.7 105 79.0
Ah.06g184400 Amaranthus hybridus HOM05D002373 ORTHO05D005805 1.5e-38 163.3 105 79.0
CiPaw.11G170300 Carya illinoinensis HOM05D002373 ORTHO05D005805 1.5e-38 163.3 105 78.1
Cc05_g11960 Coffea canephora HOM05D002373 ORTHO05D005805 1.5e-38 163.3 108 76.9
Dinv20180 Davidia involucrata HOM05D002373 ORTHO05D005805 1.5e-38 163.3 105 78.1
Lsat_1_v5_gn_9_97921 Lactuca sativa HOM05D002373 ORTHO05D005805 1.5e-38 163.3 105 77.1
Ciclev10007467m.g Citrus clementina HOM05D002373 ORTHO05D005805 1.9e-38 162.9 105 78.1
ECA234G1789 Erigeron canadensis HOM05D002373 ORTHO05D005805 1.9e-38 162.9 105 77.1
HanXRQChr12g0361121 Helianthus annuus HOM05D002373 ORTHO05D005805 1.9e-38 162.9 105 77.1
Sed0015726 Sechium edule HOM05D002373 ORTHO05D005805 1.9e-38 162.9 105 77.1
ClCG11G018040 Citrullus lanatus HOM05D002373 ORTHO05D005805 2.5e-38 162.5 105 78.1
HanXRQChr10g0302701 Helianthus annuus HOM05D002373 ORTHO05D005805 2.5e-38 162.5 116 70.7
TWI38G2145 Tripterygium wilfordii HOM05D002373 ORTHO05D005805 2.5e-38 162.5 116 72.4
Ca_23054_v3 Cicer arietinum L. HOM05D002373 ORTHO05D005805 3.3e-38 162.2 105 77.1
DCAR_013112 Daucus carota HOM05D002373 ORTHO05D005805 3.3e-38 162.2 105 76.2
Glyma.12G152100 Glycine max HOM05D002373 ORTHO05D005805 3.3e-38 162.2 105 78.1
Eucgr.F03311 Eucalyptus grandis HOM05D002373 ORTHO05D005805 4.3e-38 161.8 105 78.1
Lsat_1_v5_gn_5_128020 Lactuca sativa HOM05D002373 ORTHO05D005805 4.3e-38 161.8 105 77.1
QL08p022123 Quercus lobata HOM05D002373 ORTHO05D005805 4.3e-38 161.8 105 79.0
PGSC0003DMG400012444 Solanum tuberosum HOM05D002373 ORTHO05D005805 4.3e-38 161.8 105 77.1
BcaB02g10930 Brassica carinata HOM05D002373 ORTHO05D015238 5.6e-38 161.4 105 75.2
BcaC08g44046 Brassica carinata HOM05D002373 ORTHO05D005805 5.6e-38 161.4 105 75.2
A05p18610 Brassica napus HOM05D002373 ORTHO05D005805 5.6e-38 161.4 105 75.2
C06p14470 Brassica napus HOM05D002373 ORTHO05D005805 5.6e-38 161.4 105 75.2
BolC6t36627H Brassica oleracea HOM05D002373 ORTHO05D005805 5.6e-38 161.4 105 75.2
BraA05t20752Z Brassica rapa HOM05D002373 ORTHO05D005805 5.6e-38 161.4 105 75.2
CSS0013354 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D005805 5.6e-38 161.4 105 76.2
CSS0014083 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D005805 5.6e-38 161.4 105 77.1
CSS0015785 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D005805 5.6e-38 161.4 105 77.1
Phvul.011G158800 Phaseolus vulgaris HOM05D002373 ORTHO05D005805 5.6e-38 161.4 105 78.1
CARHR043360 Cardamine hirsuta HOM05D002373 ORTHO05D005805 7.3e-38 161.0 105 76.2
Cpa.g.sc80.74 Carica papaya HOM05D002373 ORTHO05D005805 7.3e-38 161.0 105 78.1
Atru.chr2.2485 Acer truncatum HOM05D002373 ORTHO05D005805 9.5e-38 160.6 116 70.7
CANSAT56G0489 Cannabis sativa HOM05D002373 ORTHO05D005805 9.5e-38 160.6 105 76.2
FvH4_3g19810 Fragaria vesca HOM05D002373 ORTHO05D005805 9.5e-38 160.6 108 75.0
Medtr8g463270 Medicago truncatula HOM05D002373 ORTHO05D005805 9.5e-38 160.6 105 77.1
Sopen07g031270 Solanum pennellii HOM05D002373 ORTHO05D005805 9.5e-38 160.6 105 76.2
BcaB02g10929 Brassica carinata HOM05D002373 ORTHO05D005805 1.2e-37 160.2 105 75.2
CAN.G162.52 Capsicum annuum HOM05D002373 ORTHO05D005805 1.2e-37 160.2 105 77.1
AT1G53140 Arabidopsis thaliana HOM05D002373 ORTHO05D005805 1.6e-37 159.8 105 75.2
arahy.Tifrunner.gnm1.ann1.7QC79Z Arachis hypogaea HOM05D002373 ORTHO05D005805 1.6e-37 159.8 151 57.0
arahy.Tifrunner.gnm1.ann1.YQ4YNY Arachis hypogaea HOM05D002373 ORTHO05D005805 1.6e-37 159.8 105 75.2
Potri.011G118500 Populus trichocarpa HOM05D002373 ORTHO05D005805 1.6e-37 159.8 105 76.2
EL10Ac4g08196 Beta vulgaris HOM05D002373 ORTHO05D005805 2.1e-37 159.5 105 75.2
HanXRQChr10g0305641 Helianthus annuus HOM05D002373 ORTHO05D005805 2.1e-37 159.5 105 75.2
Lalb_Chr03g0030661 Lupinus albus HOM05D002373 ORTHO05D005805 2.1e-37 159.5 105 77.1
Prupe.4G180200 Prunus persica HOM05D002373 ORTHO05D005805 2.1e-37 159.5 105 77.1
RcHm_v2.0_Chr5g0033231 Rosa chinensis HOM05D002373 ORTHO05D005805 2.1e-37 159.5 105 75.2
TPR.G22533 Trifolium pratense HOM05D002373 ORTHO05D005805 2.1e-37 159.5 105 76.2
Aqoxy4G00738 Aquilegia oxysepala HOM05D002373 ORTHO05D005805 2.8e-37 159.1 105 75.2
Lj3g0007605 Lotus japonicus HOM05D002373 ORTHO05D005805 2.8e-37 159.1 105 76.2
AL1G61500 Arabidopsis lyrata HOM05D002373 ORTHO05D005805 3.6e-37 158.7 105 74.3
Carub.0001s4230 Capsella rubella HOM05D002373 ORTHO05D005805 3.6e-37 158.7 105 74.3
Nitab4.5_0001241g0050 Nicotiana tabacum HOM05D002373 ORTHO05D005805 3.6e-37 158.7 105 75.2
Nitab4.5_0001336g0070 Nicotiana tabacum HOM05D002373 ORTHO05D005805 3.6e-37 158.7 105 75.2
Psat4g163960 Pisum sativum HOM05D002373 ORTHO05D005805 3.6e-37 158.7 105 75.2
Migut.M00800 Erythranthe guttata HOM05D002373 ORTHO05D005805 6.2e-37 157.9 105 75.2
MBI07_g30194_MAGBIO Magnolia biondii HOM05D002373 ORTHO05D005805 6.2e-37 157.9 105 76.2
SalBow6G1433 Salvia bowleyana HOM05D002373 ORTHO05D005805 6.2e-37 157.9 105 74.3
Sp1g39690 Schrenkiella parvula HOM05D002373 ORTHO05D005805 6.2e-37 157.9 105 74.3
Ah.04g164800 Amaranthus hybridus HOM05D002373 ORTHO05D005805 8.1e-37 157.5 105 74.3
MSTRG.15235 Avicennia marina HOM05D002373 ORTHO05D005805 8.1e-37 157.5 105 73.3
CDE10G0260 Ceratophyllum demersum HOM05D002373 ORTHO05D005805 8.1e-37 157.5 105 75.2
CSS0025198 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D005805 1.1e-36 157.1 105 74.3
AUR62019435 Chenopodium quinoa HOM05D002373 ORTHO05D005805 1.1e-36 157.1 105 74.3
AUR62039199 Chenopodium quinoa HOM05D002373 ORTHO05D005805 1.1e-36 157.1 105 74.3
Sabra11G0103400 Salix brachista HOM05D002373 ORTHO05D005805 1.1e-36 157.1 105 75.2
Hund22839 Selenicereus undatus HOM05D002373 ORTHO05D005805 1.1e-36 157.1 105 76.2
Thhalv10011245m.g Eutrema salsugineum HOM05D002373 ORTHO05D005805 1.4e-36 156.8 105 74.3
Aa31LG10G1990 Aethionema arabicum HOM05D002373 ORTHO05D005805 1.8e-36 156.4 105 74.3
THA.LOC104818083 Tarenaya hassleriana HOM05D002373 ORTHO05D005805 1.8e-36 156.4 105 73.3
MD03G1228500 Malus domestica HOM05D002373 ORTHO05D005805 2.3e-36 156.0 105 75.2
Hma1.2p1_0458F.1_g157050 Hydrangea macrophylla HOM05D002373 ORTHO05D005805 4.0e-36 155.2 103 74.8
Actinidia18767 Actinidia chinensis HOM05D002373 ORTHO05D005805 6.8e-36 154.5 105 73.3
Sc01g0008920 Simmondsia chinensis HOM05D002373 ORTHO05D005805 1.5e-35 153.3 105 74.3
HPP92_006380 Vanilla planifolia HOM05D002373 ORTHO05D005805 1.5e-35 153.3 105 71.4
GSVIVG01014319001 Vitis vinifera HOM05D002373 ORTHO05D005805 1.5e-35 153.3 122 68.0
Lalb_Chr01g0016831 Lupinus albus HOM05D002373 ORTHO05D005805 2.0e-35 152.9 106 74.5
Sp2g07980 Schrenkiella parvula HOM05D002373 ORTHO05D005805 2.0e-35 152.9 105 74.3
FAN11G0806 Fragaria x ananassa HOM05D002373 ORTHO05D005805 2.6e-35 152.5 118 68.6
FAN25G1482 Fragaria x ananassa HOM05D002373 ORTHO05D005805 2.6e-35 152.5 118 68.6
unitig_26.g9526 Utricularia gibba HOM05D002373 ORTHO05D005805 3.4e-35 152.1 105 72.4
FAN16G1089 Fragaria x ananassa HOM05D002373 ORTHO05D005805 4.4e-35 151.8 115 69.6
SGA_v2.0_scaffold73G24259 Striga asiatica HOM05D002373 ORTHO05D005805 4.4e-35 151.8 105 71.4
vmacro09528 Vaccinium macrocarpon HOM05D002373 ORTHO05D005805 5.8e-35 151.4 124 64.5
SalBow6G5097 Salvia bowleyana HOM05D002373 ORTHO05D005805 7.6e-35 151.0 101 73.3
SHI19230 Sapria himalayana HOM05D002373 ORTHO05D005805 1.7e-34 149.8 105 71.4
FAN21G3426 Fragaria x ananassa HOM05D002373 ORTHO05D005805 2.2e-34 149.4 126 64.3
SEGI_09406 Sequoiadendron giganteum HOM05D002373 ORTHO05D005805 6.4e-34 147.9 105 69.5
Os01g0748000 Oryza sativa ssp. japonica HOM05D002373 ORTHO05D005805 8.4e-34 147.5 105 70.5
Zm00001eb153090 Zea mays HOM05D002373 ORTHO05D005805 1.1e-33 147.1 105 69.5
Zm00001eb371030 Zea mays HOM05D002373 ORTHO05D005805 7.1e-33 144.4 105 68.6
ECA240G3893 Erigeron canadensis HOM05D002373 ORTHO05D005805 9.2e-33 144.1 105 71.4
Rhsim04G0021600 Rhododendron simsii HOM05D002373 ORTHO05D005805 2.1e-32 142.9 158 52.5
Pp3c13_12110 Physcomitrium patens HOM05D002373 ORTHO05D005805 1.6e-29 133.3 105 60.0
AagrBONN_evm.TU.Sc2ySwM_368.419 Anthoceros agrestis HOM05D002373 ORTHO05D005805 1.4e-28 130.2 137 51.1
SMO364G0144 Selaginella moellendorffii HOM05D002373 ORTHO05D005805 1.4e-28 130.2 108 60.2
Mapoly0084s0004 Marchantia polymorpha HOM05D002373 ORTHO05D005805 3.1e-28 129.0 105 60.0
MSTRG.12904 Avicennia marina HOM05D002373 ORTHO05D015238 8.9e-28 127.5 88 71.6
Cre12.g529450 Chlamydomonas reinhardtii HOM05D002373 ORTHO05D005805 8.9e-28 127.5 109 62.4
Peaxi162Scf00069g00161 Petunia axillaris HOM05D002373 ORTHO05D005805 3.4e-27 125.6 105 64.8
Gorai.007G155300 Gossypium raimondii HOM05D002373 ORTHO05D015238 5.8e-27 124.8 88 75.0
Pp3c17_9580 Physcomitrium patens HOM05D002373 ORTHO05D005805 2.9e-26 122.5 105 60.0
Gohir.D01G115250 Gossypium hirsutum HOM05D002373 ORTHO05D015238 6.4e-26 121.3 94 71.3
Gohir.D11G208933 Gossypium hirsutum HOM05D002373 ORTHO05D015238 6.4e-26 121.3 88 71.6
Gorai.013G131500 Gossypium raimondii HOM05D002373 ORTHO05D015238 1.9e-25 119.8 88 70.5
Gohir.D13G116950 Gossypium hirsutum HOM05D002373 ORTHO05D015238 3.2e-25 119.0 88 69.3
Gohir.D04G137250 Gossypium hirsutum HOM05D002373 ORTHO05D015238 1.1e-20 104.0 88 63.6
SEGI_17365 Sequoiadendron giganteum HOM05D002373 ORTHO05D005805 3.1e-20 102.4 108 52.8
CDE10G0423 Ceratophyllum demersum HOM05D002373 ORTHO05D005805 5.1e-15 85.1 59 72.9
BcaB01g00835 Brassica carinata HOM05D002373 ORTHO05D031637 1.8e-12 76.6 59 62.7
Gohir.A01G063200 Gossypium hirsutum HOM05D002373 ORTHO05D005805 7.6e-11 71.2 38 84.2
Actinidia35248 Actinidia chinensis HOM05D002373 ORTHO05D015238 9.3e-09 64.3 36 77.8
CDE10G0842 Ceratophyllum demersum HOM05D002373 ORTHO05D015238 1.6e-08 63.5 144 35.4


User provided reference genes

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