Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G1534 Papaver somniferum HOM05D005768 ORTHO05D007100 6.7e-108 394.0 202 100.0
PSO063G0290 Papaver somniferum HOM05D005768 ORTHO05D007100 3.9e-100 368.2 205 94.6
PSO063G1479 Papaver somniferum HOM05D005768 ORTHO05D007100 9.4e-86 320.5 206 83.0
PSO063G2632 Papaver somniferum HOM05D005768 ORTHO05D007100 9.4e-86 320.5 206 83.0
PSO063G5891 Papaver somniferum HOM05D005768 ORTHO05D007100 9.4e-86 320.5 206 83.0
PSO832G3354 Papaver somniferum HOM05D005768 ORTHO05D007100 8.8e-84 313.9 203 82.3
PSO832G4156 Papaver somniferum HOM05D005768 ORTHO05D007100 6.8e-68 261.2 149 89.3
PSO063G4631 Papaver somniferum HOM05D005768 ORTHO05D007100 1.1e-65 253.8 159 84.9
GSVIVG01035325001 Vitis vinifera HOM05D005768 ORTHO05D007100 1.2e-56 223.8 180 65.6
Dinv27944 Davidia involucrata HOM05D005768 ORTHO05D007100 1.6e-56 223.4 180 65.0
CiPaw.07G201500 Carya illinoinensis HOM05D005768 ORTHO05D007100 3.0e-55 219.2 183 63.9
Manes.02G043100 Manihot esculenta HOM05D005768 ORTHO05D007100 3.0e-55 219.2 185 62.2
TAR624G0371 Trochodendron aralioides HOM05D005768 ORTHO05D007100 3.0e-55 219.2 189 60.8
TAR383G0888 Trochodendron aralioides HOM05D005768 ORTHO05D007100 1.5e-54 216.9 162 68.5
Hma1.2p1_0442F.1_g153950 Hydrangea macrophylla HOM05D005768 ORTHO05D007100 2.5e-54 216.1 180 62.2
RcHm_v2.0_Chr6g0306801 Rosa chinensis HOM05D005768 ORTHO05D007100 3.3e-54 215.7 184 63.0
FAN27G1715 Fragaria x ananassa HOM05D005768 ORTHO05D007100 9.5e-54 214.2 184 62.0
Actinidia18208 Actinidia chinensis HOM05D005768 ORTHO05D007100 1.6e-53 213.4 185 60.5
Thecc.09G049100 Theobroma cacao HOM05D005768 ORTHO05D007100 2.8e-53 212.6 182 62.1
CSS0002565 Camellia sinensis var. sinensis HOM05D005768 ORTHO05D007100 3.6e-53 212.2 181 60.8
Ciclev10022280m.g Citrus clementina HOM05D005768 ORTHO05D007100 3.6e-53 212.2 186 59.7
Atru.chr4.1221 Acer truncatum HOM05D005768 ORTHO05D007100 4.7e-53 211.8 185 61.1
Cc00_g09250 Coffea canephora HOM05D005768 ORTHO05D007100 4.7e-53 211.8 187 58.8
Duzib168G0475 Durio zibethinus HOM05D005768 ORTHO05D007100 1.4e-52 210.3 181 60.8
Atru.chr7.2675 Acer truncatum HOM05D005768 ORTHO05D007100 6.8e-52 208.0 185 61.1
Hma1.2p1_0603F.1_g187720 Hydrangea macrophylla HOM05D005768 ORTHO05D007100 1.2e-51 207.2 159 67.3
Nn6g34840 Nelumbo nucifera HOM05D005768 ORTHO05D007100 1.2e-51 207.2 200 60.5
Aqoxy5G03966 Aquilegia oxysepala HOM05D005768 ORTHO05D007100 2.0e-51 206.5 187 62.0
FAN20G2834 Fragaria x ananassa HOM05D005768 ORTHO05D007100 2.0e-51 206.5 184 60.9
Cpa.g.sc1868.1 Carica papaya HOM05D005768 ORTHO05D007100 9.9e-51 204.1 184 61.4
COL.COLO4_21009 Corchorus olitorius HOM05D005768 ORTHO05D007100 9.9e-51 204.1 180 61.1
Prupe.1G443600 Prunus persica HOM05D005768 ORTHO05D007100 2.2e-50 203.0 181 60.8
TPR.G33208 Trifolium pratense HOM05D005768 ORTHO05D007100 4.9e-50 201.8 187 59.4
Solyc08g066030.3 Solanum lycopersicum HOM05D005768 ORTHO05D007100 6.4e-50 201.4 180 57.8
HanXRQChr03g0078001 Helianthus annuus HOM05D005768 ORTHO05D007100 8.3e-50 201.1 171 57.9
Rhsim07G0145000 Rhododendron simsii HOM05D005768 ORTHO05D007100 8.3e-50 201.1 188 55.9
Sopen08g019690 Solanum pennellii HOM05D005768 ORTHO05D007100 8.3e-50 201.1 181 56.9
Gohir.D07G024000 Gossypium hirsutum HOM05D005768 ORTHO05D007100 1.1e-49 200.7 182 58.2
Gorai.001G024700 Gossypium raimondii HOM05D005768 ORTHO05D007100 1.1e-49 200.7 182 58.2
Eucgr.C02988 Eucalyptus grandis HOM05D005768 ORTHO05D007100 1.4e-49 200.3 188 57.4
vmacro07473 Vaccinium macrocarpon HOM05D005768 ORTHO05D007100 3.2e-49 199.1 187 55.6
Sabra06G0183200 Salix brachista HOM05D005768 ORTHO05D007100 7.1e-49 198.0 166 65.1
Potri.006G234800 Populus trichocarpa HOM05D005768 ORTHO05D007100 1.2e-48 197.2 166 64.5
PGSC0003DMG401025462 Solanum tuberosum HOM05D005768 ORTHO05D007100 1.6e-48 196.8 163 61.3
MELO3C003477.2 Cucumis melo HOM05D005768 ORTHO05D007100 2.7e-48 196.1 184 58.2
Lsat_1_v5_gn_3_56860 Lactuca sativa HOM05D005768 ORTHO05D007100 2.7e-48 196.1 156 63.5
TWI34G0524 Tripterygium wilfordii HOM05D005768 ORTHO05D007100 3.5e-48 195.7 164 61.0
Lalb_Chr24g0397251 Lupinus albus HOM05D005768 ORTHO05D007100 4.6e-48 195.3 185 56.8
TPR.G29192 Trifolium pratense HOM05D005768 ORTHO05D007100 1.0e-47 194.1 173 60.7
Medtr7g112710 Medicago truncatula HOM05D005768 ORTHO05D007100 1.3e-47 193.7 171 61.4
Sed0000338 Sechium edule HOM05D005768 ORTHO05D007100 1.7e-47 193.4 187 57.2
Aqoxy7G01356 Aquilegia oxysepala HOM05D005768 ORTHO05D007100 2.3e-47 193.0 194 56.2
CANSAT56G2391 Cannabis sativa HOM05D005768 ORTHO05D007100 2.3e-47 193.0 186 56.5
TWI63G1351 Tripterygium wilfordii HOM05D005768 ORTHO05D007100 8.6e-47 191.0 186 53.8
Psat0s1830g0160 Pisum sativum HOM05D005768 ORTHO05D007100 1.1e-46 190.7 187 58.3
Glyma.19G233100 Glycine max HOM05D005768 ORTHO05D007100 1.5e-46 190.3 185 58.9
CsaV3_3G048420 Cucumis sativus L. HOM05D005768 ORTHO05D007100 1.9e-46 189.9 184 56.0
MD08G1109000 Malus domestica HOM05D005768 ORTHO05D007100 1.9e-46 189.9 190 57.4
EL10Ac5g12654 Beta vulgaris HOM05D005768 ORTHO05D007100 3.3e-46 189.1 176 58.0
Lj1g0020400 Lotus japonicus HOM05D005768 ORTHO05D007100 4.3e-46 188.7 192 55.2
Ah.02g116310 Amaranthus hybridus HOM05D005768 ORTHO05D007100 5.6e-46 188.3 165 59.4
Haze_01966 Corylus avellana HOM05D005768 ORTHO05D007100 5.6e-46 188.3 144 66.0
Psat0s1830g0280 Pisum sativum HOM05D005768 ORTHO05D007100 2.8e-45 186.0 187 55.6
Nitab4.5_0000318g0060 Nicotiana tabacum HOM05D005768 ORTHO05D007100 4.7e-45 185.3 162 61.1
AUR62017359 Chenopodium quinoa HOM05D005768 ORTHO05D007100 6.2e-45 184.9 163 60.1
Lalb_Chr08g0242881 Lupinus albus HOM05D005768 ORTHO05D007100 8.1e-45 184.5 185 55.7
SGA_v2.0_scaffold103G30048 Striga asiatica HOM05D005768 ORTHO05D007100 1.8e-44 183.3 153 62.7
AUR62010536 Chenopodium quinoa HOM05D005768 ORTHO05D007100 2.4e-44 183.0 161 59.6
PGR044G0118 Punica granatum HOM05D005768 ORTHO05D007100 2.4e-44 183.0 190 52.1
Migut.A00171 Erythranthe guttata HOM05D005768 ORTHO05D007100 3.1e-44 182.6 184 56.0
QL12p040865 Quercus lobata HOM05D005768 ORTHO05D007100 5.2e-44 181.8 264 43.6
Peaxi162Scf00699g00655 Petunia axillaris HOM05D005768 ORTHO05D007100 6.8e-44 181.4 153 61.4
FAN15G1520 Fragaria x ananassa HOM05D005768 ORTHO05D007100 8.9e-44 181.0 158 61.4
arahy.Tifrunner.gnm1.ann1.FJ9VJT Arachis hypogaea HOM05D005768 ORTHO05D007100 1.2e-43 180.6 166 57.2
Sed0022019 Sechium edule HOM05D005768 ORTHO05D007100 2.6e-43 179.5 184 55.4
THA.LOC104812009 Tarenaya hassleriana HOM05D005768 ORTHO05D007100 2.6e-43 179.5 193 53.4
Phvul.006G089400 Phaseolus vulgaris HOM05D005768 ORTHO05D007100 3.4e-43 179.1 166 59.6
SalBow6G5216 Salvia bowleyana HOM05D005768 ORTHO05D007100 7.6e-43 177.9 159 57.9
Sc09g0009490 Simmondsia chinensis HOM05D005768 ORTHO05D007100 2.2e-42 176.4 196 51.5
Os03g0804100 Oryza sativa ssp. japonica HOM05D005768 ORTHO05D007100 6.4e-42 174.9 165 56.4
CARHR021320 Cardamine hirsuta HOM05D005768 ORTHO05D007100 1.1e-41 174.1 184 52.2
ECA234G0765 Erigeron canadensis HOM05D000185 ORTHO05D000105 1.1e-41 174.1 163 57.7
AT1G20890 Arabidopsis thaliana HOM05D005768 ORTHO05D007100 1.4e-41 173.7 183 51.9
BcaB03g14295 Brassica carinata HOM05D005768 ORTHO05D007100 1.4e-41 173.7 187 52.9
Sp1g18590 Schrenkiella parvula HOM05D005768 ORTHO05D007100 1.4e-41 173.7 183 52.5
MSTRG.25924 Avicennia marina HOM05D005768 ORTHO05D007100 2.4e-41 172.9 145 61.4
vmacro05269 Vaccinium macrocarpon HOM05D005768 ORTHO05D007100 7.1e-41 171.4 164 56.1
Aa31LG7G5050 Aethionema arabicum HOM05D005768 ORTHO05D007100 1.6e-40 170.2 183 50.8
AL1G33910 Arabidopsis lyrata HOM05D005768 ORTHO05D007100 2.1e-40 169.9 185 50.8
BcaB07g32084 Brassica carinata HOM05D005768 ORTHO05D007100 2.7e-40 169.5 186 52.7
Thhalv10008823m.g Eutrema salsugineum HOM05D005768 ORTHO05D007100 2.7e-40 169.5 186 50.5
Zm00001eb061390 Zea mays HOM05D005768 ORTHO05D007100 4.6e-40 168.7 161 55.3
BcaC06g34845 Brassica carinata HOM05D005768 ORTHO05D007100 6.0e-40 168.3 163 55.8
Os08g0374900 Oryza sativa ssp. japonica HOM05D005768 ORTHO05D007100 6.0e-40 168.3 164 53.7
A07p15420 Brassica napus HOM05D005768 ORTHO05D007100 1.7e-39 166.8 183 51.4
SEGI_27706 Sequoiadendron giganteum HOM05D005768 ORTHO05D007100 1.7e-39 166.8 194 49.0
Nitab4.5_0002021g0070 Nicotiana tabacum HOM05D005768 ORTHO05D007100 6.6e-39 164.9 143 60.1
Gohir.A07G022184 Gossypium hirsutum HOM05D005768 ORTHO05D007100 1.5e-38 163.7 140 61.4
Carub.0001s2036 Capsella rubella HOM05D005768 ORTHO05D007100 2.5e-38 162.9 183 48.1
AT1G76480 Arabidopsis thaliana HOM05D005768 ORTHO05D007100 5.6e-38 161.8 201 46.8
unitig_0.g2567 Utricularia gibba HOM05D005768 ORTHO05D007100 9.9e-35 151.0 157 51.6
Lj7A696G17 Lonicera japonica HOM05D005768 ORTHO05D007100 1.1e-33 147.5 182 50.0
Oeu033885.1 Olea europaea HOM05D005768 ORTHO05D007100 1.9e-33 146.7 140 57.9
Hund19578 Selenicereus undatus HOM05D005768 ORTHO05D007100 7.8e-32 141.4 120 60.8
MBI02_g46987_MAGBIO Magnolia biondii HOM05D005768 ORTHO05D007100 1.5e-30 137.1 100 70.0
C07p22730 Brassica napus HOM05D005768 ORTHO05D007100 5.6e-30 135.2 144 53.5
AL2G36620 Arabidopsis lyrata HOM05D005768 ORTHO05D007100 9.6e-30 134.4 185 45.9
A06p16890 Brassica napus HOM05D005768 ORTHO05D007100 9.6e-30 134.4 127 55.9
BolC7t42805H Brassica oleracea HOM05D005768 ORTHO05D007100 9.6e-30 134.4 143 51.7
MBI02_g46884_MAGBIO Magnolia biondii HOM05D000614 ORTHO05D007100 4.8e-29 132.1 120 60.0
BraA06t24798Z Brassica rapa HOM05D005768 ORTHO05D007100 6.2e-29 131.7 183 44.8
ATR0693G003 Amborella trichopoda HOM05D005768 ORTHO05D007100 8.1e-29 131.3 165 46.7
Ca_05797_v3 Cicer arietinum L. HOM05D001134 ORTHO05D001035 6.9e-28 128.3 124 60.5
FvH4_2g35150 Fragaria vesca HOM05D005768 ORTHO05D007100 6.9e-28 128.3 108 62.0
Glyma.03G235400 Glycine max HOM05D005768 ORTHO05D007100 3.4e-27 125.9 137 56.2
C05p19520 Brassica napus HOM05D005768 ORTHO05D007100 4.5e-27 125.6 176 44.3
BolC5t30654H Brassica oleracea HOM05D005768 ORTHO05D007100 4.5e-27 125.6 176 44.3
SalBow4G3076 Salvia bowleyana HOM05D005768 ORTHO05D007100 1.3e-26 124.0 172 43.6
ClCG02G014210 Citrullus lanatus HOM05D005768 ORTHO05D007100 3.8e-26 122.5 110 60.9
HPP92_009604 Vanilla planifolia HOM05D005768 ORTHO05D007100 7.1e-25 118.2 147 44.9
Mapoly0062s0068 Marchantia polymorpha HOM05D005768 ORTHO05D007100 1.8e-23 113.6 200 39.0
Pp3c24_1520 Physcomitrium patens HOM05D005768 ORTHO05D007100 5.1e-23 112.1 199 37.7
Thhalv10019630m.g Eutrema salsugineum HOM05D005768 ORTHO05D007100 8.7e-23 111.3 143 45.5
Sc09g0009510 Simmondsia chinensis HOM05D005768 ORTHO05D007100 3.2e-17 92.8 74 63.5
CDE02G0943 Ceratophyllum demersum HOM05D005768 ORTHO05D007100 2.7e-16 89.7 98 49.0
HanXRQChr14g0439211 Helianthus annuus HOM05D005768 ORTHO05D007100 1.1e-14 84.3 81 55.6
Oeu002722.1 Olea europaea HOM05D005768 ORTHO05D007100 3.7e-13 79.3 67 62.7
SEGI_03586 Sequoiadendron giganteum HOM05D005768 ORTHO05D007100 2.2e-10 70.1 45 71.1
DCAR_003074 Daucus carota HOM05D001613 ORTHO05D001556 5.0e-10 68.9 75 53.3
Cre12.g547734 Chlamydomonas reinhardtii HOM05D005768 ORTHO05D007100 6.5e-10 68.6 152 35.5
CBR_g130 Chara braunii HOM05D000019 ORTHO05D000002 2.5e-09 66.6 175 29.1
ClCG11G015010 Citrullus lanatus HOM05D005768 ORTHO05D007100 1.6e-08 63.9 101 41.6
BcaC05g25998 Brassica carinata HOM05D005768 ORTHO05D007100 2.7e-08 63.2 56 51.8
MCO02G048 Micromonas commoda HOM05D005768 ORTHO05D007100 3.3e-06 56.2 150 32.0


User provided reference genes

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