Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G1393 Papaver somniferum HOM05D007091 ORTHO05D008768 2.1e-49 198.7 101 100.0
PSO421G0160 Papaver somniferum HOM05D007091 ORTHO05D008768 5.1e-24 114.4 87 70.1
PSO384G3314 Papaver somniferum HOM05D007091 ORTHO05D008768 4.8e-22 107.8 89 67.4
arahy.Tifrunner.gnm1.ann1.0PBM2M Arachis hypogaea HOM05D007091 ORTHO05D008768 9.4e-18 93.6 89 57.3
Ciclev10026363m.g Citrus clementina HOM05D007091 ORTHO05D008768 1.2e-17 93.2 93 57.0
Lalb_Chr22g0353631 Lupinus albus HOM05D007091 ORTHO05D008768 1.2e-17 93.2 93 57.0
Hma1.2p1_0844F.1_g227450 Hydrangea macrophylla HOM05D007091 ORTHO05D008768 2.1e-17 92.4 93 57.0
arahy.Tifrunner.gnm1.ann1.M1K315 Arachis hypogaea HOM05D007091 ORTHO05D008768 4.7e-17 91.3 89 56.2
Cfa020656 Carpinus fangiana HOM05D007091 ORTHO05D008768 7.9e-17 90.5 93 54.8
Phvul.004G146400 Phaseolus vulgaris HOM05D007091 ORTHO05D008768 2.3e-16 89.0 91 57.1
Dinv32110 Davidia involucrata HOM05D007091 ORTHO05D008768 3.0e-16 88.6 93 55.9
TPR.G31708 Trifolium pratense HOM05D007091 ORTHO05D008768 3.0e-16 88.6 91 54.9
Atru.chr9.1636 Acer truncatum HOM05D007091 ORTHO05D008768 3.9e-16 88.2 93 55.9
Manes.14G173700 Manihot esculenta HOM05D007091 ORTHO05D008768 5.1e-16 87.8 91 56.0
VMungo0464G0064 Vigna mungo HOM05D007091 ORTHO05D008768 5.1e-16 87.8 90 56.7
Dinv01447 Davidia involucrata HOM05D007091 ORTHO05D008768 6.7e-16 87.4 93 55.9
Glyma.09G170700 Glycine max HOM05D007091 ORTHO05D008768 6.7e-16 87.4 91 54.9
Actinidia34668 Actinidia chinensis HOM05D007091 ORTHO05D008768 8.8e-16 87.0 103 50.5
Aqoxy3G04057 Aquilegia oxysepala HOM05D007091 ORTHO05D008768 8.8e-16 87.0 95 56.8
Potri.012G041400 Populus trichocarpa HOM05D007091 ORTHO05D008768 8.8e-16 87.0 93 53.8
vmacro18668 Vaccinium macrocarpon HOM05D007091 ORTHO05D008768 8.8e-16 87.0 103 50.5
Ca_20293_v3 Cicer arietinum L. HOM05D007091 ORTHO05D008768 1.1e-15 86.7 91 53.8
Peaxi162Scf01064g00022 Petunia axillaris HOM05D007091 ORTHO05D008768 1.1e-15 86.7 89 53.9
QL09p036643 Quercus lobata HOM05D007091 ORTHO05D008768 1.1e-15 86.7 93 53.8
Sopen06g028870 Solanum pennellii HOM05D007091 ORTHO05D008768 1.1e-15 86.7 89 52.8
MSTRG.11241 Avicennia marina HOM05D007091 ORTHO05D008768 1.5e-15 86.3 93 53.8
Gohir.D11G227400 Gossypium hirsutum HOM05D007091 ORTHO05D008768 1.5e-15 86.3 93 53.8
Gorai.007G246600 Gossypium raimondii HOM05D007091 ORTHO05D008768 1.5e-15 86.3 93 53.8
Sabra12G0028500 Salix brachista HOM05D007091 ORTHO05D008768 1.5e-15 86.3 93 53.8
SEGI_35239 Sequoiadendron giganteum HOM05D007091 ORTHO05D008768 1.5e-15 86.3 93 52.7
TAR629G3120 Trochodendron aralioides HOM05D007091 ORTHO05D008768 1.5e-15 86.3 93 51.6
CSS0046666 Camellia sinensis var. sinensis HOM05D007091 ORTHO05D008768 2.0e-15 85.9 103 52.4
CAN.G65.99 Capsicum annuum HOM05D007091 ORTHO05D008768 2.0e-15 85.9 89 52.8
Duzib264G1108 Durio zibethinus HOM05D007091 ORTHO05D008768 2.0e-15 85.9 93 52.7
MD14G1240800 Malus domestica HOM05D007091 ORTHO05D008768 2.6e-15 85.5 91 54.9
Nitab4.5_0000033g0140 Nicotiana tabacum HOM05D007091 ORTHO05D008768 2.6e-15 85.5 89 52.8
Solyc06g072500.2 Solanum lycopersicum HOM05D007091 ORTHO05D008768 2.6e-15 85.5 89 51.7
CiPaw.15G149800 Carya illinoinensis HOM05D007091 ORTHO05D008768 3.3e-15 85.1 93 51.6
FvH4_5g17800 Fragaria vesca HOM05D007091 ORTHO05D008768 4.4e-15 84.7 91 54.9
Nn4g24542 Nelumbo nucifera HOM05D007091 ORTHO05D008768 5.7e-15 84.3 93 52.7
FAN13G0023 Fragaria x ananassa HOM05D007091 ORTHO05D008768 7.4e-15 84.0 91 53.8
Gohir.A11G233700 Gossypium hirsutum HOM05D007091 ORTHO05D008768 7.4e-15 84.0 93 53.8
Eucgr.H00567 Eucalyptus grandis HOM05D007091 ORTHO05D008768 9.7e-15 83.6 93 52.7
Nitab4.5_0005533g0060 Nicotiana tabacum HOM05D007091 ORTHO05D008768 9.7e-15 83.6 89 51.7
TWI15G0826 Tripterygium wilfordii HOM05D007091 ORTHO05D008768 9.7e-15 83.6 93 52.7
Lj2g0019861 Lotus japonicus HOM05D007091 ORTHO05D008768 1.3e-14 83.2 91 53.8
RcHm_v2.0_Chr7g0177781 Rosa chinensis HOM05D007091 ORTHO05D008768 1.3e-14 83.2 91 53.8
Thecc.03G065800 Theobroma cacao HOM05D007091 ORTHO05D008768 1.3e-14 83.2 93 50.5
ATR0598G099 Amborella trichopoda HOM05D007091 ORTHO05D008768 2.2e-14 82.4 91 51.6
Migut.I00575 Erythranthe guttata HOM05D007091 ORTHO05D008768 2.2e-14 82.4 93 53.8
Prupe.5G238600 Prunus persica HOM05D007091 ORTHO05D008768 2.8e-14 82.0 91 53.8
AUR62022670 Chenopodium quinoa HOM05D007091 ORTHO05D008768 4.8e-14 81.3 91 52.7
Lsat_1_v5_gn_2_11841 Lactuca sativa HOM05D007091 ORTHO05D008768 4.8e-14 81.3 96 51.0
SEGI_03292 Sequoiadendron giganteum HOM05D007091 ORTHO05D008768 4.8e-14 81.3 93 50.5
COL.COLO4_24457 Corchorus olitorius HOM05D007091 ORTHO05D008768 6.3e-14 80.9 93 49.5
HanXRQChr06g0179681 Helianthus annuus HOM05D007091 ORTHO05D008768 6.3e-14 80.9 96 53.1
MD06G1234100 Malus domestica HOM05D007091 ORTHO05D008768 6.3e-14 80.9 91 52.7
Medtr6g072100 Medicago truncatula HOM05D007091 ORTHO05D008768 6.3e-14 80.9 91 51.6
GSVIVG01000383001 Vitis vinifera HOM05D007091 ORTHO05D008768 6.3e-14 80.9 91 51.6
EL10Ac1g00193 Beta vulgaris HOM05D007091 ORTHO05D008768 1.1e-13 80.1 91 51.6
Zm00001eb256360 Zea mays HOM05D007091 ORTHO05D008768 1.1e-13 80.1 91 53.8
BcaB03g12975 Brassica carinata HOM05D007091 ORTHO05D008768 1.4e-13 79.7 92 51.1
A08p30440 Brassica napus HOM05D007091 ORTHO05D008768 1.4e-13 79.7 92 51.1
BraA08t34976Z Brassica rapa HOM05D007091 ORTHO05D008768 1.4e-13 79.7 92 51.1
Mapoly0049s0094 Marchantia polymorpha HOM05D007091 ORTHO05D008768 1.4e-13 79.7 93 53.8
Sp1g16300 Schrenkiella parvula HOM05D007091 ORTHO05D008768 1.4e-13 79.7 93 52.7
Aa31LG7G2780 Aethionema arabicum HOM05D007091 ORTHO05D008768 1.8e-13 79.3 92 51.1
ECA238G0701 Erigeron canadensis HOM05D007091 ORTHO05D008768 1.8e-13 79.3 96 51.0
BcaC07g38895 Brassica carinata HOM05D007091 ORTHO05D008768 3.1e-13 78.6 92 52.2
C08p18530 Brassica napus HOM05D007091 ORTHO05D008768 3.1e-13 78.6 92 52.2
SHI19106 Sapria himalayana HOM05D007091 ORTHO05D008768 3.1e-13 78.6 93 50.5
Cc04_g09250 Coffea canephora HOM05D007091 ORTHO05D008768 4.1e-13 78.2 92 50.0
HPP92_007322 Vanilla planifolia HOM05D007091 ORTHO05D008768 4.1e-13 78.2 103 48.5
BolC8t49485H Brassica oleracea HOM05D007091 ORTHO05D008768 5.3e-13 77.8 92 51.1
Pp3c17_14350 Physcomitrium patens HOM05D007091 ORTHO05D008768 5.3e-13 77.8 94 50.0
BcaNung05442 Brassica carinata HOM05D005614 ORTHO05D006759 7.0e-13 77.4 93 50.5
Os05g0387800 Oryza sativa ssp. japonica HOM05D007091 ORTHO05D008768 7.0e-13 77.4 93 51.6
AUR62004555 Chenopodium quinoa HOM05D007091 ORTHO05D008768 9.1e-13 77.0 91 50.5
Thhalv10008624m.g Eutrema salsugineum HOM05D007091 ORTHO05D008768 1.2e-12 76.6 92 51.1
DCAR_004559 Daucus carota HOM05D007091 ORTHO05D009263 1.6e-12 76.3 114 49.1
Sc10g0009000 Simmondsia chinensis HOM05D007091 ORTHO05D008768 1.6e-12 76.3 103 49.5
SMO347G0535 Selaginella moellendorffii HOM05D007091 ORTHO05D008768 2.0e-12 75.9 92 51.1
CDE07G0316 Ceratophyllum demersum HOM05D007091 ORTHO05D008768 2.6e-12 75.5 93 46.2
AT1G18335 Arabidopsis thaliana HOM05D007091 ORTHO05D008768 4.5e-12 74.7 92 50.0
CARHR018920 Cardamine hirsuta HOM05D007091 ORTHO05D008768 5.9e-12 74.3 89 50.6
Carub.0001s1796 Capsella rubella HOM05D007091 ORTHO05D008768 1.0e-11 73.6 102 48.0
Haze_18937 Corylus avellana HOM05D007091 ORTHO05D008768 1.7e-11 72.8 71 53.5
FAN04G2000 Fragaria x ananassa HOM05D007091 ORTHO05D008768 2.2e-11 72.4 66 59.1
AL1G30710 Arabidopsis lyrata HOM05D007091 ORTHO05D008768 2.9e-11 72.0 92 48.9
ClCG04G012810 Citrullus lanatus HOM05D007091 ORTHO05D008768 5.0e-11 71.2 93 46.2
MELO3C001924.2 Cucumis melo HOM05D007091 ORTHO05D008768 8.5e-11 70.5 93 45.2
CsaV3_1G004900 Cucumis sativus L. HOM05D007091 ORTHO05D008768 8.5e-11 70.5 93 45.2
CANSAT35G2054 Cannabis sativa HOM05D007091 ORTHO05D008768 1.5e-10 69.7 92 46.7
Oeu058744.1 Olea europaea HOM05D007091 ORTHO05D008768 1.2e-09 66.6 58 60.3
Atru.chr9.1624 Acer truncatum HOM05D007091 ORTHO05D008768 1.6e-09 66.2 68 55.9
SGA_v2.0_scaffold40G15610 Striga asiatica HOM05D007091 ORTHO05D008768 1.0e-08 63.5 58 56.9
PGSC0003DMG401027044 Solanum tuberosum HOM05D007091 ORTHO05D008768 1.4e-08 63.2 60 55.0
Pp3c9_11360 Physcomitrium patens HOM05D000137 ORTHO05D000382 2.3e-08 62.4 92 42.4
Psat1g124480 Pisum sativum HOM05D007091 ORTHO05D008768 2.3e-08 62.4 60 56.7
C02p62570 Brassica napus HOM05D001735 ORTHO05D001640 8.8e-08 60.5 58 53.4
AagrBONN_evm.TU.Sc2ySwM_228.1246 Anthoceros agrestis HOM05D007091 ORTHO05D008768 2.6e-07 58.9 62 46.8
Lj9P415T25 Lonicera japonica HOM05D007091 ORTHO05D008768 7.5e-07 57.4 60 53.3
Os02g0772300 Oryza sativa ssp. japonica HOM05D007091 ORTHO05D008768 9.7e-07 57.0 61 50.8
Pp3c15_11610 Physcomitrium patens HOM05D000137 ORTHO05D008768 1.3e-06 56.6 92 39.1
CBR_g40646 Chara braunii HOM05D007091 ORTHO05D008768 2.8e-06 55.5 94 39.4


User provided reference genes

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