Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G1209 Papaver somniferum HOM05D002915 ORTHO05D003004 4.7e-117 424.5 206 100.0
PSO832G1590 Papaver somniferum HOM05D002915 ORTHO05D003004 9.9e-99 363.6 201 90.5
PSO384G2811 Papaver somniferum HOM05D002915 ORTHO05D003004 3.0e-47 192.6 194 49.0
PSO384G3355 Papaver somniferum HOM05D002915 ORTHO05D003004 3.0e-47 192.6 194 49.0
PSO339G6727 Papaver somniferum HOM05D002915 ORTHO05D003004 2.0e-46 189.9 194 50.5
TAR629G0865 Trochodendron aralioides HOM05D002915 ORTHO05D003004 6.1e-32 141.7 202 41.1
TAR629G0058 Trochodendron aralioides HOM05D002915 ORTHO05D003004 6.8e-31 138.3 201 40.8
TAR629G2135 Trochodendron aralioides HOM05D002915 ORTHO05D003004 4.9e-29 132.1 206 38.3
CSS0045033 Camellia sinensis var. sinensis HOM05D002915 ORTHO05D003004 1.8e-28 130.2 206 37.9
vmacro16134 Vaccinium macrocarpon HOM05D002915 ORTHO05D003004 5.4e-28 128.6 202 37.6
Rhsim12G0105400 Rhododendron simsii HOM05D002915 ORTHO05D003004 9.2e-28 127.9 192 39.6
Aqoxy1G01229 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 3.5e-27 125.9 198 35.9
Rhsim12G0105300 Rhododendron simsii HOM05D002915 ORTHO05D003004 7.8e-27 124.8 202 38.1
Dinv14798 Davidia involucrata HOM05D002915 ORTHO05D003004 3.8e-26 122.5 203 36.0
Hma1.2p1_0167F.1_g073810 Hydrangea macrophylla HOM05D002915 ORTHO05D003004 3.8e-26 122.5 204 36.8
CiPaw.06G099700 Carya illinoinensis HOM05D002915 ORTHO05D003004 8.6e-26 121.3 207 38.2
Haze_24934 Corylus avellana HOM05D002915 ORTHO05D003004 1.5e-25 120.6 208 33.7
Aqoxy4G02244 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 4.3e-25 119.0 198 33.8
Rhsim02G0221300 Rhododendron simsii HOM05D002915 ORTHO05D003004 9.5e-25 117.9 202 37.1
Cfa002665 Carpinus fangiana HOM05D002915 ORTHO05D003004 1.6e-24 117.1 207 32.4
Rhsim13G0213700 Rhododendron simsii HOM05D002915 ORTHO05D003004 1.6e-24 117.1 202 36.1
CiPaw.05G115500 Carya illinoinensis HOM05D002915 ORTHO05D003004 3.6e-24 115.9 211 33.6
CiPaw.05G115300 Carya illinoinensis HOM05D002915 ORTHO05D003004 4.7e-24 115.5 211 34.1
CiPaw.05G115400 Carya illinoinensis HOM05D002915 ORTHO05D003004 4.7e-24 115.5 211 34.1
Lj6A821T72 Lonicera japonica HOM05D002915 ORTHO05D003004 4.7e-24 115.5 212 34.9
Manes.12G014800 Manihot esculenta HOM05D002915 ORTHO05D003004 1.4e-23 114.0 215 34.9
Manes.12G023850 Manihot esculenta HOM05D002915 ORTHO05D003004 3.0e-23 112.8 213 35.7
Actinidia25760 Actinidia chinensis HOM05D002915 ORTHO05D003004 8.9e-23 111.3 202 37.6
Gorai.007G046700 Gossypium raimondii HOM05D002915 ORTHO05D003004 8.9e-23 111.3 207 34.3
Gohir.A11G040100 Gossypium hirsutum HOM05D002915 ORTHO05D003004 3.4e-22 109.4 203 35.0
Potri.013G008800 Populus trichocarpa HOM05D002915 ORTHO05D003004 4.4e-22 109.0 196 32.7
Hund03449 Selenicereus undatus HOM05D002915 ORTHO05D003004 4.4e-22 109.0 200 33.0
HanXRQChr05g0131161 Helianthus annuus HOM05D002915 ORTHO05D003004 7.5e-22 108.2 193 33.7
Manes.11G084185 Manihot esculenta HOM05D002915 ORTHO05D003004 2.9e-21 106.3 222 32.0
Atru.chr11.2288 Acer truncatum HOM05D002915 ORTHO05D003004 3.7e-21 105.9 196 33.7
Aqoxy1G00479 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 4.9e-21 105.5 192 31.2
MD16G1169500 Malus domestica HOM05D002915 ORTHO05D003004 8.3e-21 104.8 210 34.3
Oeu033490.1 Olea europaea HOM05D002915 ORTHO05D003004 8.3e-21 104.8 196 35.7
Sabra13G0007400 Salix brachista HOM05D002915 ORTHO05D003004 8.3e-21 104.8 195 32.8
TWI09G1418 Tripterygium wilfordii HOM05D002915 ORTHO05D003004 1.4e-20 104.0 198 34.3
Manes.13G015600 Manihot esculenta HOM05D002915 ORTHO05D003004 1.8e-20 103.6 216 31.9
Cc02_g04260 Coffea canephora HOM05D002915 ORTHO05D003004 2.4e-20 103.2 197 29.9
QL03p054762 Quercus lobata HOM05D002915 ORTHO05D003004 2.4e-20 103.2 205 32.2
Gohir.D11G043350 Gossypium hirsutum HOM05D002915 ORTHO05D003004 4.1e-20 102.4 197 34.0
PGR142G3351 Punica granatum HOM05D002915 ORTHO05D003004 4.1e-20 102.4 191 33.0
Atru.chr1.711 Acer truncatum HOM05D002915 ORTHO05D003004 9.2e-20 101.3 191 33.0
Atru.chr1.712 Acer truncatum HOM05D002915 ORTHO05D003004 1.6e-19 100.5 195 33.3
HanXRQChr08g0207481 Helianthus annuus HOM05D002915 ORTHO05D003004 4.6e-19 99.0 201 34.3
Ciclev10006753m.g Citrus clementina HOM05D002915 ORTHO05D003004 1.7e-18 97.1 159 34.6
Migut.F00476 Erythranthe guttata HOM05D002915 ORTHO05D003004 1.7e-18 97.1 188 34.0
Lj1g0003622 Lotus japonicus HOM05D002915 ORTHO05D003004 2.3e-18 96.7 206 35.0
Lalb_Chr13g0303601 Lupinus albus HOM05D002915 ORTHO05D003004 3.0e-18 96.3 202 31.2
CsaV3_1G004340 Cucumis sativus L. HOM05D002915 ORTHO05D003004 6.6e-18 95.1 200 30.0
DCAR_018111 Daucus carota HOM05D002915 ORTHO05D003004 6.6e-18 95.1 194 31.4
Sopen06g010910 Solanum pennellii HOM05D000025 ORTHO05D000136 6.6e-18 95.1 210 31.9
Cc00_g21400 Coffea canephora HOM05D002915 ORTHO05D003004 1.1e-17 94.4 197 30.5
Lj2g0026934 Lotus japonicus HOM05D002915 ORTHO05D003004 1.1e-17 94.4 197 33.0
Migut.C00066 Erythranthe guttata HOM05D002915 ORTHO05D003004 1.5e-17 94.0 188 31.9
Cc03_g08730 Coffea canephora HOM05D002915 ORTHO05D003004 1.9e-17 93.6 153 36.6
Glyma.07G247800 Glycine max HOM05D002915 ORTHO05D003004 1.9e-17 93.6 197 29.9
Lsat_1_v5_gn_8_150181 Lactuca sativa HOM05D000825 ORTHO05D003684 2.5e-17 93.2 108 46.3
CSS0048418 Camellia sinensis var. sinensis HOM05D002915 ORTHO05D003004 7.3e-17 91.7 190 31.6
Medtr4g119850 Medicago truncatula HOM05D002915 ORTHO05D003004 7.3e-17 91.7 208 29.8
Atru.chr11.2244 Acer truncatum HOM05D002915 ORTHO05D003004 9.5e-17 91.3 197 30.5
Atru.chr11.2259 Acer truncatum HOM05D002915 ORTHO05D003004 9.5e-17 91.3 197 30.5
FAN19G1392 Fragaria x ananassa HOM05D002915 ORTHO05D003004 9.5e-17 91.3 201 31.3
Cc05_g03590 Coffea canephora HOM05D002915 ORTHO05D003004 1.2e-16 90.9 169 33.1
PGSC0003DMG400021580 Solanum tuberosum HOM05D002915 ORTHO05D003004 1.6e-16 90.5 213 30.0
DCAR_016182 Daucus carota HOM05D002915 ORTHO05D003004 2.1e-16 90.1 207 29.0
Lj2g0014982 Lotus japonicus HOM05D002915 ORTHO05D003004 3.6e-16 89.4 191 30.4
Migut.H01084 Erythranthe guttata HOM05D002915 ORTHO05D003004 4.7e-16 89.0 188 31.9
Lj6A815T43 Lonicera japonica HOM05D002915 ORTHO05D003004 4.7e-16 89.0 211 29.4
Psat0s1573g0120 Pisum sativum HOM05D002915 ORTHO05D003004 4.7e-16 89.0 209 31.1
CAN.G1143.27 Capsicum annuum HOM05D002915 ORTHO05D003004 6.2e-16 88.6 207 28.0
Migut.C00063 Erythranthe guttata HOM05D002915 ORTHO05D003004 6.2e-16 88.6 188 30.3
FAN26G0404 Fragaria x ananassa HOM05D002915 ORTHO05D003004 8.0e-16 88.2 201 29.9
Lj4g0008862 Lotus japonicus HOM05D002915 ORTHO05D003004 8.0e-16 88.2 206 29.6
Lalb_Chr18g0050831 Lupinus albus HOM05D002915 ORTHO05D003004 8.0e-16 88.2 201 30.3
Potri.001G321400 Populus trichocarpa HOM05D002915 ORTHO05D003004 8.0e-16 88.2 176 33.0
SGA_v2.0_scaffold169G38697 Striga asiatica HOM05D002915 ORTHO05D003004 8.0e-16 88.2 202 27.7
Lj6g0013707 Lotus japonicus HOM05D002915 ORTHO05D003004 1.1e-15 87.8 200 33.0
Lj4g0001673 Lotus japonicus HOM05D002915 ORTHO05D003004 1.4e-15 87.4 205 33.2
Lj6g0019512 Lotus japonicus HOM05D002915 ORTHO05D003004 1.4e-15 87.4 200 32.5
RcHm_v2.0_Chr4g0422141 Rosa chinensis HOM05D002915 ORTHO05D003004 1.4e-15 87.4 204 29.4
Lj3g0011377 Lotus japonicus HOM05D002915 ORTHO05D003004 1.8e-15 87.0 197 31.0
Medtr5g033770 Medicago truncatula HOM05D002915 ORTHO05D003004 4.0e-15 85.9 206 32.0
PSO782G5303 Papaver somniferum HOM05D002915 ORTHO05D003004 6.8e-15 85.1 140 36.4
Cc00_g09710 Coffea canephora HOM05D002915 ORTHO05D003004 8.9e-15 84.7 145 33.1
Psat4g025920 Pisum sativum HOM05D002915 ORTHO05D003004 8.9e-15 84.7 203 28.6
DCAR_018110 Daucus carota HOM05D002915 ORTHO05D003004 1.2e-14 84.3 194 32.5
Lj3g0023229 Lotus japonicus HOM05D002915 ORTHO05D003004 1.2e-14 84.3 203 31.0
Migut.F00575 Erythranthe guttata HOM05D002915 ORTHO05D003004 2.6e-14 83.2 176 32.4
Lj4g0014849 Lotus japonicus HOM05D002915 ORTHO05D003004 2.6e-14 83.2 200 31.5
Lalb_Chr10g0105601 Lupinus albus HOM05D002915 ORTHO05D003004 3.4e-14 82.8 201 28.4
Psat0s3757g0040 Pisum sativum HOM05D002915 ORTHO05D003004 4.4e-14 82.4 189 30.2
ECA233G1149 Erigeron canadensis HOM05D000825 ORTHO05D003004 5.8e-14 82.0 96 44.8
Ciclev10033456m.g Citrus clementina HOM05D002915 ORTHO05D003004 9.8e-14 81.3 132 40.2
Nn1g09544 Nelumbo nucifera HOM05D002915 ORTHO05D003004 1.3e-13 80.9 199 30.7
TPR.G23884 Trifolium pratense HOM05D002915 ORTHO05D003004 1.3e-13 80.9 200 32.0
Lj5g0016376 Lotus japonicus HOM05D002915 ORTHO05D003004 1.7e-13 80.5 197 31.0
FAN23G0131 Fragaria x ananassa HOM05D002915 ORTHO05D003004 2.9e-13 79.7 176 31.8
Lj5g0020165 Lotus japonicus HOM05D002915 ORTHO05D003004 2.9e-13 79.7 197 31.5
MELO3C011803.2 Cucumis melo HOM05D002915 ORTHO05D003004 3.7e-13 79.3 198 27.3
MELO3C029741.2 Cucumis melo HOM05D002915 ORTHO05D003004 4.9e-13 79.0 200 28.5
Lj4g0025234 Lotus japonicus HOM05D002915 ORTHO05D003004 4.9e-13 79.0 207 30.9
Lj5g0000576 Lotus japonicus HOM05D002915 ORTHO05D003004 4.9e-13 79.0 196 30.1
PGSC0003DMG400037269 Solanum tuberosum HOM05D002915 ORTHO05D003004 4.9e-13 79.0 210 28.1
Haze_14809 Corylus avellana HOM05D002915 ORTHO05D003004 6.4e-13 78.6 86 43.0
Sed0005801 Sechium edule HOM05D002915 ORTHO05D003004 6.4e-13 78.6 198 26.8
SGA_v2.0_scaffold51G18778 Striga asiatica HOM05D002915 ORTHO05D003004 6.4e-13 78.6 155 31.0
Thecc.09G039200 Theobroma cacao HOM05D002915 ORTHO05D003004 6.4e-13 78.6 200 28.0
MELO3C034049.2 Cucumis melo HOM05D002915 ORTHO05D003004 1.1e-12 77.8 198 27.3
FAN28G1700 Fragaria x ananassa HOM05D002915 ORTHO05D003004 1.1e-12 77.8 169 32.0
FAN28G2009 Fragaria x ananassa HOM05D002915 ORTHO05D003004 1.1e-12 77.8 169 32.0
FAN28G2017 Fragaria x ananassa HOM05D002915 ORTHO05D003004 1.1e-12 77.8 169 32.0
Lj1g0028201 Lotus japonicus HOM05D002915 ORTHO05D003004 1.1e-12 77.8 186 32.8
ClCG11G013100 Citrullus lanatus HOM05D002915 ORTHO05D003004 1.9e-12 77.0 199 30.2
Medtr3g075360 Medicago truncatula HOM05D002915 ORTHO05D003004 1.9e-12 77.0 209 27.8
Glyma.07G247700 Glycine max HOM05D002915 ORTHO05D003004 2.4e-12 76.6 195 27.7
Psat0s6185g0040 Pisum sativum HOM05D002915 ORTHO05D003004 2.4e-12 76.6 189 28.6
Aqoxy7G00055 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 3.2e-12 76.3 82 43.9
Duzib150G0710 Durio zibethinus HOM05D002915 ORTHO05D003004 3.2e-12 76.3 224 26.3
Lj4g0002182 Lotus japonicus HOM05D002915 ORTHO05D003004 4.1e-12 75.9 206 30.6
TPR.G19429 Trifolium pratense HOM05D002915 ORTHO05D003004 4.1e-12 75.9 194 28.9
Aqoxy4G02259 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 5.4e-12 75.5 143 32.9
Lj3g0026757 Lotus japonicus HOM05D002915 ORTHO05D003004 5.4e-12 75.5 210 28.6
TPR.G3196 Trifolium pratense HOM05D002915 ORTHO05D003004 5.4e-12 75.5 193 27.5
CsaV3_5G029620 Cucumis sativus L. HOM05D002915 ORTHO05D003004 7.0e-12 75.1 197 25.9
CANSAT64G2697 Cannabis sativa HOM05D002915 ORTHO05D003004 9.2e-12 74.7 216 29.6
arahy.Tifrunner.gnm1.ann1.JTPM3R Arachis hypogaea HOM05D000176 ORTHO05D000106 1.2e-11 74.3 198 29.8
Thhalv10019642m.g Eutrema salsugineum HOM05D002915 ORTHO05D003004 1.2e-11 74.3 101 35.6
Glyma.17G026300 Glycine max HOM05D002915 ORTHO05D003004 2.0e-11 73.6 162 30.9
Cc08_g03020 Coffea canephora HOM05D002915 ORTHO05D003004 2.7e-11 73.2 197 26.9
PGSC0003DMG400043813 Solanum tuberosum HOM05D002915 ORTHO05D003004 2.7e-11 73.2 199 28.1
Cc11_g03110 Coffea canephora HOM05D002915 ORTHO05D003004 3.5e-11 72.8 92 34.8
Thecc.06G218700 Theobroma cacao HOM05D002915 ORTHO05D003004 4.6e-11 72.4 206 26.2
Gohir.A05G169100 Gossypium hirsutum HOM05D002915 ORTHO05D003004 1.0e-10 71.2 210 28.1
Gorai.009G177500 Gossypium raimondii HOM05D002915 ORTHO05D003004 1.3e-10 70.9 164 31.7
Gohir.D05G172300 Gossypium hirsutum HOM05D002915 ORTHO05D003004 1.7e-10 70.5 164 31.7
Sopen04g019620 Solanum pennellii HOM05D000002 ORTHO05D000001 3.9e-10 69.3 210 25.2
Ca_21504_v3 Cicer arietinum L. HOM05D002915 ORTHO05D003004 8.6e-10 68.2 180 28.3
Cpa.g.sc85.123 Carica papaya HOM05D002915 ORTHO05D003004 1.5e-09 67.4 142 30.3
FAN17G1773 Fragaria x ananassa HOM05D002915 ORTHO05D003004 3.3e-09 66.2 199 27.6
CAN.G853.27 Capsicum annuum HOM05D002915 ORTHO05D003004 9.5e-09 64.7 96 30.2
Lj1g0000366 Lotus japonicus HOM05D002915 ORTHO05D003004 1.6e-08 63.9 162 32.1
AT1G74875 Arabidopsis thaliana HOM05D002915 ORTHO05D003004 3.6e-08 62.8 201 24.9
Eucgr.G01570 Eucalyptus grandis HOM05D002915 ORTHO05D003004 3.6e-08 62.8 182 24.7
Medtr4g123430 Medicago truncatula HOM05D002915 ORTHO05D003004 4.7e-08 62.4 138 26.8
AL2G26290 Arabidopsis lyrata HOM05D002915 ORTHO05D003004 6.2e-08 62.0 201 25.4
FAN12G2317 Fragaria x ananassa HOM05D002915 ORTHO05D003004 8.1e-08 61.6 142 31.0
CARHR060200 Cardamine hirsuta HOM05D002915 ORTHO05D003004 1.1e-07 61.2 193 28.0
Thecc.03G155800 Theobroma cacao HOM05D002915 ORTHO05D003004 1.8e-07 60.5 141 31.9
BraA07t31040Z Brassica rapa HOM05D006725 ORTHO05D008223 6.8e-07 58.5 122 27.0
Lsat_1_v5_gn_2_33740 Lactuca sativa HOM05D009793 ORTHO05D011998 8.9e-07 58.2 123 26.0
Lj6g0021938 Lotus japonicus HOM05D002915 ORTHO05D003004 1.2e-06 57.8 168 31.5
Thecc.03G155900 Theobroma cacao HOM05D002915 ORTHO05D003004 1.2e-06 57.8 56 44.6
Carub.0002s1396 Capsella rubella HOM05D002915 ORTHO05D003004 2.0e-06 57.0 206 24.8
Phvul.003G180500 Phaseolus vulgaris HOM05D002915 ORTHO05D003004 2.0e-06 57.0 95 31.6
BcaC08g46172 Brassica carinata HOM05D002915 ORTHO05D003004 4.4e-06 55.8 122 27.0
PGSC0003DMG400038597 Solanum tuberosum HOM05D002915 ORTHO05D003004 4.4e-06 55.8 154 27.3
BcaB03g15181 Brassica carinata HOM05D002915 ORTHO05D003004 9.9e-06 54.7 118 24.6


User provided reference genes

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