Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G0919 Papaver somniferum HOM05D006869 ORTHO05D008641 1.2e-69 266.5 151 100.0
PSO675G8621 Papaver somniferum HOM05D006869 ORTHO05D008641 1.1e-65 253.4 152 96.7
PSO732G0001 Papaver somniferum HOM05D006869 ORTHO05D008641 3.4e-64 248.4 152 94.1
COL.COLO4_17099 Corchorus olitorius HOM05D006869 ORTHO05D008641 1.9e-35 152.9 124 67.7
Aqoxy3G02480 Aquilegia oxysepala HOM05D006869 ORTHO05D008641 2.5e-35 152.5 131 70.2
TAR375G0341 Trochodendron aralioides HOM05D006869 ORTHO05D008641 6.3e-34 147.9 109 77.1
Atru.chr6.1763 Acer truncatum HOM05D006869 ORTHO05D008641 1.1e-33 147.1 130 63.8
Nn1g00590 Nelumbo nucifera HOM05D006869 ORTHO05D008641 5.3e-33 144.8 108 73.1
CSS0028384 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 1.5e-32 143.3 109 74.3
CSS0030709 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 1.5e-32 143.3 109 74.3
Ciclev10033051m.g Citrus clementina HOM05D006869 ORTHO05D008641 1.5e-32 143.3 133 62.4
Cpa.g.sc6.427 Carica papaya HOM05D006869 ORTHO05D008641 3.4e-32 142.1 114 72.8
Thecc.03G232900 Theobroma cacao HOM05D006869 ORTHO05D008641 1.0e-31 140.6 127 63.8
Actinidia09229 Actinidia chinensis HOM05D002067 ORTHO05D002244 1.3e-31 140.2 129 64.3
Potri.001G145500 Populus trichocarpa HOM05D006869 ORTHO05D008641 1.3e-31 140.2 132 63.6
Duzib205G1446 Durio zibethinus HOM05D006869 ORTHO05D008641 1.7e-31 139.8 121 65.3
TWI15G0987 Tripterygium wilfordii HOM05D006869 ORTHO05D008641 1.7e-31 139.8 123 68.3
Hma1.2p1_0414F.1_g147870 Hydrangea macrophylla HOM05D006869 ORTHO05D008641 2.2e-31 139.4 100 78.0
MD06G1029000 Malus domestica HOM05D006869 ORTHO05D008641 2.2e-31 139.4 109 72.5
Sc22g0001440 Simmondsia chinensis HOM05D006869 ORTHO05D008641 2.9e-31 139.0 113 69.9
Eucgr.E00305 Eucalyptus grandis HOM05D006869 ORTHO05D008641 6.5e-31 137.9 111 71.2
Phvul.005G061500 Phaseolus vulgaris HOM05D006869 ORTHO05D008641 8.5e-31 137.5 117 66.7
Ca_03396_v3 Cicer arietinum L. HOM05D006869 ORTHO05D008641 1.1e-30 137.1 107 71.0
Manes.15G174500 Manihot esculenta HOM05D006869 ORTHO05D008641 1.1e-30 137.1 132 64.4
Prupe.5G042800 Prunus persica HOM05D006869 ORTHO05D008641 1.1e-30 137.1 125 64.0
Lj3g0015338 Lotus japonicus HOM05D006869 ORTHO05D008641 1.9e-30 136.3 106 71.7
CiPaw.12G061200 Carya illinoinensis HOM05D006869 ORTHO05D008641 2.5e-30 136.0 113 68.1
FvH4_5g21430 Fragaria vesca HOM05D006869 ORTHO05D008641 2.5e-30 136.0 121 66.9
Gohir.A09G198300 Gossypium hirsutum HOM05D006869 ORTHO05D008641 2.5e-30 136.0 124 62.1
CANSAT21G0218 Cannabis sativa HOM05D006869 ORTHO05D008641 4.2e-30 135.2 113 67.3
CsaV3_1G016990 Cucumis sativus L. HOM05D006869 ORTHO05D008641 5.5e-30 134.8 124 59.7
CsaV3_3G049460 Cucumis sativus L. HOM05D006869 ORTHO05D008641 5.5e-30 134.8 124 59.7
GSVIVG01013242001 Vitis vinifera HOM05D006869 ORTHO05D008641 7.2e-30 134.4 111 67.6
Glyma.13G259900 Glycine max HOM05D006869 ORTHO05D008641 9.4e-30 134.0 105 71.4
RcHm_v2.0_Chr7g0208861 Rosa chinensis HOM05D006869 ORTHO05D008641 9.4e-30 134.0 111 67.6
VMungo1080G1596 Vigna mungo HOM05D006869 ORTHO05D008641 9.4e-30 134.0 111 67.6
PGR042G2539 Punica granatum HOM05D006869 ORTHO05D008641 1.6e-29 133.3 115 65.2
PGSC0003DMG400026597 Solanum tuberosum HOM05D006869 ORTHO05D008641 2.1e-29 132.9 125 59.2
Glyma.15G248100 Glycine max HOM05D006869 ORTHO05D008641 2.7e-29 132.5 95 77.9
Hund14421 Selenicereus undatus HOM05D006869 ORTHO05D008641 3.6e-29 132.1 113 66.4
CiPaw.11G089700 Carya illinoinensis HOM05D006869 ORTHO05D008641 6.1e-29 131.3 121 62.8
Migut.D00490 Erythranthe guttata HOM05D006869 ORTHO05D008641 7.9e-29 131.0 98 72.4
FAN04G2266 Fragaria x ananassa HOM05D006869 ORTHO05D008641 7.9e-29 131.0 127 64.6
FAN13G1368 Fragaria x ananassa HOM05D006869 ORTHO05D008641 7.9e-29 131.0 118 66.1
Medtr2g071640 Medicago truncatula HOM05D006869 ORTHO05D008641 7.9e-29 131.0 109 66.1
FAN08G2623 Fragaria x ananassa HOM05D006869 ORTHO05D008641 1.0e-28 130.6 118 66.1
Gohir.D09G192900 Gossypium hirsutum HOM05D006869 ORTHO05D008641 1.0e-28 130.6 124 60.5
MELO3C003378.2 Cucumis melo HOM05D006869 ORTHO05D008641 1.8e-28 129.8 124 58.1
Sopen06g021250 Solanum pennellii HOM05D006869 ORTHO05D008641 1.8e-28 129.8 125 58.4
Actinidia14827 Actinidia chinensis HOM05D006869 ORTHO05D008641 2.3e-28 129.4 122 62.3
FAN18G0870 Fragaria x ananassa HOM05D006869 ORTHO05D008641 2.3e-28 129.4 127 63.8
DCAR_005606 Daucus carota HOM05D006869 ORTHO05D008641 5.1e-28 128.3 133 58.6
TPR.G26622 Trifolium pratense HOM05D006869 ORTHO05D008641 5.1e-28 128.3 124 62.1
DCAR_024975 Daucus carota HOM05D006869 ORTHO05D008641 3.3e-27 125.6 116 61.2
MSTRG.17527 Avicennia marina HOM05D006869 ORTHO05D008641 1.7e-26 123.2 108 63.9
ClCG09G012310 Citrullus lanatus HOM05D006869 ORTHO05D008641 1.7e-26 123.2 133 53.4
HPP92_026375 Vanilla planifolia HOM05D006869 ORTHO05D008641 4.8e-26 121.7 107 60.7
arahy.Tifrunner.gnm1.ann1.U4TMK5 Arachis hypogaea HOM05D006869 ORTHO05D008641 6.3e-26 121.3 122 59.8
HanXRQChr08g0227941 Helianthus annuus HOM05D006869 ORTHO05D008641 1.4e-25 120.2 104 64.4
ECA233G4479 Erigeron canadensis HOM05D006869 ORTHO05D008641 2.4e-25 119.4 120 61.7
Lalb_Chr25g0285441 Lupinus albus HOM05D006869 ORTHO05D008641 2.4e-25 119.4 89 73.0
arahy.Tifrunner.gnm1.ann1.TLF144 Arachis hypogaea HOM05D006869 ORTHO05D008641 3.1e-25 119.0 122 59.0
Sabra01G0114100 Salix brachista HOM05D006869 ORTHO05D008641 4.1e-25 118.6 153 49.7
THA.LOC104798477 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 1.2e-24 117.1 95 68.4
arahy.Tifrunner.gnm1.ann1.4F5UFQ Arachis hypogaea HOM05D006869 ORTHO05D008641 2.0e-24 116.3 122 58.2
Gorai.006G215800 Gossypium raimondii HOM05D006869 ORTHO05D008641 3.4e-24 115.5 161 47.8
Nitab4.5_0003100g0080 Nicotiana tabacum HOM05D006869 ORTHO05D008641 5.9e-24 114.8 159 50.3
Sp1g28510 Schrenkiella parvula HOM05D006869 ORTHO05D008641 5.9e-24 114.8 95 69.5
THA.LOC104798593 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 5.9e-24 114.8 95 66.3
AL1G46570 Arabidopsis lyrata HOM05D006869 ORTHO05D008641 7.7e-24 114.4 95 69.5
unitig_746.g26748 Utricularia gibba HOM05D006869 ORTHO05D008641 1.0e-23 114.0 112 58.9
CARHR031750 Cardamine hirsuta HOM05D006869 ORTHO05D008641 1.3e-23 113.6 99 69.7
Zm00001eb024260 Zea mays HOM05D006869 ORTHO05D008641 1.7e-23 113.2 117 58.1
AT1G32370 Arabidopsis thaliana HOM05D006869 ORTHO05D008641 2.2e-23 112.8 95 68.4
Carub.0001s3075 Capsella rubella HOM05D006869 ORTHO05D008641 3.8e-23 112.1 95 67.4
Thhalv10009100m.g Eutrema salsugineum HOM05D006869 ORTHO05D008641 5.0e-23 111.7 116 58.6
Os02g0279600 Oryza sativa ssp. japonica HOM05D006869 ORTHO05D008641 5.0e-23 111.7 96 63.5
Aa31LG2G13630 Aethionema arabicum HOM05D006869 ORTHO05D008641 1.1e-22 110.5 95 66.3
BcaB07g32921 Brassica carinata HOM05D006869 ORTHO05D008641 1.1e-22 110.5 95 66.3
A09p33790 Brassica napus HOM05D006869 ORTHO05D008641 3.2e-22 109.0 105 63.8
BraA09t38929Z Brassica rapa HOM05D006869 ORTHO05D008641 3.2e-22 109.0 105 63.8
BcaC05g27275 Brassica carinata HOM05D006869 ORTHO05D008641 4.2e-22 108.6 105 63.8
C05p31830 Brassica napus HOM05D006869 ORTHO05D008641 4.2e-22 108.6 105 63.8
BolC5t31911H Brassica oleracea HOM05D006869 ORTHO05D008641 4.2e-22 108.6 105 63.8
Oeu015441.1 Olea europaea HOM05D006869 ORTHO05D008641 2.1e-21 106.3 92 64.1
Dinv25192 Davidia involucrata HOM05D006869 ORTHO05D008641 1.8e-20 103.2 123 52.0
SGA_v2.0_scaffold94G28479 Striga asiatica HOM05D006869 ORTHO05D008641 3.9e-20 102.1 102 58.8
THA.LOC104822843 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 3.9e-20 102.1 84 66.7
MBI04_g13865_MAGBIO Magnolia biondii HOM05D006869 ORTHO05D008641 2.0e-19 99.8 86 62.8
Rhsim07G0123600 Rhododendron simsii HOM05D006869 ORTHO05D008641 2.6e-19 99.4 80 66.2
Sed0006536 Sechium edule HOM05D006869 ORTHO05D008641 2.6e-19 99.4 101 56.4
ATR0049G078 Amborella trichopoda HOM05D006869 ORTHO05D008641 5.7e-19 98.2 77 67.5
vmacro14155 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 9.7e-19 97.4 75 66.7
SEGI_28722 Sequoiadendron giganteum HOM05D006869 ORTHO05D008641 6.3e-18 94.7 99 58.6
EL10Ac5g12174 Beta vulgaris HOM05D006869 ORTHO05D008641 5.3e-17 91.7 65 70.8
Cc08_g02310 Coffea canephora HOM05D006869 ORTHO05D008641 7.0e-17 91.3 75 65.3
Lsat_1_v5_gn_6_67180 Lactuca sativa HOM05D006869 ORTHO05D008641 1.6e-16 90.1 67 68.7
Nitab4.5_0004658g0060 Nicotiana tabacum HOM05D006869 ORTHO05D008641 1.6e-16 90.1 79 63.3
Ah.07g200090 Amaranthus hybridus HOM05D006869 ORTHO05D008641 1.3e-15 87.0 71 62.0
Peaxi162Scf00497g00098 Petunia axillaris HOM05D006869 ORTHO05D008641 1.3e-15 87.0 75 62.7
SalBow6G5905 Salvia bowleyana HOM05D006869 ORTHO05D008641 2.1e-13 79.7 71 57.7
Psat1g009440 Pisum sativum HOM05D006869 ORTHO05D008641 1.4e-12 77.0 57 73.7
Haze_08288 Corylus avellana HOM05D006869 ORTHO05D008641 7.5e-11 71.2 71 59.2
BcaC05g27873 Brassica carinata HOM05D006869 ORTHO05D008641 1.3e-10 70.5 101 52.5
C05p38760 Brassica napus HOM05D006869 ORTHO05D008641 1.3e-10 70.5 101 52.5
AagrBONN_evm.TU.Sc2ySwM_228.2858 Anthoceros agrestis HOM05D006869 ORTHO05D008641 4.8e-10 68.6 120 41.7
vmacro23515 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 6.3e-10 68.2 44 72.7
Zm00001eb390630 Zea mays HOM05D006869 ORTHO05D008641 2.4e-09 66.2 52 69.2
Dinv28924 Davidia involucrata HOM05D002067 ORTHO05D002244 5.3e-09 65.1 62 58.1
BolC5t32616H Brassica oleracea HOM05D006869 ORTHO05D008641 9.1e-09 64.3 68 58.8
Mapoly0009s0146 Marchantia polymorpha HOM05D006869 ORTHO05D008641 1.6e-08 63.5 119 39.5
PGR142G3578 Punica granatum HOM05D006869 ORTHO05D008641 2.7e-08 62.8 54 57.4


User provided reference genes

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