Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G0774 Papaver somniferum HOM05D005607 ORTHO05D008142 3.6e-286 987.6 523 100.0
PSO210G5410 Papaver somniferum HOM05D005607 ORTHO05D008142 3.9e-277 957.6 523 96.9
GSVIVG01014288001 Vitis vinifera HOM05D005607 ORTHO05D008142 3.0e-184 649.0 526 64.8
CSS0008326 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 4.1e-181 638.6 525 63.8
Prupe.4G175900 Prunus persica HOM05D005607 ORTHO05D008142 5.3e-181 638.3 525 64.4
Eucgr.F01169 Eucalyptus grandis HOM05D005607 ORTHO05D008142 3.4e-180 635.6 525 64.8
Nn1g04204 Nelumbo nucifera HOM05D005607 ORTHO05D008142 3.4e-180 635.6 526 65.0
MD03G1232700 Malus domestica HOM05D005607 ORTHO05D008142 4.6e-177 625.2 525 62.7
Thecc.07G096400 Theobroma cacao HOM05D005607 ORTHO05D008142 4.6e-177 625.2 524 63.2
TWI38G0301 Tripterygium wilfordii HOM05D005607 ORTHO05D008142 1.3e-176 623.6 525 62.3
COL.COLO4_36717 Corchorus olitorius HOM05D005607 ORTHO05D008142 3.3e-175 619.0 524 62.2
Potri.001G396500 Populus trichocarpa HOM05D005607 ORTHO05D008142 9.7e-175 617.5 528 63.1
Manes.03G105800 Manihot esculenta HOM05D005607 ORTHO05D008142 1.8e-173 613.2 525 61.9
Sabra16G0259600 Salix brachista HOM05D005607 ORTHO05D008142 3.1e-173 612.5 528 62.3
Gohir.D05G347700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 2.6e-172 609.4 524 62.4
Gohir.A04G035700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 1.3e-171 607.1 524 62.2
Gorai.009G375500 Gossypium raimondii HOM05D005607 ORTHO05D008142 3.8e-171 605.5 524 62.2
Cfa020607 Carpinus fangiana HOM05D005607 ORTHO05D008142 2.5e-170 602.8 525 61.5
RcHm_v2.0_Chr5g0032701 Rosa chinensis HOM05D005607 ORTHO05D008142 4.2e-170 602.1 526 62.4
Ciclev10007885m.g Citrus clementina HOM05D005607 ORTHO05D008142 4.7e-169 598.6 524 61.3
CiPaw.11G167700 Carya illinoinensis HOM05D005607 ORTHO05D008142 1.0e-168 597.4 525 60.0
Dinv20204 Davidia involucrata HOM05D005607 ORTHO05D008142 1.0e-168 597.4 525 62.3
MSTRG.12893 Avicennia marina HOM05D005607 ORTHO05D008142 1.5e-167 593.6 526 59.9
FvH4_3g19420 Fragaria vesca HOM05D005607 ORTHO05D008142 1.5e-167 593.6 524 61.3
PGR083G1887 Punica granatum HOM05D005607 ORTHO05D008142 1.5e-167 593.6 525 61.7
Cpa.g.sc131.86 Carica papaya HOM05D005607 ORTHO05D008142 2.6e-167 592.8 524 59.9
Rhsim06G0202700 Rhododendron simsii HOM05D005607 ORTHO05D008142 2.6e-167 592.8 540 59.6
arahy.Tifrunner.gnm1.ann1.K8QLTQ Arachis hypogaea HOM05D005607 ORTHO05D008142 3.3e-167 592.4 526 60.3
Lj3g0025006 Lotus japonicus HOM05D005607 ORTHO05D008142 3.3e-167 592.4 524 60.5
Sed0013999 Sechium edule HOM05D005607 ORTHO05D008142 4.4e-167 592.0 526 59.5
vmacro11890 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 6.3e-166 588.2 548 57.7
vmacro23190 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 2.4e-165 586.3 548 57.5
CSS0003695 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 5.3e-165 585.1 535 59.4
ClCG11G017810 Citrullus lanatus HOM05D005607 ORTHO05D008142 1.2e-164 583.9 540 58.1
MELO3C025610.2 Cucumis melo HOM05D005607 ORTHO05D008142 2.0e-164 583.2 526 58.6
CsaV3_4G033450 Cucumis sativus L. HOM05D005607 ORTHO05D008142 2.6e-164 582.8 526 58.7
Glyma.06G236100 Glycine max HOM05D005607 ORTHO05D008142 2.6e-164 582.8 527 60.2
Actinidia31524 Actinidia chinensis HOM05D005607 ORTHO05D008142 5.9e-164 581.6 525 60.8
arahy.Tifrunner.gnm1.ann1.3D346W Arachis hypogaea HOM05D005607 ORTHO05D008142 7.7e-164 581.3 527 59.2
Ca_23036_v3 Cicer arietinum L. HOM05D005607 ORTHO05D008142 2.9e-163 579.3 524 59.5
Duzib213G0871 Durio zibethinus HOM05D005607 ORTHO05D008142 2.9e-163 579.3 495 62.6
CANSAT35G0745 Cannabis sativa HOM05D005607 ORTHO05D008142 6.5e-163 578.2 525 58.5
Lalb_Chr19g0134061 Lupinus albus HOM05D005607 ORTHO05D008142 3.2e-162 575.9 525 59.6
THA.LOC104815562 Tarenaya hassleriana HOM05D005607 ORTHO05D008142 7.2e-162 574.7 525 59.6
Aqoxy4G00691 Aquilegia oxysepala HOM05D005607 ORTHO05D008142 1.2e-161 573.9 470 65.7
Cc05_g11730 Coffea canephora HOM05D005607 ORTHO05D008142 1.6e-161 573.5 526 58.2
TPR.G28174 Trifolium pratense HOM05D005607 ORTHO05D008142 2.1e-161 573.2 525 59.4
MD11G1253400 Malus domestica HOM05D005607 ORTHO05D008142 3.6e-161 572.4 464 64.4
Nitab4.5_0008275g0010 Nicotiana tabacum HOM05D005607 ORTHO05D008142 6.1e-161 571.6 526 57.6
FAN16G0865 Fragaria x ananassa HOM05D005607 ORTHO05D008142 8.0e-161 571.2 538 58.7
CAN.G162.36 Capsicum annuum HOM05D005607 ORTHO05D008142 1.8e-160 570.1 526 57.6
Eucgr.F01141 Eucalyptus grandis HOM05D005607 ORTHO05D008142 1.5e-159 567.0 523 60.2
Nitab4.5_0002330g0110 Nicotiana tabacum HOM05D005607 ORTHO05D008142 2.0e-159 566.6 526 57.2
Atru.chr2.2407 Acer truncatum HOM05D005607 ORTHO05D008142 2.6e-159 566.2 524 58.8
ATR0737G117 Amborella trichopoda HOM05D005607 ORTHO05D008142 9.7e-159 564.3 518 57.5
Sc16g0007180 Simmondsia chinensis HOM05D005607 ORTHO05D008142 2.2e-158 563.1 527 58.6
Eucgr.F00890 Eucalyptus grandis HOM05D005607 ORTHO05D008142 3.7e-158 562.4 522 59.2
Medtr8g058790 Medicago truncatula HOM05D005607 ORTHO05D008142 3.1e-157 559.3 519 58.8
Medtr8g061280 Medicago truncatula HOM05D005607 ORTHO05D008142 3.1e-157 559.3 519 58.8
Lsat_1_v5_gn_7_104480 Lactuca sativa HOM05D005607 ORTHO05D008142 8.5e-155 551.2 527 57.1
Sopen07g031060 Solanum pennellii HOM05D005607 ORTHO05D008142 1.1e-154 550.8 525 55.6
HanXRQChr15g0495421 Helianthus annuus HOM05D005607 ORTHO05D008142 7.2e-154 548.1 526 56.5
CDE10G0361 Ceratophyllum demersum HOM05D005607 ORTHO05D008142 1.6e-153 547.0 513 55.4
VMungo1127G0827 Vigna mungo HOM05D005607 ORTHO05D008142 3.6e-153 545.8 523 57.7
ECA236G2999 Erigeron canadensis HOM05D005607 ORTHO05D008142 1.0e-152 544.3 526 55.9
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 6.3e-150 535.0 567 54.0
DCAR_017123 Daucus carota HOM05D005607 ORTHO05D008142 2.4e-149 533.1 556 53.8
Oeu005401.4 Olea europaea HOM05D005607 ORTHO05D008142 1.2e-148 530.8 644 49.5
AT3G15180 Arabidopsis thaliana HOM05D005607 ORTHO05D008142 2.2e-147 526.6 520 54.2
Carub.0003s1483 Capsella rubella HOM05D005607 ORTHO05D008142 2.2e-147 526.6 520 54.0
AL3G27570 Arabidopsis lyrata HOM05D005607 ORTHO05D008142 4.2e-146 522.3 520 54.4
Sp3g13390 Schrenkiella parvula HOM05D005607 ORTHO05D008142 4.7e-145 518.8 524 53.4
Thhalv10020515m.g Eutrema salsugineum HOM05D005607 ORTHO05D008142 1.4e-144 517.3 520 54.0
SGA_v2.0_scaffold130G34350 Striga asiatica HOM05D005607 ORTHO05D008142 8.8e-144 514.6 577 51.8
BraA05t22250Z Brassica rapa HOM05D005607 ORTHO05D008142 2.8e-142 509.6 520 52.9
Ah.06g184600 Amaranthus hybridus HOM05D005607 ORTHO05D008142 6.5e-139 498.4 526 52.7
EL10Ac4g08241 Beta vulgaris HOM05D005607 ORTHO05D008142 2.5e-138 496.5 519 53.0
A05p34290 Brassica napus HOM05D005607 ORTHO05D008142 7.2e-138 495.0 547 50.3
Aa31LG8G2380 Aethionema arabicum HOM05D005607 ORTHO05D008142 2.8e-137 493.0 531 52.4
Duzib170G0139 Durio zibethinus HOM05D005607 ORTHO05D008142 8.0e-137 491.5 524 54.0
Os05g0557200 Oryza sativa ssp. japonica HOM05D005607 ORTHO05D008142 1.0e-136 491.1 530 50.6
C05p52050 Brassica napus HOM05D005607 ORTHO05D008142 1.4e-136 490.7 546 50.2
BolC5t33890H Brassica oleracea HOM05D005607 ORTHO05D008142 3.0e-136 489.6 534 50.6
BcaB06g29542 Brassica carinata HOM05D005607 ORTHO05D008142 4.9e-134 482.3 520 51.5
Zm00001eb295460 Zea mays HOM05D005607 ORTHO05D008142 2.0e-132 476.9 515 50.3
Migut.H01958 Erythranthe guttata HOM05D005607 ORTHO05D008142 1.0e-128 464.5 447 56.2
Phvul.011G160300 Phaseolus vulgaris HOM05D005607 ORTHO05D008142 1.2e-127 461.1 450 57.8
Psat7g207160 Pisum sativum HOM05D005607 ORTHO05D008142 1.9e-125 453.8 427 58.8
Lj1A839T37 Lonicera japonica HOM05D005607 ORTHO05D008142 1.8e-120 437.2 389 60.4
Hund02235 Selenicereus undatus HOM05D005607 ORTHO05D008142 3.9e-107 392.9 402 55.2
Lj1A839T35 Lonicera japonica HOM05D005607 ORTHO05D008142 2.8e-105 386.7 405 54.6
AUR62019473 Chenopodium quinoa HOM05D005607 ORTHO05D008142 7.8e-100 368.6 555 42.7
AUR62036159 Chenopodium quinoa HOM05D005607 ORTHO05D008142 5.1e-99 365.9 529 43.7
Peaxi162Scf00069g01839 Petunia axillaris HOM05D005607 ORTHO05D008142 3.8e-94 349.7 329 56.8
AagrBONN_evm.TU.Sc2ySwM_344.1287 Anthoceros agrestis HOM05D005607 ORTHO05D008142 2.4e-93 347.1 515 38.3
Solyc07g062860.3 Solanum lycopersicum HOM05D005607 ORTHO05D008142 4.6e-92 342.8 336 55.7
MBI06_g04182_MAGBIO Magnolia biondii HOM05D005607 ORTHO05D008142 5.4e-85 319.3 378 53.4
Pp3c1_12630 Physcomitrium patens HOM05D005607 ORTHO05D008142 7.4e-82 308.9 540 36.3
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 2.8e-81 307.0 373 48.5
SalBow7G3213 Salvia bowleyana HOM05D005607 ORTHO05D008142 4.8e-81 306.2 290 55.5
SalBow7G3521 Salvia bowleyana HOM05D005607 ORTHO05D008142 4.8e-81 306.2 290 55.5
SMO139G0024 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 2.3e-75 287.3 522 35.1
QL08p023962 Quercus lobata HOM05D005607 ORTHO05D008142 1.9e-66 257.7 236 60.6
FAN11G3919 Fragaria x ananassa HOM05D005607 ORTHO05D008142 1.2e-63 248.4 268 53.0
QL08p023973 Quercus lobata HOM05D005607 ORTHO05D008142 2.5e-61 240.7 193 63.7
MD11G1279000 Malus domestica HOM05D005607 ORTHO05D008142 2.3e-59 234.2 288 51.4
Glyma.12G162201 Glycine max HOM05D005607 ORTHO05D008142 2.6e-50 204.1 172 62.2
CARHR090160 Cardamine hirsuta HOM05D005607 ORTHO05D008142 8.2e-49 199.1 229 48.5
PGSC0003DMG400012404 Solanum tuberosum HOM05D005607 ORTHO05D008142 8.2e-49 199.1 183 55.2
SMO145G0057 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 1.1e-48 198.7 505 29.7
Peaxi162Scf00069g01838 Petunia axillaris HOM05D005607 ORTHO05D008142 7.2e-45 186.0 163 57.7
CBR_g2884 Chara braunii HOM05D005607 ORTHO05D008142 3.3e-42 177.2 290 40.0
QL08p023949 Quercus lobata HOM05D005607 ORTHO05D008142 2.0e-34 151.4 104 69.2
FAN25G1444 Fragaria x ananassa HOM05D005607 ORTHO05D008142 4.1e-32 143.7 108 65.7
SEGI_34734 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 8.0e-28 129.4 123 51.2
SEGI_17376 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 8.6e-22 109.4 135 42.2
MELO3C033904.2 Cucumis melo HOM05D005607 ORTHO05D008142 8.9e-19 99.4 90 55.6
EL10Ac6g14983 Beta vulgaris HOM05D005607 ORTHO05D008142 3.2e-16 90.9 101 46.5
CBR_g2888 Chara braunii HOM05D000019 ORTHO05D000002 6.1e-12 76.6 77 49.4
SEGI_12563 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 2.7e-07 61.2 75 48.0
MELO3C033981.2 Cucumis melo HOM05D005607 ORTHO05D166899 3.5e-07 60.8 66 53.0
HanXRQChr10g0304121 Helianthus annuus HOM05D005607 ORTHO05D008142 1.7e-06 58.5 66 56.1


User provided reference genes

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