Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G0589 Papaver somniferum HOM05D006721 ORTHO05D000476 2.8e-58 228.4 115 100.0
PSO210G7245 Papaver somniferum HOM05D006721 ORTHO05D000476 1.8e-57 225.7 115 99.1
GSVIVG01036217001 Vitis vinifera HOM05D006721 ORTHO05D000476 3.0e-36 155.2 110 73.6
PGR142G1199 Punica granatum HOM05D006721 ORTHO05D000476 2.5e-35 152.1 109 74.3
TAR365G0041 Trochodendron aralioides HOM05D006721 ORTHO05D000476 5.6e-35 151.0 109 76.1
Actinidia38949 Actinidia chinensis HOM05D006721 ORTHO05D000476 1.6e-34 149.4 109 73.4
Aqoxy2G03596 Aquilegia oxysepala HOM05D006721 ORTHO05D000476 2.8e-34 148.7 109 76.1
Cpa.g.sc162.11 Carica papaya HOM05D006721 ORTHO05D000476 3.7e-34 148.3 112 71.4
Nn1g02669 Nelumbo nucifera HOM05D006721 ORTHO05D000476 3.7e-34 148.3 109 72.5
Dinv14631 Davidia involucrata HOM05D006721 ORTHO05D000476 6.2e-34 147.5 110 69.1
Manes.09G149900 Manihot esculenta HOM05D006721 ORTHO05D000476 8.1e-34 147.1 110 70.9
Ciclev10022930m.g Citrus clementina HOM05D006721 ORTHO05D000476 1.1e-33 146.7 108 72.2
EL10Ac4g09049 Beta vulgaris HOM05D006721 ORTHO05D000476 2.4e-33 145.6 99 75.8
Cc02_g09090 Coffea canephora HOM05D006721 ORTHO05D000476 3.1e-33 145.2 108 70.4
Migut.F00814 Erythranthe guttata HOM05D006721 ORTHO05D000476 3.1e-33 145.2 107 72.0
Glyma.03G251900 Glycine max HOM05D006721 ORTHO05D000476 3.1e-33 145.2 111 70.3
Phvul.006G106600 Phaseolus vulgaris HOM05D006721 ORTHO05D000476 5.3e-33 144.4 111 70.3
QL01p041965 Quercus lobata HOM05D006721 ORTHO05D000476 5.3e-33 144.4 111 69.4
THA.LOC104808031 Tarenaya hassleriana HOM05D006721 ORTHO05D000476 5.3e-33 144.4 110 68.2
HanXRQChr11g0322821 Helianthus annuus HOM05D006721 ORTHO05D000476 6.9e-33 144.1 109 70.6
Atru.chr2.886 Acer truncatum HOM05D006721 ORTHO05D000476 9.0e-33 143.7 108 70.4
Haze_04466 Corylus avellana HOM05D006721 ORTHO05D000476 1.2e-32 143.3 111 70.3
Lsat_1_v5_gn_2_107641 Lactuca sativa HOM05D006721 ORTHO05D000476 1.2e-32 143.3 108 70.4
Sabra19G0016300 Salix brachista HOM05D006721 ORTHO05D000476 1.2e-32 143.3 108 70.4
Sabra19G0026800 Salix brachista HOM05D006721 ORTHO05D000476 1.2e-32 143.3 108 70.4
Actinidia34741 Actinidia chinensis HOM05D006721 ORTHO05D000476 1.5e-32 142.9 109 70.6
MBI19_g37090_MAGBIO Magnolia biondii HOM05D006721 ORTHO05D000476 1.5e-32 142.9 111 68.5
TWI56G0396 Tripterygium wilfordii HOM05D006721 ORTHO05D000476 1.5e-32 142.9 111 68.5
Hund06940 Selenicereus undatus HOM05D006721 ORTHO05D000476 2.6e-32 142.1 103 69.9
CiPaw.07G077700 Carya illinoinensis HOM05D006721 ORTHO05D000476 3.4e-32 141.7 109 68.8
CsaV3_2G003760 Cucumis sativus L. HOM05D006721 ORTHO05D000476 3.4e-32 141.7 101 70.3
Gohir.A13G168900 Gossypium hirsutum HOM05D006721 ORTHO05D000476 3.4e-32 141.7 110 71.8
Gohir.D13G174300 Gossypium hirsutum HOM05D006721 ORTHO05D000476 3.4e-32 141.7 110 71.8
Gorai.013G186500 Gossypium raimondii HOM05D006721 ORTHO05D000476 3.4e-32 141.7 110 71.8
QL03p032184 Quercus lobata HOM05D006721 ORTHO05D000476 3.4e-32 141.7 111 68.5
QL03p032281 Quercus lobata HOM05D006721 ORTHO05D000476 3.4e-32 141.7 111 68.5
vmacro10349 Vaccinium macrocarpon HOM05D006721 ORTHO05D000476 3.4e-32 141.7 111 66.7
Eucgr.B02129 Eucalyptus grandis HOM05D006721 ORTHO05D000476 4.5e-32 141.4 109 68.8
Potri.019G014100 Populus trichocarpa HOM05D006721 ORTHO05D000476 4.5e-32 141.4 108 70.4
Ah.04g163750 Amaranthus hybridus HOM05D006721 ORTHO05D000476 5.8e-32 141.0 107 70.1
COL.COLO4_15417 Corchorus olitorius HOM05D006721 ORTHO05D000476 7.6e-32 140.6 110 70.0
Peaxi162Scf00135g00914 Petunia axillaris HOM05D006721 ORTHO05D000476 1.0e-31 140.2 102 71.6
CSS0047325 Camellia sinensis var. sinensis HOM05D006721 ORTHO05D000476 1.7e-31 139.4 109 68.8
Lj1g0023872 Lotus japonicus HOM05D006721 ORTHO05D000476 1.7e-31 139.4 110 69.1
SGA_v2.0_scaffold90G27702 Striga asiatica HOM05D006721 ORTHO05D000476 1.7e-31 139.4 96 72.9
Dinv18276 Davidia involucrata HOM05D006721 ORTHO05D000476 2.2e-31 139.0 99 71.7
ECA238G3797 Erigeron canadensis HOM05D006721 ORTHO05D000476 2.2e-31 139.0 121 62.8
Os07g0185800 Oryza sativa ssp. japonica HOM05D006721 ORTHO05D000476 2.9e-31 138.7 94 75.5
AUR62001066 Chenopodium quinoa HOM05D006721 ORTHO05D000476 3.8e-31 138.3 99 69.7
MSTRG.9005 Avicennia marina HOM05D006721 ORTHO05D000476 4.9e-31 137.9 110 67.3
Gohir.D12G180151 Gossypium hirsutum HOM05D006721 ORTHO05D000476 4.9e-31 137.9 110 71.8
Sopen04g004980 Solanum pennellii HOM05D006721 ORTHO05D000476 4.9e-31 137.9 95 75.8
CANSAT54G3036 Cannabis sativa HOM05D006721 ORTHO05D000476 8.4e-31 137.1 110 63.6
Nitab4.5_0000930g0080 Nicotiana tabacum HOM05D006721 ORTHO05D000476 8.4e-31 137.1 94 75.5
Gorai.008G193300 Gossypium raimondii HOM05D006721 ORTHO05D000476 1.1e-30 136.7 110 70.0
Prupe.6G347400 Prunus persica HOM05D006721 ORTHO05D000476 1.1e-30 136.7 114 66.7
RcHm_v2.0_Chr3g0450141 Rosa chinensis HOM05D006721 ORTHO05D000476 1.1e-30 136.7 93 76.3
HPP92_000759 Vanilla planifolia HOM05D006721 ORTHO05D000476 1.1e-30 136.7 93 76.3
Oeu058331.1 Olea europaea HOM05D006721 ORTHO05D000476 1.4e-30 136.3 107 67.3
FvH4_6g02371 Fragaria vesca HOM05D006721 ORTHO05D000476 1.9e-30 136.0 117 65.0
Lalb_Chr04g0262001 Lupinus albus HOM05D006721 ORTHO05D000476 1.9e-30 136.0 111 65.8
Sed0018278 Sechium edule HOM05D006721 ORTHO05D000476 2.5e-30 135.6 110 63.6
PGSC0003DMG400025428 Solanum tuberosum HOM05D006721 ORTHO05D000476 2.5e-30 135.6 95 73.7
Thecc.05G276800 Theobroma cacao HOM05D006721 ORTHO05D000476 2.5e-30 135.6 108 70.4
Aa31LG8G12480 Aethionema arabicum HOM05D006721 ORTHO05D000476 3.2e-30 135.2 110 64.5
CARHR104660 Cardamine hirsuta HOM05D006721 ORTHO05D000476 3.2e-30 135.2 110 65.5
Psat3g006080 Pisum sativum HOM05D006721 ORTHO05D000476 3.2e-30 135.2 113 66.4
CDE06G1546 Ceratophyllum demersum HOM05D006721 ORTHO05D000476 4.2e-30 134.8 110 67.3
FAN02G4370 Fragaria x ananassa HOM05D006721 ORTHO05D000476 4.2e-30 134.8 93 76.3
FAN05G3615 Fragaria x ananassa HOM05D004756 ORTHO05D005793 4.2e-30 134.8 93 76.3
FAN05G5208 Fragaria x ananassa HOM05D006721 ORTHO05D000476 4.2e-30 134.8 93 76.3
FAN14G0694 Fragaria x ananassa HOM05D004756 ORTHO05D005793 4.2e-30 134.8 93 76.3
FAN14G4094 Fragaria x ananassa HOM05D004756 ORTHO05D005793 4.2e-30 134.8 93 76.3
Medtr7g116300 Medicago truncatula HOM05D006721 ORTHO05D000476 5.5e-30 134.4 113 65.5
TPR.G6950 Trifolium pratense HOM05D006721 ORTHO05D000476 5.5e-30 134.4 113 65.5
BcaC01g03109 Brassica carinata HOM05D006721 ORTHO05D000476 7.1e-30 134.0 107 66.4
A03p45120 Brassica napus HOM05D006721 ORTHO05D000476 7.1e-30 134.0 108 66.7
C03p55970 Brassica napus HOM05D006721 ORTHO05D000476 7.1e-30 134.0 107 66.4
BolC3t17881H Brassica oleracea HOM05D006721 ORTHO05D000476 7.1e-30 134.0 107 66.4
BraA03t13647Z Brassica rapa HOM05D006721 ORTHO05D000476 7.1e-30 134.0 108 66.7
CAN.G186.72 Capsicum annuum HOM05D006721 ORTHO05D000476 7.1e-30 134.0 95 73.7
AUR62004887 Chenopodium quinoa HOM05D006721 ORTHO05D000476 7.1e-30 134.0 99 68.7
Thhalv10023143m.g Eutrema salsugineum HOM05D006721 ORTHO05D000476 9.3e-30 133.7 108 66.7
MD12G1244800 Malus domestica HOM05D006721 ORTHO05D000476 2.1e-29 132.5 92 75.0
Sp3g27300 Schrenkiella parvula HOM05D006721 ORTHO05D000476 2.1e-29 132.5 108 66.7
Zm00001eb301780 Zea mays HOM05D006721 ORTHO05D000476 2.1e-29 132.5 93 73.1
Carub.0003s2825 Capsella rubella HOM05D006721 ORTHO05D000476 2.7e-29 132.1 89 75.3
Cfa006323 Carpinus fangiana HOM05D006721 ORTHO05D000476 2.7e-29 132.1 84 81.0
Nitab4.5_0002651g0060 Nicotiana tabacum HOM05D006721 ORTHO05D000476 3.5e-29 131.7 121 62.0
Sc15g0002500 Simmondsia chinensis HOM05D006721 ORTHO05D000476 6.0e-29 131.0 85 78.8
AT2G14045 Arabidopsis thaliana HOM05D006721 ORTHO05D000476 1.3e-28 129.8 109 63.3
ATR0665G282 Amborella trichopoda HOM05D006721 ORTHO05D000476 1.8e-28 129.4 91 73.6
GSVIVG01014622001 Vitis vinifera HOM05D006721 ORTHO05D000476 4.3e-27 124.8 83 75.9
GSVIVG01015127001 Vitis vinifera HOM05D006721 ORTHO05D000476 1.3e-26 123.2 84 75.0
Ca_09468_v3 Cicer arietinum L. HOM05D006721 ORTHO05D000476 3.7e-26 121.7 113 63.7
Rhsim09G0138600 Rhododendron simsii HOM05D006721 ORTHO05D000476 6.3e-26 120.9 151 49.0
AL3G45710 Arabidopsis lyrata HOM05D006721 ORTHO05D000476 1.1e-25 120.2 120 56.7
Duzib128G0372 Durio zibethinus HOM05D006721 ORTHO05D000476 7.2e-22 107.5 109 60.6
Mapoly0013s0055 Marchantia polymorpha HOM05D006721 ORTHO05D000476 7.9e-21 104.0 89 58.4
SMO367G0192 Selaginella moellendorffii HOM05D001348 ORTHO05D002788 1.8e-20 102.8 87 60.9
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 5.1e-20 101.3 91 59.3
Pp3c7_11510 Physcomitrium patens HOM05D006721 ORTHO05D000476 1.9e-19 99.4 95 51.6
BraA10t43135Z Brassica rapa HOM05D006721 ORTHO05D000476 2.2e-18 95.9 85 61.2
BraA06t26268Z Brassica rapa HOM05D006721 ORTHO05D000476 3.7e-18 95.1 86 62.8
BraA09t38027Z Brassica rapa HOM05D006721 ORTHO05D000476 3.7e-18 95.1 84 61.9
A07p07050 Brassica napus HOM05D006721 ORTHO05D000476 1.4e-17 93.2 83 61.4
MELO3C004419.2 Cucumis melo HOM05D006721 ORTHO05D000476 9.0e-17 90.5 77 58.4
arahy.Tifrunner.gnm1.ann1.DA1MAK Arachis hypogaea HOM05D006721 ORTHO05D000476 1.2e-16 90.1 87 56.3
arahy.Tifrunner.gnm1.ann1.P0L55B Arachis hypogaea HOM05D006721 ORTHO05D000476 1.2e-16 90.1 87 56.3
CBR_g51472 Chara braunii HOM05D006721 ORTHO05D000476 6.5e-15 84.3 90 47.8
FAN09G4219 Fragaria x ananassa HOM05D006721 ORTHO05D000476 3.2e-14 82.0 83 53.0
A09p24350 Brassica napus HOM05D006721 ORTHO05D000476 2.7e-13 79.0 60 66.7
ClCG02G016980 Citrullus lanatus HOM05D006721 ORTHO05D000476 3.6e-13 78.6 58 62.1
MCO10G233 Micromonas commoda HOM05D006721 ORTHO05D000476 3.6e-13 78.6 83 54.2
C07p11900 Brassica napus HOM05D006721 ORTHO05D000476 4.6e-13 78.2 78 62.8
A01p30750 Brassica napus HOM05D001035 ORTHO05D000476 1.4e-12 76.6 60 65.0
BcaB06g29605 Brassica carinata HOM05D001035 ORTHO05D021752 6.7e-12 74.3 60 61.7
Zm00001eb112450 Zea mays HOM05D006721 ORTHO05D000476 6.7e-12 74.3 50 68.0
BolC7t41661H Brassica oleracea HOM05D006721 ORTHO05D000476 2.5e-11 72.4 80 58.8
PRCOL_00003504 Prasinoderma coloniale HOM05D006721 ORTHO05D000476 9.7e-11 70.5 66 56.1
Cre02.g105950 Chlamydomonas reinhardtii HOM05D006721 ORTHO05D000476 8.2e-10 67.4 71 49.3
DCAR_030976 Daucus carota HOM05D006721 ORTHO05D000476 4.5e-08 61.6 58 50.0
A05p09770 Brassica napus HOM05D006721 ORTHO05D000476 1.3e-07 60.1 47 63.8
BolC5t30890H Brassica oleracea HOM05D000263 ORTHO05D028311 6.5e-07 57.8 57 50.9
C08p15110 Brassica napus HOM05D000263 ORTHO05D028311 8.5e-07 57.4 57 50.9
BolC8t49141H Brassica oleracea HOM05D000263 ORTHO05D028311 8.5e-07 57.4 57 50.9
SHI31376 Sapria himalayana HOM05D006721 ORTHO05D000476 7.2e-06 54.3 48 58.3


User provided reference genes

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