Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 0.0e+00 1389.4 926 100.0
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 0.0e+00 1132.5 929 79.4
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 1.2e-47 196.1 293 46.1
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 2.2e-41 175.3 266 44.0
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 1.5e-40 172.6 123 67.5
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 7.2e-40 170.2 257 44.7
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 1.6e-39 169.1 170 56.5
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 8.0e-39 166.8 319 36.4
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 1.0e-38 166.4 125 67.2
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 4.0e-38 164.5 137 62.0
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 5.2e-38 164.1 219 45.7
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 6.8e-38 163.7 193 51.8
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 3.4e-37 161.4 125 66.4
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 4.4e-37 161.0 246 42.7
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 5.7e-37 160.6 220 45.0
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 2.2e-36 158.7 292 39.4
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 3.7e-36 157.9 161 55.9
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 3.7e-36 157.9 178 51.7
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 8.3e-36 156.8 159 56.6
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 8.3e-36 156.8 162 53.1
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 4.1e-35 154.5 133 59.4
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 4.1e-35 154.5 122 64.8
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 9.2e-35 153.3 124 63.7
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 1.6e-34 152.5 213 46.9
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 1.6e-34 152.5 157 55.4
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 2.0e-34 152.1 241 42.3
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 3.5e-34 151.4 238 42.9
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 3.5e-34 151.4 233 40.8
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 4.5e-34 151.0 209 44.5
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 4.5e-34 151.0 242 42.1
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 1.0e-33 149.8 288 39.6
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.9e-33 148.3 124 59.7
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 8.6e-33 146.7 245 39.6
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 1.1e-32 146.4 182 46.7
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 1.1e-32 146.4 171 52.6
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 2.5e-32 145.2 158 51.3
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 4.3e-32 144.4 126 57.9
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 1.2e-31 142.9 189 45.5
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 2.1e-31 142.1 161 49.1
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 2.8e-31 141.7 156 51.9
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 2.8e-31 141.7 176 47.7
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.8e-31 141.7 124 57.3
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 2.8e-31 141.7 124 57.3
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 3.6e-31 141.4 144 51.4
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 4.7e-31 141.0 227 41.9
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 6.1e-31 140.6 160 50.0
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 8.0e-31 140.2 175 45.1
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 1.0e-30 139.8 114 62.3
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.8e-30 139.0 161 48.4
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 1.8e-30 139.0 190 43.7
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 2.3e-30 138.7 158 49.4
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 3.0e-30 138.3 294 33.7
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 6.8e-30 137.1 164 48.2
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.5e-29 136.0 163 46.6
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 2.0e-29 135.6 133 54.1
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 4.4e-29 134.4 191 44.0
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 5.7e-29 134.0 160 48.8
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 5.7e-29 134.0 174 44.3
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 5.7e-29 134.0 202 40.6
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 7.5e-29 133.7 122 55.7
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 1.7e-28 132.5 262 40.1
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 2.9e-28 131.7 213 44.6
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 3.7e-28 131.3 108 61.1
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 6.4e-28 130.6 160 48.8
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 6.4e-28 130.6 188 42.6
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 3.2e-27 128.3 119 56.3
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 7.0e-27 127.1 125 53.6
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 9.2e-27 126.7 153 51.0
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 9.2e-27 126.7 190 41.1
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 1.2e-26 126.3 120 58.3
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.0e-26 125.6 186 41.9
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 2.7e-26 125.2 281 36.3
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 3.5e-26 124.8 219 38.8
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 4.6e-26 124.4 123 49.6
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 2.3e-25 122.1 277 35.0
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 2.8e-23 115.2 125 46.4
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 6.2e-23 114.0 242 32.6
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 8.0e-23 113.6 125 45.6
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 8.0e-23 113.6 125 46.4
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 1.0e-22 113.2 240 32.5
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 1.4e-22 112.8 125 45.6
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 2.3e-22 112.1 179 39.7
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 4.0e-22 111.3 128 45.3
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 4.0e-22 111.3 250 32.4
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 2.6e-21 108.6 134 42.5
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 7.5e-21 107.1 257 33.1
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 2.9e-20 105.1 241 32.0
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 2.4e-19 102.1 232 34.1
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.2e-18 99.8 141 37.6
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 2.0e-18 99.0 207 34.3
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 1.1e-16 93.2 134 35.8
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 4.3e-16 91.3 196 30.1
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 9.5e-16 90.1 139 36.0
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 9.5e-16 90.1 139 36.0
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 1.2e-15 89.7 226 27.9
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 2.8e-15 88.6 128 35.2
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 2.8e-15 88.6 148 39.9
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 3.6e-15 88.2 63 66.7
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 2.3e-14 85.5 184 33.7
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 1.3e-12 79.7 173 33.5
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 2.2e-12 79.0 176 32.4
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 3.7e-12 78.2 124 38.7
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 4.9e-12 77.8 181 38.1
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 3.9e-09 68.2 338 26.9
Cc06_g11350 Coffea canephora HOM05D006771 ORTHO05D008296 1.1e-08 66.6 111 38.7
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 1.2e-07 63.2 171 32.2
CBR_g20330 Chara braunii HOM05D006771 ORTHO05D008296 1.2e-07 63.2 103 34.0
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 3.1e-06 58.5 92 43.5


User provided reference genes

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