Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G0438 Papaver somniferum HOM05D006384 ORTHO05D007917 4.2e-62 241.1 117 100.0
PSO801G0099 Papaver somniferum HOM05D006384 ORTHO05D007917 1.8e-49 199.1 106 92.5
PSO339G6114 Papaver somniferum HOM05D006384 ORTHO05D007917 4.1e-49 198.0 106 91.5
CiPaw.10G132500 Carya illinoinensis HOM05D006384 ORTHO05D007917 2.7e-45 185.3 114 78.1
Phvul.001G178300 Phaseolus vulgaris HOM05D006384 ORTHO05D007917 4.7e-45 184.5 105 82.9
Actinidia40017 Actinidia chinensis HOM05D006384 ORTHO05D007917 6.1e-45 184.1 117 77.8
arahy.Tifrunner.gnm1.ann1.FRB5VT Arachis hypogaea HOM05D006384 ORTHO05D007917 1.8e-44 182.6 117 76.9
arahy.Tifrunner.gnm1.ann1.TG2889 Arachis hypogaea HOM05D006384 ORTHO05D007917 1.8e-44 182.6 117 76.9
Glyma.19G182800 Glycine max HOM05D006384 ORTHO05D007917 3.0e-44 181.8 106 82.1
Lalb_Chr20g0112661 Lupinus albus HOM05D006384 ORTHO05D007917 6.8e-44 180.6 113 76.1
Peaxi162Scf00488g00042 Petunia axillaris HOM05D006384 ORTHO05D007917 1.2e-43 179.9 114 75.4
Ca_08852_v3 Cicer arietinum L. HOM05D006384 ORTHO05D007917 2.6e-43 178.7 113 76.1
Medtr7g101760 Medicago truncatula HOM05D006384 ORTHO05D007917 3.4e-43 178.3 116 76.7
TAR369G0955 Trochodendron aralioides HOM05D006384 ORTHO05D007917 3.4e-43 178.3 118 75.4
Psat3g043320 Pisum sativum HOM05D006384 ORTHO05D007917 4.4e-43 177.9 116 76.7
VMungo1383G1856 Vigna mungo HOM05D006384 ORTHO05D007917 4.4e-43 177.9 105 80.0
CSS0039092 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 5.7e-43 177.6 117 75.2
Rhsim03G0093600 Rhododendron simsii HOM05D006384 ORTHO05D007917 5.7e-43 177.6 117 75.2
CAN.G509.15 Capsicum annuum HOM05D006384 ORTHO05D007917 7.5e-43 177.2 114 73.7
Haze_20571 Corylus avellana HOM05D006384 ORTHO05D007917 7.5e-43 177.2 114 74.6
Oeu016975.2 Olea europaea HOM05D006384 ORTHO05D007917 9.8e-43 176.8 114 72.8
Solyc10g086210.2 Solanum lycopersicum HOM05D006384 ORTHO05D007917 1.3e-42 176.4 114 73.7
Sopen10g035590 Solanum pennellii HOM05D006384 ORTHO05D007917 1.3e-42 176.4 114 73.7
MD12G1115500 Malus domestica HOM05D006384 ORTHO05D007917 1.7e-42 176.0 114 74.6
Prupe.6G234600 Prunus persica HOM05D006384 ORTHO05D007917 1.7e-42 176.0 113 73.5
TPR.G9375 Trifolium pratense HOM05D006384 ORTHO05D007917 2.2e-42 175.6 115 75.7
Lj1g0002515 Lotus japonicus HOM05D006384 ORTHO05D007917 2.8e-42 175.3 117 73.5
Thecc.05G063500 Theobroma cacao HOM05D006384 ORTHO05D007917 6.3e-42 174.1 114 71.9
Duzib093G1098 Durio zibethinus HOM05D006384 ORTHO05D007917 8.3e-42 173.7 117 71.8
Potri.006G126200 Populus trichocarpa HOM05D006384 ORTHO05D007917 8.3e-42 173.7 114 75.4
Cc06_g04070 Coffea canephora HOM05D006384 ORTHO05D007917 1.1e-41 173.3 116 71.6
Lsat_1_v5_gn_1_52961 Lactuca sativa HOM05D006384 ORTHO05D007917 1.1e-41 173.3 115 73.0
AT2G37020 Arabidopsis thaliana HOM05D006384 ORTHO05D007917 1.8e-41 172.6 114 71.9
Gohir.A04G072900 Gossypium hirsutum HOM05D006384 ORTHO05D007917 1.8e-41 172.6 116 72.4
Gorai.009G415700 Gossypium raimondii HOM05D006384 ORTHO05D007917 2.4e-41 172.2 116 72.4
HanXRQChr01g0027531 Helianthus annuus HOM05D006384 ORTHO05D007917 2.4e-41 172.2 116 71.6
Sp4g19300 Schrenkiella parvula HOM05D006384 ORTHO05D007917 2.4e-41 172.2 111 73.0
Migut.L01690 Erythranthe guttata HOM05D006384 ORTHO05D007917 3.1e-41 171.8 112 74.1
Thhalv10016975m.g Eutrema salsugineum HOM05D006384 ORTHO05D007917 3.1e-41 171.8 111 73.0
Sc20g0005270 Simmondsia chinensis HOM05D006384 ORTHO05D007917 4.1e-41 171.4 114 71.1
Nn2g11540 Nelumbo nucifera HOM05D006384 ORTHO05D007917 5.4e-41 171.0 113 72.6
FAN14G1974 Fragaria x ananassa HOM05D006384 ORTHO05D007917 7.0e-41 170.6 107 73.8
FAN14G4113 Fragaria x ananassa HOM05D006384 ORTHO05D007917 7.0e-41 170.6 107 73.8
RcHm_v2.0_Chr3g0469981 Rosa chinensis HOM05D006384 ORTHO05D007917 7.0e-41 170.6 107 74.8
MSTRG.10316 Avicennia marina HOM05D006384 ORTHO05D007917 9.1e-41 170.2 112 73.2
BcaB01g03801 Brassica carinata HOM05D006384 ORTHO05D007917 9.1e-41 170.2 106 75.5
A03p20380 Brassica napus HOM05D006384 ORTHO05D007917 9.1e-41 170.2 106 75.5
BolC3t14788H Brassica oleracea HOM05D006384 ORTHO05D007917 9.1e-41 170.2 106 75.5
BraA03t11282Z Brassica rapa HOM05D006384 ORTHO05D007917 9.1e-41 170.2 106 75.5
THA.LOC104823480 Tarenaya hassleriana HOM05D006384 ORTHO05D007917 9.1e-41 170.2 113 72.6
TWI74G0201 Tripterygium wilfordii HOM05D006384 ORTHO05D007917 9.1e-41 170.2 118 70.3
FAN02G0742 Fragaria x ananassa HOM05D006384 ORTHO05D007917 1.2e-40 169.9 107 73.8
Hund20279 Selenicereus undatus HOM05D006384 ORTHO05D007917 1.6e-40 169.5 106 76.4
Carub.0004s1888 Capsella rubella HOM05D006384 ORTHO05D007917 3.5e-40 168.3 114 71.1
Gohir.D04G111800 Gossypium hirsutum HOM05D006384 ORTHO05D007917 3.5e-40 168.3 116 70.7
FAN09G1862 Fragaria x ananassa HOM05D006384 ORTHO05D007917 4.5e-40 167.9 107 72.9
Hma1.2p1_0205F.1_g087265 Hydrangea macrophylla HOM05D006384 ORTHO05D007917 4.5e-40 167.9 116 73.3
SGA_v2.0_scaffold452G51820 Striga asiatica HOM05D006384 ORTHO05D007917 5.9e-40 167.5 113 70.8
BcaC01g05625 Brassica carinata HOM05D006384 ORTHO05D007917 7.7e-40 167.2 106 74.5
Lj2A115T51 Lonicera japonica HOM05D006384 ORTHO05D007917 7.7e-40 167.2 113 71.7
GSVIVG01025711001 Vitis vinifera HOM05D006384 ORTHO05D007917 7.7e-40 167.2 100 81.0
EL10Ac7g16562 Beta vulgaris HOM05D006384 ORTHO05D007917 1.0e-39 166.8 117 69.2
VMungo1383G2663 Vigna mungo HOM05D006384 ORTHO05D007917 1.3e-39 166.4 98 80.6
COL.COLO4_26986 Corchorus olitorius HOM05D006384 ORTHO05D001525 2.3e-39 165.6 107 71.0
Aqoxy2G01819 Aquilegia oxysepala HOM05D006384 ORTHO05D007917 3.8e-39 164.9 114 73.7
QL07p044018 Quercus lobata HOM05D006384 ORTHO05D007917 3.8e-39 164.9 141 62.4
AL4G33330 Arabidopsis lyrata HOM05D006384 ORTHO05D007917 5.0e-39 164.5 105 74.3
MELO3C009346.2 Cucumis melo HOM05D006384 ORTHO05D007917 5.0e-39 164.5 105 73.3
ATR0680G046 Amborella trichopoda HOM05D006384 ORTHO05D007917 6.6e-39 164.1 100 78.0
C03p23970 Brassica napus HOM05D006384 ORTHO05D007917 6.6e-39 164.1 105 74.3
DCAR_009302 Daucus carota HOM05D006384 ORTHO05D007917 6.6e-39 164.1 115 68.7
Aa31LG5G22260 Aethionema arabicum HOM05D006384 ORTHO05D007917 8.6e-39 163.7 113 71.7
ClCG10G020230 Citrullus lanatus HOM05D006384 ORTHO05D007917 8.6e-39 163.7 105 73.3
CsaV3_3G035870 Cucumis sativus L. HOM05D006384 ORTHO05D007917 1.5e-38 162.9 105 73.3
ECA248G2568 Erigeron canadensis HOM05D006384 ORTHO05D007917 1.5e-38 162.9 115 68.7
Os10g0443200 Oryza sativa ssp. japonica HOM05D006384 ORTHO05D007917 1.9e-38 162.5 100 76.0
AUR62040461 Chenopodium quinoa HOM05D006384 ORTHO05D007917 3.3e-38 161.8 114 68.4
CARHR131500 Cardamine hirsuta HOM05D006384 ORTHO05D007917 4.2e-38 161.4 105 72.4
vmacro07280 Vaccinium macrocarpon HOM05D006384 ORTHO05D007917 7.2e-38 160.6 157 56.7
THA.LOC104806487 Tarenaya hassleriana HOM05D006384 ORTHO05D007917 1.2e-37 159.8 103 74.8
Sed0012269 Sechium edule HOM05D006384 ORTHO05D007917 1.6e-37 159.5 105 71.4
Ah.15g092420 Amaranthus hybridus HOM05D006384 ORTHO05D007917 2.8e-37 158.7 113 69.9
Eucgr.A01141 Eucalyptus grandis HOM05D006384 ORTHO05D007917 2.8e-37 158.7 113 69.9
SalBow5G1519 Salvia bowleyana HOM05D006384 ORTHO05D007917 6.1e-37 157.5 133 62.4
SalBow5G1643 Salvia bowleyana HOM05D006384 ORTHO05D007917 6.1e-37 157.5 133 62.4
CDE06G0314 Ceratophyllum demersum HOM05D006384 ORTHO05D007917 3.0e-36 155.2 100 74.0
Atru.chr8.1840 Acer truncatum HOM05D006384 ORTHO05D007917 6.8e-36 154.1 102 71.6
HPP92_025998 Vanilla planifolia HOM05D006384 ORTHO05D007917 2.6e-35 152.1 86 81.4
SEGI_26624 Sequoiadendron giganteum HOM05D006384 ORTHO05D007917 4.1e-33 144.8 102 68.6
Nitab4.5_0002130g0050 Nicotiana tabacum HOM05D006384 ORTHO05D007917 4.5e-32 141.4 130 58.5
Nitab4.5_0000754g0290 Nicotiana tabacum HOM05D006384 ORTHO05D007917 7.8e-32 140.6 130 58.5
Mapoly0009s0045 Marchantia polymorpha HOM05D006384 ORTHO05D007917 1.7e-31 139.4 99 67.7
CANSAT80G0575 Cannabis sativa HOM05D006384 ORTHO05D007917 2.3e-31 139.0 84 78.6
AagrBONN_evm.TU.Sc2ySwM_117.2066 Anthoceros agrestis HOM05D006384 ORTHO05D007917 1.9e-30 136.0 107 61.7
CSS0008908 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 2.1e-29 132.5 80 80.0
CSS0018803 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 2.1e-29 132.5 80 80.0
Ciclev10013192m.g Citrus clementina HOM05D006384 ORTHO05D007917 2.1e-29 132.5 92 68.5
Sc20g0001670 Simmondsia chinensis HOM05D006384 ORTHO05D007917 6.8e-28 127.5 92 65.2
Dinv37301 Davidia involucrata HOM05D006384 ORTHO05D007917 1.7e-26 122.9 102 63.7
CBR_g45408 Chara braunii HOM05D006384 ORTHO05D007917 1.6e-24 116.3 103 53.4
CBR_g30715 Chara braunii HOM05D001230 ORTHO05D007917 6.0e-24 114.4 100 54.0
SMO197G0035 Selaginella moellendorffii HOM05D006384 ORTHO05D007917 4.9e-18 94.7 68 63.2
PGR004G0408 Punica granatum HOM05D006384 ORTHO05D007917 1.2e-16 90.1 52 82.7
Cfa026119 Carpinus fangiana HOM05D006384 ORTHO05D007917 1.8e-12 76.3 88 40.9
unitig_0.g684 Utricularia gibba HOM05D006384 ORTHO05D007917 6.8e-12 74.3 52 63.5
Cre12.g527850 Chlamydomonas reinhardtii HOM05D006384 ORTHO05D007917 1.9e-06 56.2 92 31.5
PRCOL_00004570 Prasinoderma coloniale HOM05D006384 ORTHO05D007917 9.5e-06 53.9 80 32.5


User provided reference genes

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