Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G0348 Papaver somniferum HOM05D010375 ORTHO05D015177 9.2e-150 533.5 262 100.0
PSO700G0133 Papaver somniferum HOM05D010375 ORTHO05D015177 5.1e-148 527.7 261 98.5
PSO478G4356 Papaver somniferum HOM05D010375 ORTHO05D015177 6.6e-132 474.2 255 92.2
PSO717G0128 Papaver somniferum HOM05D010375 ORTHO05D015177 7.1e-126 454.1 228 97.4
PSO541G4711 Papaver somniferum HOM05D010375 ORTHO05D015177 2.9e-119 432.2 214 98.6
PSO349G0233 Papaver somniferum HOM05D010375 ORTHO05D015177 8.4e-119 430.6 214 98.1
PSO170G1413 Papaver somniferum HOM05D010375 ORTHO05D015177 1.9e-110 402.9 261 80.5
PSO724G0748 Papaver somniferum HOM05D010375 ORTHO05D015177 1.5e-99 366.7 181 99.4
PSO724G1336 Papaver somniferum HOM05D010375 ORTHO05D015177 1.0e-68 264.2 131 99.2
PSO675G5178 Papaver somniferum HOM05D010375 ORTHO05D015177 6.8e-60 235.0 115 99.1
PSO724G1179 Papaver somniferum HOM05D010375 ORTHO05D015177 6.8e-60 235.0 115 99.1
PSO017G3964 Papaver somniferum HOM05D010375 ORTHO05D015177 2.3e-23 113.6 157 44.6
Rhsim10G0157200 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.2e-19 101.3 297 25.3
RcHm_v2.0_Chr7g0191841 Rosa chinensis HOM05D000539 ORTHO05D000233 4.4e-19 99.4 261 29.9
RcHm_v2.0_Chr7g0196691 Rosa chinensis HOM05D000539 ORTHO05D000233 4.4e-19 99.4 261 29.9
Rhsim02G0146100 Rhododendron simsii HOM05D000539 ORTHO05D000233 5.8e-19 99.0 297 24.9
Rhsim01G0018900 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.3e-18 97.8 275 28.0
RcHm_v2.0_Chr1g0352291 Rosa chinensis HOM05D000539 ORTHO05D000233 8.4e-18 95.1 262 27.1
RhsimUnG0164900 Rhododendron simsii HOM05D000539 ORTHO05D000233 2.4e-17 93.6 252 27.8
Rhsim01G0127800 Rhododendron simsii HOM05D000539 ORTHO05D000233 7.1e-17 92.0 284 27.1
Rhsim09G0096300 Rhododendron simsii HOM05D000539 ORTHO05D000233 7.1e-17 92.0 284 27.1
RcHm_v2.0_Chr3g0460901 Rosa chinensis HOM05D000539 ORTHO05D000233 9.3e-17 91.7 260 26.5
RcHm_v2.0_Chr4g0417051 Rosa chinensis HOM05D000539 ORTHO05D000233 1.2e-16 91.3 260 28.1
RcHm_v2.0_Chr2g0145261 Rosa chinensis HOM05D000539 ORTHO05D000233 3.5e-16 89.7 262 27.1
VMungo0251G2025 Vigna mungo HOM05D007793 ORTHO05D010104 3.5e-16 89.7 226 27.4
RcHm_v2.0_Chr4g0385451 Rosa chinensis HOM05D000539 ORTHO05D000233 1.1e-14 84.7 266 26.3
FAN06G0584 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.3e-14 83.2 243 28.0
FAN06G3425 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.3e-14 83.2 243 28.0
FAN17G0771 Fragaria x ananassa HOM05D000539 ORTHO05D000233 3.3e-14 83.2 243 28.0
FAN21G1450 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.3e-14 83.2 243 28.0
FAN23G0124 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.3e-14 83.2 243 28.0
FAN24G2468 Fragaria x ananassa HOM05D000539 ORTHO05D000233 3.3e-14 83.2 243 28.0
FAN26G1947 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.3e-14 83.2 243 28.0
FAN06G4635 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.3e-14 82.0 243 28.0
FAN13G0463 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.3e-14 82.0 243 28.0
FAN16G0584 Fragaria x ananassa HOM05D000539 ORTHO05D000233 7.3e-14 82.0 243 28.0
FAN16G3090 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.3e-14 82.0 243 28.0
FAN20G0711 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.3e-14 82.0 243 28.0
FAN23G2427 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.3e-14 82.0 243 28.0
FAN26G0996 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.3e-14 82.0 243 28.0
FAN27G0332 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.3e-14 82.0 243 28.0
FAN16G2445 Fragaria x ananassa HOM05D000539 ORTHO05D000592 9.6e-14 81.6 243 27.6
FAN23G2368 Fragaria x ananassa HOM05D000539 ORTHO05D000592 9.6e-14 81.6 243 27.6
FAN28G2676 Fragaria x ananassa HOM05D000539 ORTHO05D000592 9.6e-14 81.6 243 27.6
FAN22G1565 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.3e-13 81.3 243 27.6
FAN04G1988 Fragaria x ananassa HOM05D000539 ORTHO05D000592 2.1e-13 80.5 243 27.6
FAN26G2944 Fragaria x ananassa HOM05D000539 ORTHO05D000592 2.1e-13 80.5 227 28.6
RcHm_v2.0_Chr7g0211271 Rosa chinensis HOM05D000539 ORTHO05D000233 2.1e-13 80.5 257 26.5
FAN05G3022 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.6e-13 79.7 243 27.6
FAN07G1063 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.6e-13 79.7 218 28.4
FAN06G2632 Fragaria x ananassa HOM05D000539 ORTHO05D000592 4.8e-13 79.3 243 27.6
FAN11G2362 Fragaria x ananassa HOM05D000539 ORTHO05D000592 4.8e-13 79.3 243 27.6
FAN17G3107 Fragaria x ananassa HOM05D000539 ORTHO05D000233 6.2e-13 79.0 243 28.0
FAN26G3280 Fragaria x ananassa HOM05D000539 ORTHO05D000592 6.2e-13 79.0 243 28.0
FAN28G0602 Fragaria x ananassa HOM05D000539 ORTHO05D000592 6.2e-13 79.0 243 28.0
RcHm_v2.0_Chr6g0271071 Rosa chinensis HOM05D000539 ORTHO05D000592 6.2e-13 79.0 258 27.1
RcHm_v2.0_Chr1g0316591 Rosa chinensis HOM05D000539 ORTHO05D000592 1.1e-12 78.2 236 27.5
vmacro01527 Vaccinium macrocarpon HOM05D000539 ORTHO05D000233 1.1e-12 78.2 278 26.3
RcHm_v2.0_Chr3g0482291 Rosa chinensis HOM05D000539 ORTHO05D000592 1.4e-12 77.8 244 26.6
RcHm_v2.0_Chr7g0227321 Rosa chinensis HOM05D000539 ORTHO05D000233 1.4e-12 77.8 270 26.3
RcHm_v2.0_Chr7g0240601 Rosa chinensis HOM05D000539 ORTHO05D000592 1.4e-12 77.8 244 26.6
Rhsim08G0143200 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.8e-12 77.4 225 27.1
RcHm_v2.0_Chr5g0072991 Rosa chinensis HOM05D000539 ORTHO05D000592 4.0e-12 76.3 261 24.1
FAN08G3376 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.2e-11 74.7 258 26.4
FAN10G0147 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.2e-11 74.7 246 26.8
FAN23G1544 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.2e-11 74.7 246 26.8
CsaV3_4G007110 Cucumis sativus L. HOM05D000539 ORTHO05D000233 2.0e-11 73.9 234 25.2
FvH4_1g20221 Fragaria vesca HOM05D000539 ORTHO05D000233 4.4e-11 72.8 237 26.2
FAN03G1489 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.8e-11 72.4 243 26.7
FAN16G1455 Fragaria x ananassa HOM05D000539 ORTHO05D000592 9.9e-11 71.6 236 26.7
MELO3C016215.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.3e-10 71.2 234 24.8
FAN22G0206 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.3e-10 71.2 219 25.1
Lj2g0011920 Lotus japonicus HOM05D002644 ORTHO05D003267 1.3e-10 71.2 263 25.1
RcHm_v2.0_Chr2g0102071 Rosa chinensis HOM05D000539 ORTHO05D000592 1.7e-10 70.9 259 24.7
Lsat_1_v5_gn_8_10480 Lactuca sativa HOM05D008452 ORTHO05D010294 2.2e-10 70.5 106 37.7
RcHm_v2.0_Chr3g0495531 Rosa chinensis HOM05D000539 ORTHO05D000592 2.9e-10 70.1 265 23.0
RcHm_v2.0_Chr4g0390571 Rosa chinensis HOM05D000539 ORTHO05D000592 2.9e-10 70.1 244 25.4
FvH4_3g31624 Fragaria vesca HOM05D000539 ORTHO05D000592 4.9e-10 69.3 272 23.9
FAN23G1482 Fragaria x ananassa HOM05D000539 ORTHO05D000592 6.4e-10 68.9 236 26.3
FAN28G0205 Fragaria x ananassa HOM05D000539 ORTHO05D000592 6.4e-10 68.9 219 24.7
FAN08G0188 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.1e-09 68.2 219 25.1
Lsat_1_v5_gn_8_116720 Lactuca sativa HOM05D008452 ORTHO05D010294 1.1e-09 68.2 89 38.2
FvH4_3g14252 Fragaria vesca HOM05D000539 ORTHO05D000592 1.4e-09 67.8 253 26.1
FvH4_4g10091 Fragaria vesca HOM05D000539 ORTHO05D000592 1.4e-09 67.8 213 27.2
FAN19G2795 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.4e-09 67.8 244 24.2
PSO541G5385 Papaver somniferum HOM05D000539 ORTHO05D000233 1.4e-09 67.8 143 28.0
RcHm_v2.0_Chr7g0235651 Rosa chinensis HOM05D000539 ORTHO05D000233 1.9e-09 67.4 242 26.4
PSO675G7387 Papaver somniferum HOM05D000539 ORTHO05D000233 2.4e-09 67.0 131 28.2
Lsat_1_v5_gn_1_8180 Lactuca sativa HOM05D008452 ORTHO05D010294 3.2e-09 66.6 82 40.2
CANSAT64G2916 Cannabis sativa HOM05D000539 ORTHO05D013821 4.2e-09 66.2 287 24.7
RcHm_v2.0_Chr2g0114971 Rosa chinensis HOM05D000539 ORTHO05D000592 4.2e-09 66.2 249 23.7
Atru.chr2.3648 Acer truncatum HOM05D000539 ORTHO05D000592 5.4e-09 65.9 131 32.1
Rhsim08G0058700 Rhododendron simsii HOM05D000539 ORTHO05D000592 5.4e-09 65.9 136 29.4
FvH4_3g19213 Fragaria vesca HOM05D000539 ORTHO05D000233 7.1e-09 65.5 231 25.5
FAN18G4025 Fragaria x ananassa HOM05D000539 ORTHO05D000592 9.3e-09 65.1 218 23.9
RcHm_v2.0_Chr5g0072071 Rosa chinensis HOM05D000539 ORTHO05D000592 9.3e-09 65.1 258 24.4
FvH4_2g18191 Fragaria vesca HOM05D000539 ORTHO05D000233 1.6e-08 64.3 166 27.1
FAN14G5321 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.6e-08 64.3 207 24.6
PSO782G4622 Papaver somniferum HOM05D010879 ORTHO05D010294 1.6e-08 64.3 82 36.6
VMungo0464G1009 Vigna mungo HOM05D007793 ORTHO05D010104 1.6e-08 64.3 226 23.9
Lsat_1_v5_gn_5_25601 Lactuca sativa HOM05D008452 ORTHO05D010294 2.1e-08 63.9 81 43.2
Medtr2g092960 Medicago truncatula HOM05D007793 ORTHO05D010104 2.1e-08 63.9 239 24.3
PSO017G7209 Papaver somniferum HOM05D010879 ORTHO05D010294 2.1e-08 63.9 86 36.0
PSO063G2271 Papaver somniferum HOM05D010879 ORTHO05D010294 2.1e-08 63.9 86 36.0
PSO210G4529 Papaver somniferum HOM05D010879 ORTHO05D010294 2.1e-08 63.9 86 36.0
PSO223G0075 Papaver somniferum HOM05D010879 ORTHO05D010294 2.1e-08 63.9 86 36.0
PSO339G0939 Papaver somniferum HOM05D010879 ORTHO05D010294 2.1e-08 63.9 86 36.0
PSO339G6517 Papaver somniferum HOM05D010879 ORTHO05D010294 2.1e-08 63.9 86 36.0
PSO384G2643 Papaver somniferum HOM05D010879 ORTHO05D010294 2.1e-08 63.9 86 36.0
PSO423G0281 Papaver somniferum HOM05D010879 ORTHO05D010294 2.1e-08 63.9 86 36.0
PSO675G4514 Papaver somniferum HOM05D010879 ORTHO05D010294 2.1e-08 63.9 86 36.0
PSO675G8923 Papaver somniferum HOM05D010879 ORTHO05D010294 2.1e-08 63.9 86 36.0
PSO724G0648 Papaver somniferum HOM05D010879 ORTHO05D010294 2.1e-08 63.9 86 36.0
PSO761G0148 Papaver somniferum HOM05D010879 ORTHO05D010294 2.1e-08 63.9 86 36.0
PSO781G0306 Papaver somniferum HOM05D010879 ORTHO05D010294 2.1e-08 63.9 86 36.0
PSO832G0405 Papaver somniferum HOM05D010879 ORTHO05D010294 2.1e-08 63.9 86 36.0
PSO832G1619 Papaver somniferum HOM05D010879 ORTHO05D010294 2.1e-08 63.9 86 36.0
Lsat_1_v5_gn_3_84721 Lactuca sativa HOM05D008452 ORTHO05D010294 3.5e-08 63.2 134 32.8
Rhsim01G0018800 Rhododendron simsii HOM05D000539 ORTHO05D000233 3.5e-08 63.2 198 26.8
PSO675G7919 Papaver somniferum HOM05D010879 ORTHO05D010294 6.0e-08 62.4 78 38.5
FvH4_3g31712 Fragaria vesca HOM05D000539 ORTHO05D000592 7.8e-08 62.0 212 25.9
PSO170G1580 Papaver somniferum HOM05D022837 ORTHO05D000592 7.8e-08 62.0 108 31.5
FAN28G1329 Fragaria x ananassa HOM05D000723 ORTHO05D001760 1.0e-07 61.6 239 21.8
RcHm_v2.0_Chr5g0043821 Rosa chinensis HOM05D000539 ORTHO05D000592 1.0e-07 61.6 237 24.1
Lsat_1_v5_gn_9_54600 Lactuca sativa HOM05D008452 ORTHO05D010294 1.3e-07 61.2 80 36.2
RcHm_v2.0_Chr3g0483461 Rosa chinensis HOM05D000539 ORTHO05D000233 1.3e-07 61.2 257 23.0
RcHm_v2.0_Chr4g0395771 Rosa chinensis HOM05D000539 ORTHO05D000592 1.3e-07 61.2 262 23.7
PSO455G0104 Papaver somniferum HOM05D022837 ORTHO05D000233 1.7e-07 60.8 108 32.4
Atru.chr1.738 Acer truncatum HOM05D000539 ORTHO05D000592 3.0e-07 60.1 106 33.0
PSO063G5393 Papaver somniferum HOM05D022837 ORTHO05D000233 5.1e-07 59.3 127 28.3
Hma1.2p1_0013F.1_g008410 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 6.6e-07 58.9 295 25.4
RhsimUnG0218400 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.5e-06 57.0 201 25.9
FAN22G1432 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.3e-06 56.6 205 25.4
Lsat_1_v5_gn_2_7701 Lactuca sativa HOM05D000539 ORTHO05D000592 4.3e-06 56.2 130 33.1
PSO210G5528 Papaver somniferum HOM05D010879 ORTHO05D010294 4.3e-06 56.2 69 36.2
PSO455G0142 Papaver somniferum HOM05D000539 ORTHO05D000233 4.3e-06 56.2 126 27.8
CANSAT80G2084 Cannabis sativa HOM05D000539 ORTHO05D000592 5.6e-06 55.8 232 25.9
DCAR_031512 Daucus carota HOM05D000539 ORTHO05D000592 5.6e-06 55.8 135 25.2
FAN19G1975 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.6e-06 55.8 261 23.8
RcHm_v2.0_Chr2g0160781 Rosa chinensis HOM05D000539 ORTHO05D010294 5.6e-06 55.8 78 43.6
TPR.G687 Trifolium pratense HOM05D007793 ORTHO05D010104 5.6e-06 55.8 101 31.7
PSO528G0157 Papaver somniferum HOM05D010879 ORTHO05D010294 7.3e-06 55.5 69 36.2
FAN22G0175 Fragaria x ananassa HOM05D000539 ORTHO05D000592 9.6e-06 55.1 266 22.6
HanXRQChr03g0077561 Helianthus annuus HOM05D008452 ORTHO05D010294 9.6e-06 55.1 75 40.0
HanXRQChr04g0119771 Helianthus annuus HOM05D008452 ORTHO05D010294 9.6e-06 55.1 75 40.0
HanXRQChr05g0158771 Helianthus annuus HOM05D008452 ORTHO05D010294 9.6e-06 55.1 75 40.0
HanXRQChr11g0349201 Helianthus annuus HOM05D008452 ORTHO05D010294 9.6e-06 55.1 75 40.0
HanXRQChr17g0547341 Helianthus annuus HOM05D008452 ORTHO05D010294 9.6e-06 55.1 75 40.0


User provided reference genes

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