Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G0345 Papaver somniferum HOM05D005262 ORTHO05D006590 6.1e-103 377.5 189 100.0
PSO063G7616 Papaver somniferum HOM05D005262 ORTHO05D006590 6.7e-102 374.0 189 98.9
Oeu054855.1 Olea europaea HOM05D005262 ORTHO05D006590 2.3e-78 295.8 186 76.9
TAR496G0001 Trochodendron aralioides HOM05D005262 ORTHO05D006590 2.3e-78 295.8 182 78.6
TAR629G1254 Trochodendron aralioides HOM05D005262 ORTHO05D006590 2.3e-78 295.8 182 78.6
Aqoxy1G02417 Aquilegia oxysepala HOM05D005262 ORTHO05D006590 3.0e-78 295.4 189 76.7
CSS0022308 Camellia sinensis var. sinensis HOM05D005262 ORTHO05D006590 2.6e-77 292.4 189 74.6
Aqoxy2G00811 Aquilegia oxysepala HOM05D005262 ORTHO05D006590 9.8e-77 290.4 189 74.6
QL03p069106 Quercus lobata HOM05D005262 ORTHO05D006590 9.8e-77 290.4 188 75.0
QL93p1999_0168 Quercus lobata HOM05D005262 ORTHO05D006590 9.8e-77 290.4 188 75.0
Dinv34128 Davidia involucrata HOM05D005262 ORTHO05D006590 2.2e-76 289.3 189 74.6
Solyc07g017410.3 Solanum lycopersicum HOM05D005262 ORTHO05D006590 2.4e-75 285.8 189 74.1
Sopen07g006120 Solanum pennellii HOM05D005262 ORTHO05D006590 2.4e-75 285.8 189 74.1
CiPaw.05G130500 Carya illinoinensis HOM05D005262 ORTHO05D006590 3.1e-75 285.4 186 75.8
PGSC0003DMG400009555 Solanum tuberosum HOM05D005262 ORTHO05D006590 3.1e-75 285.4 189 74.1
CAN.G293.9 Capsicum annuum HOM05D005262 ORTHO05D006590 4.1e-75 285.0 189 73.5
TAR365G0711 Trochodendron aralioides HOM05D005262 ORTHO05D006590 9.2e-75 283.9 187 75.4
ClCG00G005120 Citrullus lanatus HOM05D005262 ORTHO05D006590 1.2e-74 283.5 189 75.7
ClCG05G024080 Citrullus lanatus HOM05D005262 ORTHO05D006590 1.2e-74 283.5 189 75.7
Nitab4.5_0001147g0090 Nicotiana tabacum HOM05D005262 ORTHO05D006590 4.5e-74 281.6 189 73.0
Nitab4.5_0005903g0020 Nicotiana tabacum HOM05D005262 ORTHO05D006590 7.8e-74 280.8 189 73.5
GSVIVG01005152001 Vitis vinifera HOM05D005262 ORTHO05D006590 1.3e-73 280.0 188 72.3
HPP92_008614 Vanilla planifolia HOM05D005262 ORTHO05D006590 2.9e-73 278.9 187 71.7
Peaxi162Scf00320g00123 Petunia axillaris HOM05D005262 ORTHO05D006590 3.8e-73 278.5 204 69.1
Cpa.g.sc57.36 Carica papaya HOM05D005262 ORTHO05D006590 5.0e-73 278.1 189 70.9
Sc04g0007950 Simmondsia chinensis HOM05D005262 ORTHO05D006590 5.0e-73 278.1 189 71.4
MELO3C012117.2 Cucumis melo HOM05D005262 ORTHO05D006590 6.6e-73 277.7 189 73.5
GSVIVG01012217001 Vitis vinifera HOM05D005262 ORTHO05D006590 8.6e-73 277.3 189 70.9
Cc00_g16620 Coffea canephora HOM05D005262 ORTHO05D006590 5.6e-72 274.6 189 68.8
MD07G1136300 Malus domestica HOM05D005262 ORTHO05D006590 5.6e-72 274.6 187 72.2
CsaV3_5G032960 Cucumis sativus L. HOM05D005262 ORTHO05D006590 7.3e-72 274.2 186 73.7
Sed0024226 Sechium edule HOM05D005262 ORTHO05D006590 7.3e-72 274.2 187 73.3
ATR0810G029 Amborella trichopoda HOM05D005262 ORTHO05D006590 2.1e-71 272.7 188 71.8
Lj8C474T0 Lonicera japonica HOM05D005262 ORTHO05D006590 2.8e-71 272.3 187 70.6
Cfa008943 Carpinus fangiana HOM05D005262 ORTHO05D006590 3.6e-71 271.9 189 71.4
Lj7A251G27 Lonicera japonica HOM05D005262 ORTHO05D006590 6.1e-71 271.2 187 70.1
MD01G1063000 Malus domestica HOM05D005262 ORTHO05D006590 8.0e-71 270.8 187 71.7
Os12g0209100 Oryza sativa ssp. japonica HOM05D005262 ORTHO05D006590 1.0e-70 270.4 182 69.2
TWI59G0657 Tripterygium wilfordii HOM05D005262 ORTHO05D006590 1.0e-70 270.4 189 69.8
TWI23G0893 Tripterygium wilfordii HOM05D005262 ORTHO05D006590 1.2e-69 266.9 189 68.3
Prupe.2G171300 Prunus persica HOM05D005262 ORTHO05D006590 2.0e-69 266.2 187 71.1
Lj7C254T2 Lonicera japonica HOM05D005262 ORTHO05D006590 2.6e-69 265.8 188 69.7
Ciclev10032849m.g Citrus clementina HOM05D005262 ORTHO05D006590 4.4e-69 265.0 189 68.3
DCAR_013139 Daucus carota HOM05D005262 ORTHO05D006590 7.5e-69 264.2 187 69.5
Hma1.2p1_1954F.1_g308920 Hydrangea macrophylla HOM05D005262 ORTHO05D006590 7.5e-69 264.2 207 63.3
Lj8C444T0 Lonicera japonica HOM05D005262 ORTHO05D006590 1.3e-68 263.5 209 63.6
HanXRQChr15g0476911 Helianthus annuus HOM05D005262 ORTHO05D006590 1.7e-68 263.1 187 70.1
Thecc.10G075900 Theobroma cacao HOM05D005262 ORTHO05D006590 1.7e-68 263.1 189 69.8
SGA_v2.0_scaffold25G10746 Striga asiatica HOM05D005262 ORTHO05D006590 2.9e-68 262.3 183 68.9
HanXRQChr17g0545311 Helianthus annuus HOM05D005262 ORTHO05D006590 6.4e-68 261.2 185 70.8
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 8.3e-68 260.8 187 67.9
EL10Ac8g18975 Beta vulgaris HOM05D005262 ORTHO05D006590 1.1e-67 260.4 182 72.0
Atru.chr11.1609 Acer truncatum HOM05D005262 ORTHO05D006590 1.4e-67 260.0 184 70.1
Rhsim09G0138500 Rhododendron simsii HOM05D005262 ORTHO05D006590 1.4e-67 260.0 182 71.4
Migut.O00263 Erythranthe guttata HOM05D005262 ORTHO05D006590 1.9e-67 259.6 183 69.4
AUR62032822 Chenopodium quinoa HOM05D005262 ORTHO05D006590 2.4e-67 259.2 182 70.3
Duzib114G0995 Durio zibethinus HOM05D005262 ORTHO05D006590 3.2e-67 258.8 189 68.8
Potri.010G165500 Populus trichocarpa HOM05D005262 ORTHO05D006590 4.1e-67 258.5 182 69.8
PGR102G3250 Punica granatum HOM05D005262 ORTHO05D006590 9.2e-67 257.3 184 69.0
Gohir.D04G003700 Gossypium hirsutum HOM05D005262 ORTHO05D006590 2.7e-66 255.8 189 68.8
Gorai.012G004900 Gossypium raimondii HOM05D005262 ORTHO05D006590 2.7e-66 255.8 189 68.8
Nn4g23238 Nelumbo nucifera HOM05D005262 ORTHO05D006590 2.7e-66 255.8 173 74.6
Gohir.A05G412300 Gossypium hirsutum HOM05D005262 ORTHO05D006590 2.3e-65 252.7 175 71.4
MSTRG.11557 Avicennia marina HOM05D005262 ORTHO05D006590 3.9e-65 251.9 183 67.2
SGA_v2.0_scaffold90G27753 Striga asiatica HOM05D005262 ORTHO05D006590 5.0e-65 251.5 183 66.7
VMungo1215G2947 Vigna mungo HOM05D005262 ORTHO05D006590 8.6e-65 250.8 189 66.7
Gohir.A10G054500 Gossypium hirsutum HOM05D005262 ORTHO05D006590 1.5e-64 250.0 189 67.2
TPR.G4647 Trifolium pratense HOM05D005262 ORTHO05D006590 1.5e-64 250.0 189 65.6
Lj6g0009238 Lotus japonicus HOM05D005262 ORTHO05D006590 3.3e-64 248.8 189 65.1
Ca_02973_v3 Cicer arietinum L. HOM05D005262 ORTHO05D006590 4.3e-64 248.4 189 65.6
Lsat_1_v5_gn_3_51960 Lactuca sativa HOM05D005262 ORTHO05D006590 9.5e-64 247.3 182 67.0
Zm00001eb163570 Zea mays HOM05D005262 ORTHO05D006590 9.5e-64 247.3 182 65.4
Lj2g0009005 Lotus japonicus HOM05D005262 ORTHO05D006590 1.2e-63 246.9 189 64.6
Manes.01G033800 Manihot esculenta HOM05D005262 ORTHO05D006590 3.6e-63 245.4 190 62.6
Glyma.01G052200 Glycine max HOM05D005262 ORTHO05D006590 4.7e-63 245.0 187 66.3
FAN26G2856 Fragaria x ananassa HOM05D005262 ORTHO05D006590 8.0e-63 244.2 188 65.4
Lalb_Chr12g0202851 Lupinus albus HOM05D005262 ORTHO05D006590 1.1e-62 243.8 174 67.2
Sabra10G0125800 Salix brachista HOM05D005262 ORTHO05D006590 1.1e-62 243.8 204 61.3
Psat1g094200 Pisum sativum HOM05D005262 ORTHO05D006590 1.4e-62 243.4 189 64.6
Gorai.011G060300 Gossypium raimondii HOM05D005262 ORTHO05D006590 3.1e-62 242.3 177 67.8
FAN19G1549 Fragaria x ananassa HOM05D005262 ORTHO05D006590 4.0e-62 241.9 188 65.4
arahy.Tifrunner.gnm1.ann1.EK09V6 Arachis hypogaea HOM05D005262 ORTHO05D006590 8.9e-62 240.7 203 61.6
FAN23G1362 Fragaria x ananassa HOM05D005262 ORTHO05D006590 8.9e-62 240.7 188 65.4
Glyma.02G110400 Glycine max HOM05D005262 ORTHO05D006590 8.9e-62 240.7 187 64.7
CANSAT80G0446 Cannabis sativa HOM05D005262 ORTHO05D006590 1.2e-61 240.4 175 66.9
arahy.Tifrunner.gnm1.ann1.XG4VM3 Arachis hypogaea HOM05D005262 ORTHO05D006590 1.5e-61 240.0 203 61.1
SEGI_18406 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 1.5e-61 240.0 180 64.4
COL.COLO4_28415 Corchorus olitorius HOM05D005262 ORTHO05D006590 3.4e-61 238.8 177 65.5
QL07p005102 Quercus lobata HOM05D005262 ORTHO05D006590 4.4e-61 238.4 155 74.2
FvH4_1g30250 Fragaria vesca HOM05D005262 ORTHO05D006590 7.5e-61 237.7 188 64.4
Phvul.003G046600 Phaseolus vulgaris HOM05D005262 ORTHO05D006590 1.3e-60 236.9 189 64.0
unitig_749.g14151 Utricularia gibba HOM05D005262 ORTHO05D006590 1.3e-60 236.9 183 62.8
SalBow6G1526 Salvia bowleyana HOM05D005262 ORTHO05D006590 2.2e-60 236.1 183 62.8
CDE02G1435 Ceratophyllum demersum HOM05D005262 ORTHO05D006590 2.4e-59 232.6 188 61.7
Medtr2g087760 Medicago truncatula HOM05D005262 ORTHO05D006590 9.2e-59 230.7 174 64.4
Medtr8g006800 Medicago truncatula HOM05D005262 ORTHO05D006590 1.2e-58 230.3 174 63.8
Hund04408 Selenicereus undatus HOM05D005262 ORTHO05D006590 4.6e-58 228.4 271 49.4
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 6.0e-58 228.0 192 61.5
Haze_11969 Corylus avellana HOM05D001063 ORTHO05D000986 2.8e-55 219.2 156 68.6
THA.LOC104818198 Tarenaya hassleriana HOM05D005262 ORTHO05D006590 6.2e-55 218.0 186 54.8
CARHR025210 Cardamine hirsuta HOM05D005262 ORTHO05D006590 1.9e-51 206.5 187 54.5
Eucgr.I00218 Eucalyptus grandis HOM05D005262 ORTHO05D006590 3.2e-51 205.7 165 63.0
Carub.0001s2427 Capsella rubella HOM05D005262 ORTHO05D006590 7.1e-51 204.5 187 54.0
Aa31LG7G8380 Aethionema arabicum HOM05D005262 ORTHO05D006590 9.2e-51 204.1 187 54.5
AL1G38960 Arabidopsis lyrata HOM05D005262 ORTHO05D006590 1.2e-50 203.8 182 54.9
Thhalv10008835m.g Eutrema salsugineum HOM05D005262 ORTHO05D006590 1.7e-49 199.9 187 54.0
AT1G26750 Arabidopsis thaliana HOM05D005262 ORTHO05D006590 1.1e-48 197.2 182 53.8
Sp1g22060 Schrenkiella parvula HOM05D005262 ORTHO05D006590 9.5e-48 194.1 187 52.4
CAN.G228.3 Capsicum annuum HOM05D005262 ORTHO05D006590 2.4e-46 189.5 205 52.2
vmacro10351 Vaccinium macrocarpon HOM05D005262 ORTHO05D006590 6.8e-46 188.0 182 57.7
A07p13080 Brassica napus HOM05D005262 ORTHO05D006590 2.6e-45 186.0 187 51.3
BraA07t29079Z Brassica rapa HOM05D005262 ORTHO05D006590 9.9e-45 184.1 187 51.3
BcaC06g35126 Brassica carinata HOM05D005262 ORTHO05D006590 1.9e-43 179.9 187 50.3
BcaB03g14087 Brassica carinata HOM05D005262 ORTHO05D006590 5.4e-43 178.3 187 49.7
C07p19560 Brassica napus HOM05D005262 ORTHO05D006590 5.4e-43 178.3 187 49.7
BolC7t42473H Brassica oleracea HOM05D005262 ORTHO05D006590 5.4e-43 178.3 187 49.7
C05p24220 Brassica napus HOM05D005262 ORTHO05D006590 2.7e-42 176.0 187 49.7
RcHm_v2.0_Chr6g0271051 Rosa chinensis HOM05D005262 ORTHO05D006590 4.6e-42 175.3 172 57.0
A09p40160 Brassica napus HOM05D005262 ORTHO05D006590 3.9e-41 172.2 187 48.1
BraA09t39514Z Brassica rapa HOM05D005262 ORTHO05D006590 3.9e-41 172.2 187 48.1
BolC5t31158H Brassica oleracea HOM05D005262 ORTHO05D006590 1.5e-37 160.2 148 55.4
Eucgr.L00661 Eucalyptus grandis HOM05D005262 ORTHO05D006590 3.4e-37 159.1 114 71.1
Gohir.D10G056500 Gossypium hirsutum HOM05D005262 ORTHO05D006590 4.6e-34 148.7 155 55.5
BcaC05g26391 Brassica carinata HOM05D005262 ORTHO05D006590 3.0e-33 146.0 187 45.5
ClCG08G001930 Citrullus lanatus HOM05D005262 ORTHO05D006590 1.4e-30 137.1 116 64.7
Oeu021067.1 Olea europaea HOM05D005262 ORTHO05D006590 3.2e-27 125.9 78 73.1
Haze_01349 Corylus avellana HOM05D005262 ORTHO05D006590 1.9e-24 116.7 102 60.8
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 6.9e-22 108.2 80 66.2
SEGI_29332 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 9.0e-22 107.8 89 58.4
Pp3c14_7320 Physcomitrium patens HOM05D005262 ORTHO05D006590 1.5e-21 107.1 157 40.1
AagrBONN_evm.TU.Sc2ySwM_228.1458 Anthoceros agrestis HOM05D005262 ORTHO05D006590 3.4e-21 105.9 151 42.4
Glyma.11G251200 Glycine max HOM05D005262 ORTHO05D006590 1.1e-19 100.9 74 62.2
RcHm_v2.0_Chr7g0220341 Rosa chinensis HOM05D005262 ORTHO05D006590 5.5e-19 98.6 86 58.1
SEGI_36558 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 3.5e-18 95.9 78 57.7
SEGI_23137 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 4.6e-18 95.5 83 56.6
CBR_g30169 Chara braunii HOM05D005262 ORTHO05D006590 1.0e-17 94.4 161 36.0
SEGI_39727 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 3.9e-17 92.4 76 56.6
RcHm_v2.0_Chr7g0220351 Rosa chinensis HOM05D005262 ORTHO05D006590 1.9e-16 90.1 61 70.5
Mapoly0001s0053 Marchantia polymorpha HOM05D005262 ORTHO05D006590 2.1e-15 86.7 120 39.2
SHI20784 Sapria himalayana HOM05D005262 ORTHO05D006590 1.4e-11 73.9 97 45.4
Eucgr.L00657 Eucalyptus grandis HOM05D005262 ORTHO05D006590 2.3e-09 66.6 88 48.9
FAN15G0396 Fragaria x ananassa HOM05D005262 ORTHO05D006590 1.9e-08 63.5 66 50.0
Zm00001eb076020 Zea mays HOM05D005262 ORTHO05D444176 6.3e-07 58.5 45 62.2
SEGI_11566 Sequoiadendron giganteum HOM05D005262 ORTHO05D386188 4.1e-06 55.8 51 49.0


User provided reference genes

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