Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G0344 Papaver somniferum HOM05D005786 ORTHO05D006946 1.3e-171 606.3 300 100.0
PSO210G0333 Papaver somniferum HOM05D005786 ORTHO05D006946 5.9e-169 597.4 300 98.7
Nn7g37593 Nelumbo nucifera HOM05D005786 ORTHO05D006946 6.5e-107 391.3 290 70.0
TAR633G0414 Trochodendron aralioides HOM05D005786 ORTHO05D006946 6.5e-107 391.3 296 68.6
Duzib235G1473 Durio zibethinus HOM05D005786 ORTHO05D006946 1.4e-106 390.2 304 68.4
Dinv29083 Davidia involucrata HOM05D005786 ORTHO05D006946 2.5e-106 389.4 303 68.0
Gohir.A02G112711 Gossypium hirsutum HOM05D005786 ORTHO05D006946 5.5e-106 388.3 303 67.7
Thecc.05G189200 Theobroma cacao HOM05D005786 ORTHO05D006946 5.5e-106 388.3 304 67.1
Gohir.D03G060604 Gossypium hirsutum HOM05D005786 ORTHO05D006946 1.2e-105 387.1 293 68.3
Aqoxy5G04319 Aquilegia oxysepala HOM05D005786 ORTHO05D006946 2.1e-105 386.3 302 66.6
MD04G1246900 Malus domestica HOM05D005786 ORTHO05D006946 4.6e-105 385.2 305 66.6
CSS0002276 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 7.9e-105 384.4 320 65.6
Gorai.002G056000 Gossypium raimondii HOM05D005786 ORTHO05D006946 7.9e-105 384.4 306 67.3
FvH4_6g00240 Fragaria vesca HOM05D005786 ORTHO05D006946 6.7e-104 381.3 295 65.1
Actinidia06794 Actinidia chinensis HOM05D005786 ORTHO05D006946 1.9e-103 379.8 294 68.4
MD12G1263300 Malus domestica HOM05D005786 ORTHO05D006946 7.4e-103 377.9 304 64.8
Ciclev10012322m.g Citrus clementina HOM05D005786 ORTHO05D006946 9.7e-103 377.5 290 69.0
BcaB06g27020 Brassica carinata HOM05D005786 ORTHO05D006946 1.3e-102 377.1 293 66.9
Prupe.6G363100 Prunus persica HOM05D005786 ORTHO05D006946 1.6e-102 376.7 302 67.2
Cfa006249 Carpinus fangiana HOM05D005786 ORTHO05D006946 3.7e-102 375.6 290 67.6
CiPaw.07G082100 Carya illinoinensis HOM05D005786 ORTHO05D006946 3.7e-102 375.6 296 67.2
Manes.13G003500 Manihot esculenta HOM05D005786 ORTHO05D006946 4.8e-102 375.2 301 67.1
GSVIVG01019061001 Vitis vinifera HOM05D005786 ORTHO05D006946 6.3e-102 374.8 306 66.0
Potri.019G055100 Populus trichocarpa HOM05D005786 ORTHO05D006946 1.1e-101 374.0 285 69.5
Lj1A579T43 Lonicera japonica HOM05D005786 ORTHO05D006946 1.4e-101 373.6 350 59.1
CANSAT54G1960 Cannabis sativa HOM05D005786 ORTHO05D006946 2.4e-101 372.9 291 67.0
THA.LOC104805701 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 2.4e-101 372.9 294 67.3
RcHm_v2.0_Chr3g0447611 Rosa chinensis HOM05D005786 ORTHO05D006946 3.1e-101 372.5 293 65.2
PGR031G0068 Punica granatum HOM05D005786 ORTHO05D006946 4.1e-101 372.1 281 68.3
Hund07363 Selenicereus undatus HOM05D005786 ORTHO05D006946 4.1e-101 372.1 310 63.5
Carub.0002s1084 Capsella rubella HOM05D005786 ORTHO05D006946 2.0e-100 369.8 295 64.1
Oeu034777.1 Olea europaea HOM05D005786 ORTHO05D006946 2.0e-100 369.8 295 66.4
BcaC02g09515 Brassica carinata HOM05D005786 ORTHO05D006946 2.6e-100 369.4 287 66.6
Dinv15702 Davidia involucrata HOM05D005786 ORTHO05D006946 2.6e-100 369.4 309 65.4
C04p43640 Brassica napus HOM05D005786 ORTHO05D006946 3.4e-100 369.0 287 66.6
Ca_08003_v3 Cicer arietinum L. HOM05D005786 ORTHO05D006946 5.9e-100 368.2 310 66.1
AL2G20300 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 7.7e-100 367.9 286 65.7
THA.LOC104823809 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 7.7e-100 367.9 269 68.4
Aa31LG2G2390 Aethionema arabicum HOM05D005786 ORTHO05D006946 1.0e-99 367.5 292 64.0
BraA04t16680Z Brassica rapa HOM05D005786 ORTHO05D006946 1.3e-99 367.1 278 67.6
Medtr7g080350 Medicago truncatula HOM05D005786 ORTHO05D006946 2.9e-99 365.9 309 65.0
Sc16g0010480 Simmondsia chinensis HOM05D005786 ORTHO05D006946 2.9e-99 365.9 291 66.7
A04p10160 Brassica napus HOM05D005786 ORTHO05D006946 8.5e-99 364.4 292 65.1
Phvul.008G052600 Phaseolus vulgaris HOM05D005786 ORTHO05D006946 1.4e-98 363.6 304 63.8
BcaB05g24100 Brassica carinata HOM05D005786 ORTHO05D006946 1.9e-98 363.2 274 67.5
AT1G65270 Arabidopsis thaliana HOM05D005786 ORTHO05D006946 2.5e-98 362.8 286 64.3
arahy.Tifrunner.gnm1.ann1.K5KE50 Arachis hypogaea HOM05D005786 ORTHO05D006946 3.2e-98 362.5 298 64.1
Lalb_Chr03g0038061 Lupinus albus HOM05D005786 ORTHO05D006946 3.2e-98 362.5 294 63.9
CARHR056920 Cardamine hirsuta HOM05D005786 ORTHO05D006946 4.2e-98 362.1 282 64.5
Sp7g05900 Schrenkiella parvula HOM05D005786 ORTHO05D006946 4.2e-98 362.1 291 65.6
TWI18G0853 Tripterygium wilfordii HOM05D005786 ORTHO05D006946 4.2e-98 362.1 290 64.8
arahy.Tifrunner.gnm1.ann1.BC747V Arachis hypogaea HOM05D005786 ORTHO05D006946 5.5e-98 361.7 298 63.8
VMungo1383G2134 Vigna mungo HOM05D005786 ORTHO05D006946 9.4e-98 360.9 293 63.1
Cc09_g03910 Coffea canephora HOM05D005786 ORTHO05D006946 1.2e-97 360.5 305 61.0
Thhalv10004459m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 1.6e-97 360.1 286 65.0
TPR.G33911 Trifolium pratense HOM05D005786 ORTHO05D006946 2.1e-97 359.8 284 66.2
Thhalv10018947m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 3.6e-97 359.0 296 63.5
Atru.chr12.1725 Acer truncatum HOM05D005786 ORTHO05D006946 1.4e-96 357.1 263 69.6
Sp5g19940 Schrenkiella parvula HOM05D005786 ORTHO05D006946 1.8e-96 356.7 288 63.2
BraA02t06369Z Brassica rapa HOM05D005786 ORTHO05D006946 1.1e-95 354.0 284 63.7
Lj1g0012134 Lotus japonicus HOM05D005786 ORTHO05D006946 1.5e-95 353.6 290 64.1
CAN.G37.2 Capsicum annuum HOM05D005786 ORTHO05D006946 2.0e-95 353.2 295 65.4
Glyma.18G244000 Glycine max HOM05D005786 ORTHO05D006946 2.0e-95 353.2 276 65.6
A02p13150 Brassica napus HOM05D005786 ORTHO05D006946 9.7e-95 350.9 281 64.4
ECA232G2695 Erigeron canadensis HOM05D005786 ORTHO05D006946 1.3e-94 350.5 291 65.3
Sabra19G0064300 Salix brachista HOM05D005786 ORTHO05D006946 1.3e-94 350.5 328 60.1
MSTRG.335 Avicennia marina HOM05D005786 ORTHO05D006946 3.7e-94 349.0 298 63.1
Glyma.09G248700 Glycine max HOM05D005786 ORTHO05D006946 4.8e-94 348.6 278 63.7
FAN05G2398 Fragaria x ananassa HOM05D005786 ORTHO05D006946 6.3e-94 348.2 314 59.6
FAN09G1835 Fragaria x ananassa HOM05D005786 ORTHO05D006946 3.1e-93 345.9 314 58.9
Migut.F01861 Erythranthe guttata HOM05D005786 ORTHO05D006946 4.1e-93 345.5 304 63.5
Sopen04g017810 Solanum pennellii HOM05D005786 ORTHO05D006946 5.3e-93 345.1 286 66.1
Nitab4.5_0003825g0070 Nicotiana tabacum HOM05D005786 ORTHO05D006946 9.1e-93 344.4 293 63.5
HanXRQChr04g0101081 Helianthus annuus HOM05D005786 ORTHO05D006946 1.5e-92 343.6 304 62.2
DCAR_030004 Daucus carota HOM05D005786 ORTHO05D006946 5.9e-92 341.7 293 61.4
Lsat_1_v5_gn_0_14820 Lactuca sativa HOM05D005786 ORTHO05D006946 2.2e-91 339.7 306 62.1
C02p21270 Brassica napus HOM05D005786 ORTHO05D006946 1.4e-90 337.0 277 63.2
MBI07_g02892_MAGBIO Magnolia biondii HOM05D005786 ORTHO05D006946 3.2e-90 335.9 257 67.7
EL10Ac4g10004 Beta vulgaris HOM05D005786 ORTHO05D006946 1.6e-89 333.6 297 60.9
HPP92_023718 Vanilla planifolia HOM05D005786 ORTHO05D006946 1.4e-88 330.5 301 58.5
FAN14G0011 Fragaria x ananassa HOM05D005786 ORTHO05D006946 3.9e-88 328.9 321 55.5
Sed0025282 Sechium edule HOM05D005786 ORTHO05D006946 3.9e-88 328.9 291 60.8
CsaV3_1G044270 Cucumis sativus L. HOM05D005786 ORTHO05D006946 5.1e-88 328.6 294 60.2
MELO3C010021.2 Cucumis melo HOM05D005786 ORTHO05D006946 4.4e-87 325.5 294 59.9
ATR0743G231 Amborella trichopoda HOM05D005786 ORTHO05D006946 5.7e-87 325.1 294 60.5
AUR62006638 Chenopodium quinoa HOM05D005786 ORTHO05D006946 2.8e-86 322.8 314 57.3
SalBow6G2392 Salvia bowleyana HOM05D005786 ORTHO05D006946 8.2e-86 321.2 287 59.2
CDE04G1735 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 1.4e-85 320.5 299 58.5
CDE07G0365 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 1.5e-82 310.5 291 58.1
Nitab4.5_0000248g0060 Nicotiana tabacum HOM05D005786 ORTHO05D006946 2.7e-81 306.2 287 59.6
Peaxi162Scf01053g00210 Petunia axillaris HOM05D005786 ORTHO05D006946 1.4e-80 303.9 284 61.3
Lsat_1_v5_gn_2_63981 Lactuca sativa HOM05D005786 ORTHO05D006946 1.8e-80 303.5 299 59.9
SGA_v2.0_scaffold340G49308 Striga asiatica HOM05D005786 ORTHO05D006946 3.0e-80 302.8 303 57.1
SEGI_32803 Sequoiadendron giganteum HOM05D005786 ORTHO05D006946 2.0e-79 300.1 286 55.9
CSS0048270 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 6.3e-78 295.0 244 62.3
Os11g0264600 Oryza sativa ssp. japonica HOM05D005786 ORTHO05D006946 1.5e-74 283.9 225 64.9
Zm00001eb168750 Zea mays HOM05D005786 ORTHO05D006946 1.0e-72 277.7 278 53.6
unitig_0.g385 Utricularia gibba HOM05D005786 ORTHO05D006946 3.1e-69 266.2 211 64.5
CARHR216460 Cardamine hirsuta HOM05D005786 ORTHO05D006946 9.1e-69 264.6 189 66.7
Psat3g102080 Pisum sativum HOM05D005786 ORTHO05D006946 4.4e-63 245.7 211 65.4
Actinidia03265 Actinidia chinensis HOM05D005786 ORTHO05D006946 7.0e-61 238.4 184 66.8
Solyc04g047720.4 Solanum lycopersicum HOM05D005786 ORTHO05D006946 3.5e-60 236.1 185 67.0
vmacro19569 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 2.8e-57 226.5 175 66.9
SMO203G0033 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 1.8e-56 223.8 290 46.2
Eucgr.H01412 Eucalyptus grandis HOM05D005786 ORTHO05D006946 4.0e-56 222.6 183 59.6
Mapoly0069s0067 Marchantia polymorpha HOM05D005786 ORTHO05D006946 1.5e-55 220.7 300 43.3
AagrBONN_evm.TU.Sc2ySwM_368.936 Anthoceros agrestis HOM05D005786 ORTHO05D006946 1.5e-50 204.1 286 40.6
QL01p048186 Quercus lobata HOM05D005786 ORTHO05D006946 1.5e-50 204.1 166 63.3
BcaC03g14691 Brassica carinata HOM05D005786 ORTHO05D006946 2.8e-49 199.9 210 53.8
AagrBONN_evm.TU.Sc2ySwM_117.2462 Anthoceros agrestis HOM05D005786 ORTHO05D006946 4.0e-48 196.1 263 39.2
Cpa.g.sc123.39 Carica papaya HOM05D005786 ORTHO05D006946 3.4e-47 193.0 226 50.4
Pp3c3_22280 Physcomitrium patens HOM05D005786 ORTHO05D006946 7.5e-47 191.8 279 40.1
Haze_04585 Corylus avellana HOM05D005786 ORTHO05D006946 2.0e-44 183.7 154 63.6
FAN02G1732 Fragaria x ananassa HOM05D005786 ORTHO05D006946 3.5e-44 183.0 163 57.1
SMO357G0021 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 3.3e-42 176.4 198 48.0
Haze_04584 Corylus avellana HOM05D005786 ORTHO05D006946 3.6e-41 172.9 125 72.0
CSS0025324 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 4.0e-40 169.5 143 62.9
CSS0033529 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 1.4e-37 161.0 143 58.7
Medtr3g103380 Medicago truncatula HOM05D005786 ORTHO05D006946 4.1e-29 132.9 89 70.8
Cpa.g.sc123.40 Carica papaya HOM05D005786 ORTHO05D006946 1.3e-27 127.9 106 65.1
vmacro19570 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 1.9e-26 124.0 106 66.0
ClCG03G010290 Citrullus lanatus HOM05D005786 ORTHO05D006946 3.3e-26 123.2 138 52.9
ClCG03G010310 Citrullus lanatus HOM05D005786 ORTHO05D006946 4.4e-23 112.8 123 53.7
CBR_g36458 Chara braunii HOM05D005786 ORTHO05D006946 8.4e-22 108.6 276 34.1
CARHR216470 Cardamine hirsuta HOM05D005786 ORTHO05D006946 3.2e-21 106.7 104 59.6
BcaB04g17978 Brassica carinata HOM05D005786 ORTHO05D006946 6.0e-20 102.4 108 56.5
AL2G20340 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 4.3e-18 96.3 88 63.6
Oeu040717.1 Olea europaea HOM05D005786 ORTHO05D006946 1.6e-17 94.4 99 53.5
MCO14G575 Micromonas commoda HOM05D005786 ORTHO05D006946 5.3e-16 89.4 247 30.0
Eucgr.H01411 Eucalyptus grandis HOM05D005786 ORTHO05D006946 5.8e-15 85.9 80 63.8
Ah.04g159110 Amaranthus hybridus HOM05D005786 ORTHO05D006946 1.9e-13 80.9 102 49.0
BolC2t08267H Brassica oleracea HOM05D005786 ORTHO05D006946 9.6e-10 68.6 89 44.9
PRCOL_00005036 Prasinoderma coloniale HOM05D005786 ORTHO05D006946 3.6e-09 66.6 169 28.4


User provided reference genes

Program Settings