Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G0249 Papaver somniferum HOM05D008413 ORTHO05D000401 1.3e-151 539.7 261 100.0
PSO063G5428 Papaver somniferum HOM05D008413 ORTHO05D000401 1.4e-49 200.7 87 98.9
PSO782G4524 Papaver somniferum HOM05D008413 ORTHO05D000401 1.4e-49 200.7 87 98.9
PSO063G1996 Papaver somniferum HOM05D008413 ORTHO05D000401 1.8e-49 200.3 97 91.8
PSO017G1655 Papaver somniferum HOM05D008413 ORTHO05D000401 1.1e-30 137.9 207 38.2
PSO339G5332 Papaver somniferum HOM05D008413 ORTHO05D000401 7.8e-24 115.2 159 45.3
Atru.chr1.1934 Acer truncatum HOM05D008413 ORTHO05D000401 3.3e-22 109.8 169 40.2
Atru.chr1.2141 Acer truncatum HOM05D008413 ORTHO05D000401 9.5e-22 108.2 169 39.6
SGA_v2.0_scaffold28G12014 Striga asiatica HOM05D008413 ORTHO05D000401 3.6e-21 106.3 206 34.5
Atru.chr11.187 Acer truncatum HOM05D008413 ORTHO05D000401 8.1e-21 105.1 166 39.2
SGA_v2.0_scaffold86G26910 Striga asiatica HOM05D008413 ORTHO05D000401 3.1e-20 103.2 175 37.7
PSO170G1591 Papaver somniferum HOM05D008413 ORTHO05D000401 1.3e-18 97.8 219 33.8
PSO541G5389 Papaver somniferum HOM05D008413 ORTHO05D000401 1.7e-18 97.4 219 33.8
SGA_v2.0_scaffold218G42484 Striga asiatica HOM05D008413 ORTHO05D000401 1.7e-18 97.4 167 34.1
PSO478G0274 Papaver somniferum HOM05D008413 ORTHO05D000401 2.9e-18 96.7 219 33.8
PSO384G2190 Papaver somniferum HOM05D008413 ORTHO05D000401 4.9e-18 95.9 89 51.7
PSO541G0947 Papaver somniferum HOM05D008413 ORTHO05D000401 4.9e-18 95.9 229 34.1
SGA_v2.0_scaffold119G32741 Striga asiatica HOM05D008413 ORTHO05D000401 1.1e-17 94.7 136 39.0
PSO591G0033 Papaver somniferum HOM05D008413 ORTHO05D000401 1.9e-17 94.0 83 51.8
SGA_v2.0_scaffold368G50078 Striga asiatica HOM05D008413 ORTHO05D000401 4.1e-17 92.8 136 37.5
SGA_v2.0_scaffold85G26643 Striga asiatica HOM05D008413 ORTHO05D000401 1.6e-16 90.9 132 41.7
SGA_v2.0_scaffold90G27840 Striga asiatica HOM05D008413 ORTHO05D000401 1.6e-16 90.9 136 37.5
SGA_v2.0_scaffold208G41998 Striga asiatica HOM05D008413 ORTHO05D000401 1.5e-14 84.3 128 40.6
SGA_v2.0_scaffold176G39371 Striga asiatica HOM05D008413 ORTHO05D000401 3.3e-14 83.2 240 30.0
SGA_v2.0_scaffold284G47013 Striga asiatica HOM05D008413 ORTHO05D000401 4.7e-13 79.3 119 37.0
SGA_v2.0_scaffold169G38717 Striga asiatica HOM05D008413 ORTHO05D000401 4.0e-12 76.3 146 34.9
Aqoxy5G02702 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 8.9e-12 75.1 103 34.0
Glyma.17G168800 Glycine max HOM05D001576 ORTHO05D000401 2.2e-10 70.5 101 33.7
BraA09t37707Z Brassica rapa HOM05D000589 ORTHO05D000401 4.9e-10 69.3 105 31.4
BolC5t30732H Brassica oleracea HOM05D000589 ORTHO05D005968 8.4e-10 68.6 102 35.3
Rhsim01G0041500 Rhododendron simsii HOM05D001576 ORTHO05D000401 8.4e-10 68.6 91 35.2
SGA_v2.0_scaffold231G43417 Striga asiatica HOM05D008413 ORTHO05D000401 1.9e-09 67.4 84 41.7
BolC7t41251H Brassica oleracea HOM05D000589 ORTHO05D000401 3.2e-09 66.6 102 31.4
Dinv13716 Davidia involucrata HOM05D002266 ORTHO05D010337 3.2e-09 66.6 151 29.8
Aqoxy3G02268 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 4.1e-09 66.2 110 30.9
BcaC01g01358 Brassica carinata HOM05D000589 ORTHO05D000401 4.1e-09 66.2 102 32.4
Rhsim07G0047500 Rhododendron simsii HOM05D009487 ORTHO05D011434 4.1e-09 66.2 93 34.4
AL5G28650 Arabidopsis lyrata HOM05D000589 ORTHO05D000401 5.4e-09 65.9 116 33.6
BolC9t55113H Brassica oleracea HOM05D000589 ORTHO05D000401 5.4e-09 65.9 105 32.4
Os07g0554400 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 5.4e-09 65.9 88 36.4
Aqoxy1G02949 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 7.1e-09 65.5 127 30.7
BolC1t03974H Brassica oleracea HOM05D000589 ORTHO05D000401 7.1e-09 65.5 109 33.0
SGA_v2.0_scaffold234G43617 Striga asiatica HOM05D008413 ORTHO05D000401 7.1e-09 65.5 64 50.0
FvH4_3g26413 Fragaria vesca HOM05D001576 ORTHO05D000401 9.2e-09 65.1 109 33.9
Aqoxy3G02110 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 1.2e-08 64.7 127 30.7
AL6G29040 Arabidopsis lyrata HOM05D000589 ORTHO05D000401 1.2e-08 64.7 116 32.8
Hma1.2p1_0921F.1_g236870 Hydrangea macrophylla HOM05D001576 ORTHO05D010219 1.2e-08 64.7 102 33.3
SGA_v2.0_scaffold12G05983 Striga asiatica HOM05D008413 ORTHO05D000401 1.2e-08 64.7 72 43.1
SGA_v2.0_scaffold177G39426 Striga asiatica HOM05D008413 ORTHO05D000401 1.2e-08 64.7 69 44.9
Aqoxy6G02363 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 1.6e-08 64.3 128 29.7
Hma1.2p1_1313F.1_g274940 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 2.1e-08 63.9 155 32.3
BcaC05g24983 Brassica carinata HOM05D000589 ORTHO05D000401 2.7e-08 63.5 120 30.8
Haze_17766 Corylus avellana HOM05D001576 ORTHO05D000401 2.7e-08 63.5 110 36.4
SGA_v2.0_scaffold61G21156 Striga asiatica HOM05D008413 ORTHO05D000401 2.7e-08 63.5 61 49.2
TWI34G1527 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.7e-08 63.5 118 28.8
TWI74G0837 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.7e-08 63.5 118 28.8
PSO017G6541 Papaver somniferum HOM05D008413 ORTHO05D000401 4.6e-08 62.8 57 52.6
Carub.0336s0001 Capsella rubella HOM05D000589 ORTHO05D000401 6.0e-08 62.4 97 33.0
Aqoxy3G02601 Aquilegia oxysepala HOM05D017921 ORTHO05D000401 7.8e-08 62.0 95 36.8
Aqoxy4G02835 Aquilegia oxysepala HOM05D017921 ORTHO05D000401 7.8e-08 62.0 95 36.8
AL5G33150 Arabidopsis lyrata HOM05D000589 ORTHO05D000401 7.8e-08 62.0 151 27.8
ECA240G1952 Erigeron canadensis HOM05D008130 ORTHO05D007881 7.8e-08 62.0 148 27.7
Rhsim12G0031800 Rhododendron simsii HOM05D001576 ORTHO05D000401 7.8e-08 62.0 87 34.5
AL3G20450 Arabidopsis lyrata HOM05D000589 ORTHO05D000401 1.0e-07 61.6 151 27.8
AL7G47730 Arabidopsis lyrata HOM05D000589 ORTHO05D000401 1.0e-07 61.6 151 27.8
Haze_20229 Corylus avellana HOM05D001576 ORTHO05D000401 1.0e-07 61.6 105 36.2
ECA238G4145 Erigeron canadensis HOM05D010753 ORTHO05D007881 1.0e-07 61.6 143 28.7
Hma1.2p1_1287F.1_g273260 Hydrangea macrophylla HOM05D009738 ORTHO05D011821 1.0e-07 61.6 86 39.5
QL10p048988 Quercus lobata HOM05D001576 ORTHO05D000401 1.0e-07 61.6 104 27.9
Rhsim08G0180400 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.0e-07 61.6 82 35.4
Aqoxy1G00950 Aquilegia oxysepala HOM05D017921 ORTHO05D000401 1.3e-07 61.2 95 36.8
Aqoxy4G02836 Aquilegia oxysepala HOM05D001341 ORTHO05D001181 1.3e-07 61.2 95 36.8
AL1G37690 Arabidopsis lyrata HOM05D000589 ORTHO05D000401 1.3e-07 61.2 151 27.2
BolC9t54041H Brassica oleracea HOM05D000589 ORTHO05D000401 1.3e-07 61.2 174 24.7
Rhsim03G0149900 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.3e-07 61.2 85 32.9
BolC3t20860H Brassica oleracea HOM05D000214 ORTHO05D000131 1.7e-07 60.8 105 32.4
QL03p006855 Quercus lobata HOM05D001576 ORTHO05D000401 1.7e-07 60.8 98 28.6
QL06p039590 Quercus lobata HOM05D001576 ORTHO05D000401 1.7e-07 60.8 98 28.6
BolC6t38683H Brassica oleracea HOM05D000589 ORTHO05D000401 2.3e-07 60.5 110 30.9
BolC7t44270H Brassica oleracea HOM05D000126 ORTHO05D000085 2.3e-07 60.5 105 30.5
BolC9t58301H Brassica oleracea HOM05D000589 ORTHO05D000401 2.3e-07 60.5 118 29.7
PSO210G3837 Papaver somniferum HOM05D019271 ORTHO05D013620 3.0e-07 60.1 89 31.5
PSO339G5938 Papaver somniferum HOM05D019271 ORTHO05D013620 3.0e-07 60.1 92 31.5
SGA_v2.0_scaffold167G38458 Striga asiatica HOM05D001576 ORTHO05D000401 3.0e-07 60.1 171 27.5
Aqoxy2G01003 Aquilegia oxysepala HOM05D017921 ORTHO05D000401 3.9e-07 59.7 95 35.8
PSO541G3669 Papaver somniferum HOM05D008413 ORTHO05D000401 3.9e-07 59.7 175 30.3
Rhsim04G0125600 Rhododendron simsii HOM05D001576 ORTHO05D000401 3.9e-07 59.7 139 30.9
TWI38G0149 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 3.9e-07 59.7 103 30.1
QL05p011416 Quercus lobata HOM05D001576 ORTHO05D016378 5.1e-07 59.3 127 24.4
SGA_v2.0_scaffold38G15030 Striga asiatica HOM05D008413 ORTHO05D000401 5.1e-07 59.3 179 30.2
Zm00001eb138070 Zea mays HOM05D001576 ORTHO05D000401 5.1e-07 59.3 121 30.6
Carub.0006s1187 Capsella rubella HOM05D000589 ORTHO05D000401 6.6e-07 58.9 97 32.0
CARHR190160 Cardamine hirsuta HOM05D000589 ORTHO05D000401 6.6e-07 58.9 85 35.3
CiPaw.14G121300 Carya illinoinensis HOM05D001576 ORTHO05D010219 6.6e-07 58.9 124 33.1
ECA233G4320 Erigeron canadensis HOM05D010753 ORTHO05D007881 6.6e-07 58.9 159 28.3
Hma1.2p1_0324F.1_g125640 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 6.6e-07 58.9 89 34.8
PSO675G4711 Papaver somniferum HOM05D015264 ORTHO05D013620 6.6e-07 58.9 98 30.6
Hund20099 Selenicereus undatus HOM05D000214 ORTHO05D000131 6.6e-07 58.9 143 28.0
ECA232G4230 Erigeron canadensis HOM05D006295 ORTHO05D008061 8.6e-07 58.5 99 30.3
PSO063G5666 Papaver somniferum HOM05D015264 ORTHO05D013620 8.6e-07 58.5 98 29.6
CiPaw.01G307400 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.1e-06 58.2 86 34.9
CiPaw.08G157400 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.1e-06 58.2 103 34.0
Ciclev10017471m.g Citrus clementina HOM05D001576 ORTHO05D000401 1.1e-06 58.2 87 29.9
ECA248G1052 Erigeron canadensis HOM05D006295 ORTHO05D008061 1.1e-06 58.2 99 30.3
Rhsim05G0091700 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.1e-06 58.2 135 28.1
Rhsim05G0092900 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.1e-06 58.2 135 28.1
CiPaw.03G089300 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.5e-06 57.8 114 34.2
CiPaw.14G060500 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.5e-06 57.8 103 34.0
ECA232G3669 Erigeron canadensis HOM05D007803 ORTHO05D009814 1.5e-06 57.8 102 29.4
PSO478G2128 Papaver somniferum HOM05D019271 ORTHO05D013620 1.5e-06 57.8 88 33.0
ECA233G5987 Erigeron canadensis HOM05D006295 ORTHO05D008061 1.9e-06 57.4 99 29.3
QL03p071586 Quercus lobata HOM05D001576 ORTHO05D000401 1.9e-06 57.4 104 26.9
RcHm_v2.0_Chr5g0049061 Rosa chinensis HOM05D007743 ORTHO05D010219 1.9e-06 57.4 99 27.3
Aqoxy5G03427 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 2.5e-06 57.0 115 32.2
CiPaw.11G164500 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.5e-06 57.0 92 35.9
SGA_v2.0_scaffold4G02509 Striga asiatica HOM05D008413 ORTHO05D000401 2.5e-06 57.0 161 29.2
AT3G47680 Arabidopsis thaliana HOM05D000589 ORTHO05D000401 3.3e-06 56.6 142 26.1
BolC8t52393H Brassica oleracea HOM05D000589 ORTHO05D000401 3.3e-06 56.6 105 29.5
BolC9t58424H Brassica oleracea HOM05D000589 ORTHO05D000401 3.3e-06 56.6 156 24.4
CSS0014176 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D010219 3.3e-06 56.6 116 29.3
TWI56G0559 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 3.3e-06 56.6 175 26.3
C09p61020 Brassica napus HOM05D000589 ORTHO05D000401 4.3e-06 56.2 103 29.1
BolC2t11945H Brassica oleracea HOM05D000589 ORTHO05D000401 4.3e-06 56.2 102 29.4
CiPaw.09G130900 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.3e-06 56.2 96 35.4
CiPaw.10G126200 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.3e-06 56.2 96 35.4
FvH4_6g19603 Fragaria vesca HOM05D006804 ORTHO05D009450 4.3e-06 56.2 93 26.9
PSO675G8335 Papaver somniferum HOM05D019271 ORTHO05D013620 4.3e-06 56.2 85 30.6
SGA_v2.0_scaffold323G48638 Striga asiatica HOM05D008413 ORTHO05D000401 4.3e-06 56.2 61 42.6
CSS0032344 Camellia sinensis var. sinensis HOM05D007743 ORTHO05D004645 5.6e-06 55.8 82 32.9
CiPaw.15G112900 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.6e-06 55.8 147 30.6
ECA233G0556 Erigeron canadensis HOM05D007803 ORTHO05D009814 5.6e-06 55.8 100 26.0
ECA238G3252 Erigeron canadensis HOM05D007803 ORTHO05D009814 5.6e-06 55.8 100 26.0
ECA238G3743 Erigeron canadensis HOM05D007803 ORTHO05D009814 5.6e-06 55.8 100 26.0
ECA240G2336 Erigeron canadensis HOM05D007803 ORTHO05D009814 5.6e-06 55.8 118 25.4
ECA248G2644 Erigeron canadensis HOM05D007803 ORTHO05D009814 5.6e-06 55.8 104 26.0
PSO675G2536 Papaver somniferum HOM05D019271 ORTHO05D013620 5.6e-06 55.8 88 31.8
SGA_v2.0_scaffold309G48177 Striga asiatica HOM05D001576 ORTHO05D000401 5.6e-06 55.8 136 27.2
TWI12G0266 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 5.6e-06 55.8 93 33.3
AL6G48680 Arabidopsis lyrata HOM05D000936 ORTHO05D000401 7.3e-06 55.5 163 26.4
CiPaw.05G126800 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.3e-06 55.5 114 34.2
ECA240G1405 Erigeron canadensis HOM05D007803 ORTHO05D009814 7.3e-06 55.5 100 26.0
ECA246G2896 Erigeron canadensis HOM05D007803 ORTHO05D009814 7.3e-06 55.5 100 26.0
FAN05G4247 Fragaria x ananassa HOM05D006804 ORTHO05D009450 7.3e-06 55.5 93 26.9
FAN19G0556 Fragaria x ananassa HOM05D006804 ORTHO05D009450 7.3e-06 55.5 87 25.3
FAN23G2251 Fragaria x ananassa HOM05D006804 ORTHO05D009450 7.3e-06 55.5 93 26.9
QL02p093127 Quercus lobata HOM05D001576 ORTHO05D000401 7.3e-06 55.5 134 29.1
Rhsim07G0066400 Rhododendron simsii HOM05D001576 ORTHO05D000401 7.3e-06 55.5 101 27.7
RhsimUnG0111600 Rhododendron simsii HOM05D001576 ORTHO05D000401 7.3e-06 55.5 101 27.7
Hund19562 Selenicereus undatus HOM05D001576 ORTHO05D000401 7.3e-06 55.5 118 28.8
Zm00001eb244750 Zea mays HOM05D009951 ORTHO05D012391 7.3e-06 55.5 94 29.8
Zm00001eb334530 Zea mays HOM05D009951 ORTHO05D012391 7.3e-06 55.5 94 29.8
Zm00001eb350880 Zea mays HOM05D009951 ORTHO05D012391 7.3e-06 55.5 94 29.8
CSS0013406 Camellia sinensis var. sinensis HOM05D007743 ORTHO05D004645 9.6e-06 55.1 82 34.1
CiPaw.04G121900 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.6e-06 55.1 112 33.9
ECA233G2202 Erigeron canadensis HOM05D007803 ORTHO05D009814 9.6e-06 55.1 100 25.0
ECA236G1155 Erigeron canadensis HOM05D007803 ORTHO05D009814 9.6e-06 55.1 100 26.0
PSO339G0554 Papaver somniferum HOM05D019271 ORTHO05D013620 9.6e-06 55.1 88 30.7
Rhsim08G0115200 Rhododendron simsii HOM05D007743 ORTHO05D004645 9.6e-06 55.1 89 31.5


User provided reference genes

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