Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G0234 Papaver somniferum HOM05D001960 ORTHO05D007725 9.4e-273 943.0 488 100.0
PSO591G0496 Papaver somniferum HOM05D001960 ORTHO05D007725 2.0e-230 802.4 493 87.0
TAR371G1229 Trochodendron aralioides HOM05D001960 ORTHO05D007725 1.3e-213 746.5 446 80.7
Nn3g17123 Nelumbo nucifera HOM05D001960 ORTHO05D007725 2.3e-210 735.7 478 75.1
CiPaw.03G030400 Carya illinoinensis HOM05D001960 ORTHO05D007725 1.1e-207 726.9 443 78.3
CSS0036057 Camellia sinensis var. sinensis HOM05D001960 ORTHO05D007725 2.4e-207 725.7 490 73.9
GSVIVG01032604001 Vitis vinifera HOM05D001960 ORTHO05D007725 2.0e-206 722.6 494 75.3
Gohir.D04G050500 Gossypium hirsutum HOM05D001960 ORTHO05D007725 3.4e-206 721.8 494 72.9
Actinidia06068 Actinidia chinensis HOM05D001960 ORTHO05D007725 7.6e-206 720.7 426 81.5
Gorai.012G056000 Gossypium raimondii HOM05D001960 ORTHO05D007725 7.6e-206 720.7 494 72.9
QL02p080348 Quercus lobata HOM05D001960 ORTHO05D007725 7.6e-206 720.7 448 77.7
Thecc.04G074100 Theobroma cacao HOM05D001960 ORTHO05D007725 6.4e-205 717.6 444 77.0
Eucgr.J02136 Eucalyptus grandis HOM05D001960 ORTHO05D007725 2.4e-204 715.7 427 79.4
CANSAT64G2224 Cannabis sativa HOM05D001960 ORTHO05D007725 4.2e-204 714.9 443 77.7
Prupe.3G272300 Prunus persica HOM05D001960 ORTHO05D007725 1.6e-203 713.0 491 71.5
THA.LOC104823928 Tarenaya hassleriana HOM05D001960 ORTHO05D007725 1.6e-203 713.0 489 73.0
Cfa007507 Carpinus fangiana HOM05D001960 ORTHO05D007725 2.1e-203 712.6 436 78.7
Nitab4.5_0000564g0320 Nicotiana tabacum HOM05D001960 ORTHO05D007725 2.1e-203 712.6 469 74.0
Manes.17G020800 Manihot esculenta HOM05D001960 ORTHO05D007725 2.7e-203 712.2 499 71.5
RhsimUnG0055000 Rhododendron simsii HOM05D001960 ORTHO05D007725 4.6e-203 711.4 443 77.9
TWI34G1416 Tripterygium wilfordii HOM05D001960 ORTHO05D007725 4.6e-203 711.4 451 75.6
Atru.chr8.1915 Acer truncatum HOM05D001960 ORTHO05D007725 6.0e-203 711.1 493 71.8
Os01g0588800 Oryza sativa ssp. japonica HOM05D001960 ORTHO05D007725 7.8e-203 710.7 423 80.6
arahy.Tifrunner.gnm1.ann1.9ZMQ3R Arachis hypogaea HOM05D001960 ORTHO05D007725 3.0e-202 708.8 443 76.5
FvH4_6g49351 Fragaria vesca HOM05D001960 ORTHO05D007725 3.0e-202 708.8 425 79.8
Sabra17G0069200 Salix brachista HOM05D001960 ORTHO05D007725 3.9e-202 708.4 422 79.6
Cc01_g00810 Coffea canephora HOM05D001960 ORTHO05D007725 6.6e-202 707.6 442 76.9
RcHm_v2.0_Chr2g0169211 Rosa chinensis HOM05D001960 ORTHO05D007725 8.7e-202 707.2 443 77.2
Solyc02g087640.3 Solanum lycopersicum HOM05D001960 ORTHO05D007725 8.7e-202 707.2 456 74.6
MSTRG.15488 Avicennia marina HOM05D001960 ORTHO05D007725 1.1e-201 706.8 467 76.0
Carub.0005s0723 Capsella rubella HOM05D001960 ORTHO05D007725 1.1e-201 706.8 437 76.0
MD09G1045900 Malus domestica HOM05D001960 ORTHO05D007725 1.1e-201 706.8 431 77.5
Sopen02g032390 Solanum pennellii HOM05D001960 ORTHO05D007725 1.5e-201 706.4 469 72.9
Thhalv10004119m.g Eutrema salsugineum HOM05D001960 ORTHO05D007725 1.9e-201 706.1 492 71.1
Hma1.2p1_1232F.1_g268880 Hydrangea macrophylla HOM05D001960 ORTHO05D007725 1.9e-201 706.1 429 78.1
CsaV3_5G037870 Cucumis sativus L. HOM05D001960 ORTHO05D007725 2.5e-201 705.7 420 79.3
Nitab4.5_0002265g0270 Nicotiana tabacum HOM05D001960 ORTHO05D007725 2.5e-201 705.7 469 73.6
AL5G18340 Arabidopsis lyrata HOM05D001960 ORTHO05D007725 3.3e-201 705.3 491 71.1
AT3G28700 Arabidopsis thaliana HOM05D001960 ORTHO05D007725 3.3e-201 705.3 437 76.2
arahy.Tifrunner.gnm1.ann1.57V2RC Arachis hypogaea HOM05D001960 ORTHO05D007725 5.6e-201 704.5 499 70.5
CARHR286600 Cardamine hirsuta HOM05D001960 ORTHO05D007725 7.3e-201 704.1 490 71.0
FAN05G4054 Fragaria x ananassa HOM05D001960 ORTHO05D007725 7.3e-201 704.1 431 78.9
MD17G1046800 Malus domestica HOM05D001960 ORTHO05D007725 1.3e-200 703.4 442 75.3
MELO3C021973.2 Cucumis melo HOM05D001960 ORTHO05D007725 1.6e-200 703.0 420 78.6
DCAR_006720 Daucus carota HOM05D001960 ORTHO05D007725 2.1e-200 702.6 464 73.3
Medtr4g075200 Medicago truncatula HOM05D001960 ORTHO05D007725 2.8e-200 702.2 425 78.8
Psat7g177520 Pisum sativum HOM05D001960 ORTHO05D007725 2.8e-200 702.2 424 78.5
Lsat_1_v5_gn_4_179920 Lactuca sativa HOM05D001960 ORTHO05D007725 3.6e-200 701.8 441 76.2
PGSC0003DMG400001411 Solanum tuberosum HOM05D001960 ORTHO05D007725 3.6e-200 701.8 456 74.3
BcaC06g33634 Brassica carinata HOM05D001960 ORTHO05D007725 4.8e-200 701.4 490 70.0
C07p37650 Brassica napus HOM05D001960 ORTHO05D004348 6.2e-200 701.0 489 70.1
BolC7t44281H Brassica oleracea HOM05D001960 ORTHO05D007725 6.2e-200 701.0 489 70.1
Lj3g0011182 Lotus japonicus HOM05D001960 ORTHO05D007725 8.1e-200 700.7 426 77.7
TPR.G17186 Trifolium pratense HOM05D001960 ORTHO05D007725 1.4e-199 699.9 425 78.6
Potri.017G077000 Populus trichocarpa HOM05D001960 ORTHO05D007725 2.4e-199 699.1 442 75.8
HanXRQChr09g0265611 Helianthus annuus HOM05D001960 ORTHO05D007725 4.0e-199 698.4 423 77.3
SGA_v2.0_scaffold30G12523 Striga asiatica HOM05D001960 ORTHO05D007725 6.9e-199 697.6 442 75.8
Haze_14586 Corylus avellana HOM05D001960 ORTHO05D007725 1.2e-198 696.8 473 72.3
A06p40400 Brassica napus HOM05D001960 ORTHO05D004348 1.5e-198 696.4 489 69.9
BraA06t26958Z Brassica rapa HOM05D001960 ORTHO05D004348 1.5e-198 696.4 489 69.9
BcaC06g30901 Brassica carinata HOM05D001960 ORTHO05D007725 2.6e-198 695.7 496 69.4
Aqoxy3G03264 Aquilegia oxysepala HOM05D001960 ORTHO05D007725 3.4e-198 695.3 401 82.3
Phvul.011G027550 Phaseolus vulgaris HOM05D001960 ORTHO05D007725 7.6e-198 694.1 423 77.5
Sp2g17340 Schrenkiella parvula HOM05D001960 ORTHO05D007725 9.9e-198 693.7 492 69.9
MBI15_g37231_MAGBIO Magnolia biondii HOM05D001960 ORTHO05D007725 1.3e-197 693.3 408 81.6
Ciclev10011611m.g Citrus clementina HOM05D001960 ORTHO05D007725 3.8e-197 691.8 493 68.8
PGR083G0481 Punica granatum HOM05D001960 ORTHO05D007725 3.8e-197 691.8 442 75.3
Migut.K01335 Erythranthe guttata HOM05D001960 ORTHO05D007725 1.9e-196 689.5 465 72.0
CAN.G206.108 Capsicum annuum HOM05D001960 ORTHO05D007725 2.4e-196 689.1 494 68.8
Glyma.11G099200 Glycine max HOM05D001960 ORTHO05D007725 2.4e-196 689.1 442 75.6
Lalb_Chr19g0139461 Lupinus albus HOM05D001960 ORTHO05D007725 3.2e-196 688.7 424 76.4
AUR62031644 Chenopodium quinoa HOM05D001960 ORTHO05D007725 5.4e-196 688.0 423 77.3
SalBow1G8169 Salvia bowleyana HOM05D001960 ORTHO05D007725 9.3e-196 687.2 478 70.1
Hund13245 Selenicereus undatus HOM05D001960 ORTHO05D007725 1.2e-195 686.8 469 72.5
VMungo1127G2029 Vigna mungo HOM05D001960 ORTHO05D007725 1.2e-195 686.8 440 74.8
Sed0013706 Sechium edule HOM05D001960 ORTHO05D007725 2.1e-195 686.0 440 74.8
FAN14G4702 Fragaria x ananassa HOM05D001960 ORTHO05D007725 6.0e-195 684.5 403 80.4
Sc10g0003830 Simmondsia chinensis HOM05D001960 ORTHO05D007725 7.9e-195 684.1 419 78.0
ClCG09G018410 Citrullus lanatus HOM05D001960 ORTHO05D007725 1.7e-194 682.9 447 74.0
Aa31LG2G4510 Aethionema arabicum HOM05D001960 ORTHO05D007725 5.1e-194 681.4 429 76.0
EL10Ac2g03435 Beta vulgaris HOM05D001960 ORTHO05D007725 4.3e-193 678.3 429 76.7
Sed0024340 Sechium edule HOM05D001960 ORTHO05D007725 4.3e-193 678.3 425 76.0
AUR62038879 Chenopodium quinoa HOM05D001960 ORTHO05D007725 9.6e-193 677.2 436 74.8
Ca_20945_v3 Cicer arietinum L. HOM05D001960 ORTHO05D007725 9.6e-193 677.2 425 77.4
Oeu060916.1 Olea europaea HOM05D001960 ORTHO05D007725 9.6e-193 677.2 496 68.1
Ca_19010_v3 Cicer arietinum L. HOM05D001960 ORTHO05D007725 1.3e-192 676.8 421 77.4
Lj7A401T79 Lonicera japonica HOM05D001960 ORTHO05D007725 5.3e-191 671.4 444 73.6
Oeu033340.1 Olea europaea HOM05D001960 ORTHO05D007725 5.5e-188 661.4 423 74.5
ATR1120G150 Amborella trichopoda HOM05D001960 ORTHO05D007725 4.6e-187 658.3 497 67.0
HPP92_022934 Vanilla planifolia HOM05D001960 ORTHO05D007725 1.1e-185 653.7 453 69.5
FAN02G2179 Fragaria x ananassa HOM05D001960 ORTHO05D007725 8.1e-184 647.5 483 67.5
Zm00001eb357440 Zea mays HOM05D001960 ORTHO05D007725 5.3e-183 644.8 422 73.0
CSS0006137 Camellia sinensis var. sinensis HOM05D001960 ORTHO05D007725 5.8e-182 641.3 374 81.3
Gohir.A05G364200 Gossypium hirsutum HOM05D001960 ORTHO05D007725 2.5e-180 636.0 405 74.8
vmacro05739 Vaccinium macrocarpon HOM05D001960 ORTHO05D007725 7.1e-180 634.4 456 71.1
HPP92_022922 Vanilla planifolia HOM05D001960 ORTHO05D007725 7.4e-177 624.4 410 72.4
ECA232G3528 Erigeron canadensis HOM05D001960 ORTHO05D007725 2.0e-174 616.3 374 77.3
C09p03940 Brassica napus HOM05D001960 ORTHO05D007725 1.6e-171 606.7 417 69.3
SEGI_03019 Sequoiadendron giganteum HOM05D001960 ORTHO05D007725 8.7e-170 600.9 440 63.6
COL.COLO4_25201 Corchorus olitorius HOM05D001960 ORTHO05D007725 2.0e-166 589.7 497 64.2
BolC9t53325H Brassica oleracea HOM05D001960 ORTHO05D007725 1.3e-165 587.0 481 62.8
Ah.12g065370 Amaranthus hybridus HOM05D001960 ORTHO05D007725 5.0e-165 585.1 393 71.0
ECA232G0063 Erigeron canadensis HOM05D001960 ORTHO05D007725 7.4e-161 571.2 374 73.3
Peaxi162Scf00129g00533 Petunia axillaris HOM05D001960 ORTHO05D007725 6.9e-159 564.7 390 69.7
BcaC04g23865 Brassica carinata HOM05D001960 ORTHO05D004348 1.5e-158 563.5 399 69.2
Dinv33716 Davidia involucrata HOM05D001960 ORTHO05D007725 1.5e-158 563.5 340 77.6
CDE05G2812 Ceratophyllum demersum HOM05D001960 ORTHO05D007725 1.4e-156 557.0 374 73.8
Pp3c8_16780 Physcomitrium patens HOM05D001960 ORTHO05D007725 3.2e-156 555.8 442 59.0
unitig_747.g21836 Utricularia gibba HOM05D001960 ORTHO05D007725 1.4e-154 550.4 410 64.6
Mapoly0027s0012 Marchantia polymorpha HOM05D001960 ORTHO05D007725 6.1e-147 525.0 450 58.0
AagrBONN_evm.TU.Sc2ySwM_368.2217 Anthoceros agrestis HOM05D001960 ORTHO05D007725 1.0e-138 497.7 460 53.5
Dinv34989 Davidia involucrata HOM05D001960 ORTHO05D007725 1.2e-137 494.2 326 73.6
Hma1.2p1_1232F.1_g268890 Hydrangea macrophylla HOM05D001960 ORTHO05D007725 3.7e-120 436.0 256 78.9
C04p40510 Brassica napus HOM05D001960 ORTHO05D007725 4.1e-119 432.6 293 70.6
BolC4t25631H Brassica oleracea HOM05D001960 ORTHO05D007725 4.1e-119 432.6 293 70.6
SMO200G0063 Selaginella moellendorffii HOM05D001960 ORTHO05D007725 5.4e-111 405.6 391 52.7
C05p44890 Brassica napus HOM05D001960 ORTHO05D007725 2.5e-108 396.7 296 65.2
C08p31240 Brassica napus HOM05D001960 ORTHO05D007725 7.5e-105 385.2 281 66.5
Ca_19017_v3 Cicer arietinum L. HOM05D000077 ORTHO05D002511 4.9e-104 382.5 344 58.4
BcaC02g09250 Brassica carinata HOM05D001960 ORTHO05D007725 1.6e-102 377.5 260 70.4
BolC8t50105H Brassica oleracea HOM05D001960 ORTHO05D007725 2.1e-102 377.1 266 69.5
C08p24890 Brassica napus HOM05D001960 ORTHO05D007725 1.9e-100 370.5 290 64.5
MCO09G443 Micromonas commoda HOM05D001960 ORTHO05D007725 1.2e-86 324.7 385 44.9
HPP92_022944 Vanilla planifolia HOM05D001960 ORTHO05D007725 9.6e-84 315.1 208 71.6
CBR_g40650 Chara braunii HOM05D001960 ORTHO05D007725 1.6e-78 297.7 333 45.6
Migut.K01334 Erythranthe guttata HOM05D001960 ORTHO05D007725 6.0e-70 269.2 199 68.8
Cre02.g096400 Chlamydomonas reinhardtii HOM05D001960 ORTHO05D007725 1.9e-68 264.2 566 31.6
SHI22231 Sapria himalayana HOM05D001960 ORTHO05D007725 4.0e-66 256.5 249 53.8
Cfa026330 Carpinus fangiana HOM05D001960 ORTHO05D007725 1.3e-48 198.4 506 30.8
Dinv34987 Davidia involucrata HOM05D001960 ORTHO05D007725 1.4e-45 188.3 110 80.0
Hma1.2p1_1232F.1_g268870 Hydrangea macrophylla HOM05D001960 ORTHO05D014729 1.6e-38 164.9 105 76.2
Actinidia23575 Actinidia chinensis HOM05D001960 ORTHO05D007725 6.3e-35 152.9 112 67.0
Dinv06509 Davidia involucrata HOM05D001960 ORTHO05D014729 8.5e-32 142.5 94 76.6
AUR62031616 Chenopodium quinoa HOM05D000372 ORTHO05D002769 1.9e-31 141.4 106 61.3
A05p31150 Brassica napus HOM05D001960 ORTHO05D033473 1.6e-22 111.7 74 74.3
CDE05G0334 Ceratophyllum demersum HOM05D000115 ORTHO05D000645 1.3e-19 102.1 60 73.3
A01p26160 Brassica napus HOM05D001960 ORTHO05D014930 4.1e-18 97.1 65 67.7
BraA02t06070Z Brassica rapa HOM05D001960 ORTHO05D014930 4.1e-18 97.1 65 67.7
HPP92_017638 Vanilla planifolia HOM05D003031 ORTHO05D003371 2.0e-17 94.7 53 75.5
BraA05t21956Z Brassica rapa HOM05D001960 ORTHO05D042754 2.7e-17 94.4 102 50.0
C04p14730 Brassica napus HOM05D001960 ORTHO05D014930 1.0e-16 92.4 65 64.6
BcaC02g11495 Brassica carinata HOM05D001960 ORTHO05D014930 1.3e-16 92.0 64 65.6
BolC3t20150H Brassica oleracea HOM05D001960 ORTHO05D014930 1.3e-16 92.0 65 64.6
A05p31140 Brassica napus HOM05D001960 ORTHO05D042754 1.7e-16 91.7 65 66.2
C07p16020 Brassica napus HOM05D001960 ORTHO05D014930 5.0e-16 90.1 66 62.1
BolC5t33816H Brassica oleracea HOM05D001960 ORTHO05D014930 8.6e-16 89.4 65 61.5
BcaC05g28941 Brassica carinata HOM05D001960 ORTHO05D014930 1.1e-15 89.0 64 62.5
C07p16060 Brassica napus HOM05D001960 ORTHO05D021151 1.5e-15 88.6 65 61.5
HPP92_003669 Vanilla planifolia HOM05D001960 ORTHO05D007725 1.6e-14 85.1 69 62.3
Medtr5g075800 Medicago truncatula HOM05D001960 ORTHO05D258834 3.7e-11 73.9 85 49.4
Actinidia27488 Actinidia chinensis HOM05D001960 ORTHO05D058277 5.9e-09 66.6 37 83.8
Dinv25076 Davidia involucrata HOM05D001960 ORTHO05D033473 2.3e-08 64.7 41 75.6


User provided reference genes

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