Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G0198 Papaver somniferum HOM05D007009 ORTHO05D008451 2.7e-115 418.7 214 100.0
PSO591G0441 Papaver somniferum HOM05D007009 ORTHO05D008451 1.6e-107 392.9 214 93.5
Cfa009076 Carpinus fangiana HOM05D007009 ORTHO05D008451 3.4e-57 225.7 214 57.9
TAR374G0768 Trochodendron aralioides HOM05D007009 ORTHO05D008451 1.4e-55 220.3 220 55.9
Nn4g22971 Nelumbo nucifera HOM05D007009 ORTHO05D008451 1.2e-54 217.2 180 61.7
Atru.chr11.1917 Acer truncatum HOM05D007009 ORTHO05D008451 4.5e-54 215.3 200 57.0
Prupe.1G262900 Prunus persica HOM05D007009 ORTHO05D008451 2.9e-53 212.6 207 55.6
Actinidia08196 Actinidia chinensis HOM05D007009 ORTHO05D008451 1.6e-51 206.8 210 52.4
Nitab4.5_0001030g0090 Nicotiana tabacum HOM05D007009 ORTHO05D008451 1.6e-51 206.8 218 51.8
Dinv24931 Davidia involucrata HOM05D000094 ORTHO05D002904 1.4e-50 203.8 177 59.3
TWI18G0515 Tripterygium wilfordii HOM05D007009 ORTHO05D008451 1.4e-50 203.8 212 52.8
Cc11_g13910 Coffea canephora HOM05D007009 ORTHO05D008451 1.8e-50 203.4 178 59.0
GSVIVG01020129001 Vitis vinifera HOM05D007009 ORTHO05D008451 1.8e-50 203.4 177 57.1
Nitab4.5_0008607g0010 Nicotiana tabacum HOM05D007009 ORTHO05D008451 5.2e-50 201.8 218 50.5
Ciclev10032750m.g Citrus clementina HOM05D007009 ORTHO05D008451 8.8e-50 201.1 213 54.0
Dinv31143 Davidia involucrata HOM05D007009 ORTHO05D008451 1.2e-49 200.7 177 58.8
Medtr5g037120 Medicago truncatula HOM05D007009 ORTHO05D008451 3.4e-49 199.1 211 52.1
CSS0013437 Camellia sinensis var. sinensis HOM05D007009 ORTHO05D008451 4.4e-49 198.7 210 50.5
Aqoxy3G03177 Aquilegia oxysepala HOM05D007009 ORTHO05D008451 1.3e-48 197.2 209 52.6
Glyma.02G026000 Glycine max HOM05D007009 ORTHO05D008451 2.2e-48 196.4 217 53.5
CsaV3_5G032050 Cucumis sativus L. HOM05D007009 ORTHO05D008451 2.8e-48 196.1 207 54.6
COL.COLO4_36263 Corchorus olitorius HOM05D007009 ORTHO05D008451 3.7e-48 195.7 210 51.0
Hund25306 Selenicereus undatus HOM05D007009 ORTHO05D008451 1.1e-47 194.1 211 49.3
PGR102G0074 Punica granatum HOM05D007009 ORTHO05D008451 1.8e-47 193.4 211 51.7
PGSC0003DMG401022631 Solanum tuberosum HOM05D007009 ORTHO05D008451 1.8e-47 193.4 222 48.2
QL03p067658 Quercus lobata HOM05D007009 ORTHO05D008451 2.4e-47 193.0 215 50.7
CANSAT01G1662 Cannabis sativa HOM05D007009 ORTHO05D008451 4.1e-47 192.2 205 52.7
ClCG05G024860 Citrullus lanatus HOM05D007009 ORTHO05D008451 2.0e-46 189.9 208 53.8
Manes.01G193800 Manihot esculenta HOM05D007009 ORTHO05D008451 3.5e-46 189.1 208 51.0
CiPaw.06G077800 Carya illinoinensis HOM05D007009 ORTHO05D008451 4.5e-46 188.7 216 51.4
Thecc.02G237500 Theobroma cacao HOM05D007009 ORTHO05D008451 5.9e-46 188.3 177 55.4
Gohir.A05G320100 Gossypium hirsutum HOM05D007009 ORTHO05D008451 7.7e-46 188.0 210 49.5
Solyc05g006580.3 Solanum lycopersicum HOM05D007009 ORTHO05D008451 7.7e-46 188.0 217 47.9
Sopen05g002530 Solanum pennellii HOM05D007009 ORTHO05D008451 7.7e-46 188.0 217 48.4
Eucgr.B03385 Eucalyptus grandis HOM05D007009 ORTHO05D008451 2.3e-45 186.4 213 50.2
Peaxi162Scf00828g00312 Petunia axillaris HOM05D007009 ORTHO05D008451 2.9e-45 186.0 211 50.7
Sed0027578 Sechium edule HOM05D007009 ORTHO05D008451 3.8e-45 185.7 179 55.3
Glyma.01G038700 Glycine max HOM05D007009 ORTHO05D008451 5.0e-45 185.3 176 55.1
Gohir.D05G322400 Gossypium hirsutum HOM05D007009 ORTHO05D008451 1.5e-44 183.7 210 48.1
Duzib251G0800 Durio zibethinus HOM05D007009 ORTHO05D008451 1.9e-44 183.3 208 49.5
Gorai.009G346000 Gossypium raimondii HOM05D007009 ORTHO05D008451 3.3e-44 182.6 210 48.1
SalBow2G0075 Salvia bowleyana HOM05D007009 ORTHO05D008451 3.3e-44 182.6 201 51.2
Lalb_Chr05g0217381 Lupinus albus HOM05D007009 ORTHO05D008451 4.3e-44 182.2 210 48.1
arahy.Tifrunner.gnm1.ann1.8B6YVA Arachis hypogaea HOM05D007009 ORTHO05D008451 7.3e-44 181.4 223 48.0
CAN.G27.64 Capsicum annuum HOM05D007009 ORTHO05D008451 7.3e-44 181.4 207 48.3
Hma1.2p1_0265F.1_g106360 Hydrangea macrophylla HOM05D007009 ORTHO05D008451 9.5e-44 181.0 217 49.3
FAN07G0981 Fragaria x ananassa HOM05D007009 ORTHO05D008451 1.2e-43 180.6 188 53.2
FAN17G0686 Fragaria x ananassa HOM05D007009 ORTHO05D008451 2.1e-43 179.9 202 50.0
FAN22G1672 Fragaria x ananassa HOM05D007009 ORTHO05D008451 2.1e-43 179.9 188 53.2
Ah.03g132140 Amaranthus hybridus HOM05D007009 ORTHO05D008451 6.1e-43 178.3 176 53.4
arahy.Tifrunner.gnm1.ann1.IMS4B0 Arachis hypogaea HOM05D007009 ORTHO05D008451 6.1e-43 178.3 223 48.4
FvH4_4g35380 Fragaria vesca HOM05D007009 ORTHO05D008451 6.1e-43 178.3 210 49.5
FAN12G0678 Fragaria x ananassa HOM05D007009 ORTHO05D008451 6.1e-43 178.3 210 49.5
TPR.G26720 Trifolium pratense HOM05D007009 ORTHO05D008451 1.0e-42 177.6 178 52.8
Haze_12109 Corylus avellana HOM05D007009 ORTHO05D008451 4.0e-42 175.6 194 53.1
CiPaw.05G143700 Carya illinoinensis HOM05D007009 ORTHO05D008451 5.2e-42 175.3 217 48.8
RcHm_v2.0_Chr4g0444991 Rosa chinensis HOM05D007009 ORTHO05D008451 5.2e-42 175.3 180 51.7
Migut.L01370 Erythranthe guttata HOM05D007009 ORTHO05D008451 1.5e-41 173.7 191 50.8
Sc11g0001470 Simmondsia chinensis HOM05D007009 ORTHO05D008451 2.0e-41 173.3 212 47.6
Lj2g0006218 Lotus japonicus HOM05D007009 ORTHO05D008451 2.6e-41 172.9 223 48.0
AUR62026539 Chenopodium quinoa HOM05D007009 ORTHO05D008451 3.4e-41 172.6 217 47.5
C06p43850 Brassica napus HOM05D007009 ORTHO05D008451 3.7e-40 169.1 186 51.1
Sp5g25090 Schrenkiella parvula HOM05D007009 ORTHO05D008451 4.9e-40 168.7 185 51.9
Potri.010G039466 Populus trichocarpa HOM05D007009 ORTHO05D008451 8.3e-40 167.9 200 51.0
MSTRG.7846 Avicennia marina HOM05D007009 ORTHO05D008451 1.8e-39 166.8 210 46.2
Potri.008G191700 Populus trichocarpa HOM05D007009 ORTHO05D008451 1.8e-39 166.8 207 46.4
MD16G1083100 Malus domestica HOM05D007009 ORTHO05D008451 2.4e-39 166.4 209 47.4
Aa31LG4G10880 Aethionema arabicum HOM05D007009 ORTHO05D008451 1.6e-38 163.7 183 49.7
Thhalv10019139m.g Eutrema salsugineum HOM05D007009 ORTHO05D008451 2.7e-38 162.9 208 45.7
BolC6t39457H Brassica oleracea HOM05D007009 ORTHO05D008451 4.6e-38 162.2 218 45.9
THA.LOC104808792 Tarenaya hassleriana HOM05D007009 ORTHO05D008451 2.3e-37 159.8 212 45.8
Ca_15204_v3 Cicer arietinum L. HOM05D007009 ORTHO05D008451 3.9e-37 159.1 161 55.9
Carub.0002s1666 Capsella rubella HOM05D007009 ORTHO05D008451 8.6e-37 157.9 215 45.1
BcaC08g46448 Brassica carinata HOM05D007009 ORTHO05D008451 4.3e-36 155.6 198 45.5
MELO3C012041.2 Cucumis melo HOM05D007009 ORTHO05D008451 9.5e-36 154.5 175 52.6
Duzib268G1291 Durio zibethinus HOM05D007009 ORTHO05D008451 1.2e-35 154.1 171 51.5
VMungo1215G0662 Vigna mungo HOM05D007009 ORTHO05D008451 8.0e-35 151.4 178 51.1
Sabra10G0027300 Salix brachista HOM05D007009 ORTHO05D008451 1.8e-34 150.2 262 40.8
CARHR063080 Cardamine hirsuta HOM05D007009 ORTHO05D008451 3.1e-34 149.4 214 43.9
HanXRQChr08g0209091 Helianthus annuus HOM05D007009 ORTHO05D008451 4.0e-34 149.1 182 47.3
AT1G69980 Arabidopsis thaliana HOM05D007009 ORTHO05D008451 2.6e-33 146.4 185 47.0
Rhsim12G0053000 Rhododendron simsii HOM05D007009 ORTHO05D008451 2.6e-33 146.4 189 46.0
BcaB03g14776 Brassica carinata HOM05D007009 ORTHO05D008451 7.5e-33 144.8 197 44.7
Lj6A798T55 Lonicera japonica HOM05D007009 ORTHO05D008451 7.5e-33 144.8 188 45.2
Psat2g116400 Pisum sativum HOM05D007009 ORTHO05D008451 7.5e-33 144.8 179 48.0
AL2G29220 Arabidopsis lyrata HOM05D007009 ORTHO05D008451 1.7e-32 143.7 183 47.5
Os09g0560400 Oryza sativa ssp. japonica HOM05D007009 ORTHO05D008451 8.3e-32 141.4 171 44.4
Zm00001eb104690 Zea mays HOM05D007009 ORTHO05D008451 8.3e-32 141.4 185 43.8
vmacro01210 Vaccinium macrocarpon HOM05D007009 ORTHO05D008451 1.4e-31 140.6 286 35.3
EL10Ac6g13085 Beta vulgaris HOM05D007009 ORTHO05D008451 4.1e-31 139.0 162 48.1
Cpa.g.sc5.312 Carica papaya HOM05D007009 ORTHO05D008451 3.5e-30 136.0 141 53.9
DCAR_026574 Daucus carota HOM05D007009 ORTHO05D008451 1.3e-29 134.0 171 44.4
unitig_8.g2944 Utricularia gibba HOM05D007009 ORTHO05D008451 1.3e-29 134.0 177 44.6
SGA_v2.0_scaffold166G38305 Striga asiatica HOM05D007009 ORTHO05D008451 6.6e-29 131.7 175 45.1
Lsat_1_v5_gn_8_161781 Lactuca sativa HOM05D007009 ORTHO05D008451 2.5e-28 129.8 172 40.1
A07p36430 Brassica napus HOM05D007009 ORTHO05D008451 4.3e-28 129.0 175 45.1
ECA233G5592 Erigeron canadensis HOM05D007009 ORTHO05D008451 5.6e-28 128.6 187 43.3
Phvul.002G078700 Phaseolus vulgaris HOM05D007009 ORTHO05D008451 4.0e-26 122.5 215 37.7
AUR62039445 Chenopodium quinoa HOM05D007009 ORTHO05D008451 1.7e-24 117.1 142 47.2
BcaB03g14779 Brassica carinata HOM05D007009 ORTHO05D008451 8.3e-24 114.8 211 40.3
CDE10G1217 Ceratophyllum demersum HOM05D007009 ORTHO05D008451 1.9e-23 113.6 147 44.9
Mapoly0049s0134 Marchantia polymorpha HOM05D007009 ORTHO05D008451 1.0e-21 107.8 163 38.0
MBI15_g31419_MAGBIO Magnolia biondii HOM05D007009 ORTHO05D008451 1.2e-19 100.9 104 55.8
Pp3c4_16120 Physcomitrium patens HOM05D007009 ORTHO05D008451 1.2e-14 84.3 172 33.1
C03p84900 Brassica napus HOM05D000455 ORTHO05D008451 1.4e-10 70.9 116 41.4
BolC3t20782H Brassica oleracea HOM05D000455 ORTHO05D008451 1.4e-10 70.9 116 41.4
BolC8t48483H Brassica oleracea HOM05D007009 ORTHO05D008451 6.9e-10 68.6 134 37.3
CSS0007469 Camellia sinensis var. sinensis HOM05D007009 ORTHO05D008451 1.9e-07 60.5 69 42.0
SEGI_38065 Sequoiadendron giganteum HOM05D007009 ORTHO05D008451 2.7e-06 56.6 124 33.9
BraA03t15512Z Brassica rapa HOM05D007009 ORTHO05D031827 3.5e-06 56.2 86 38.4
THA.LOC104822186 Tarenaya hassleriana HOM05D007009 ORTHO05D008451 4.6e-06 55.8 151 35.1


User provided reference genes

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