Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G0096 Papaver somniferum HOM05D003832 ORTHO05D004365 3.1e-59 231.5 110 100.0
PSO801G0378 Papaver somniferum HOM05D003832 ORTHO05D004365 6.8e-38 160.6 108 74.1
Oeu005620.2 Olea europaea HOM05D003832 ORTHO05D004365 1.9e-27 125.9 106 60.4
Oeu064557.2 Olea europaea HOM05D003832 ORTHO05D004365 3.2e-27 125.2 96 66.7
QL07p021332 Quercus lobata HOM05D003832 ORTHO05D004365 7.1e-27 124.0 96 64.6
CANSAT80G1489 Cannabis sativa HOM05D003832 ORTHO05D004365 9.2e-27 123.6 110 59.1
FvH4_4g07280 Fragaria vesca HOM05D003832 ORTHO05D004365 9.2e-27 123.6 108 57.4
RcHm_v2.0_Chr7g0180711 Rosa chinensis HOM05D003832 ORTHO05D004365 1.2e-26 123.2 108 57.4
RcHm_v2.0_Chr4g0399541 Rosa chinensis HOM05D003832 ORTHO05D004365 2.1e-26 122.5 108 57.4
MD13G1241600 Malus domestica HOM05D003832 ORTHO05D004365 2.7e-26 122.1 108 56.5
FAN17G1929 Fragaria x ananassa HOM05D003832 ORTHO05D004365 3.5e-26 121.7 108 56.5
FAN22G0067 Fragaria x ananassa HOM05D003832 ORTHO05D004365 3.5e-26 121.7 108 56.5
Gohir.D04G130600 Gossypium hirsutum HOM05D003832 ORTHO05D004365 4.6e-26 121.3 110 57.3
CANSAT80G0863 Cannabis sativa HOM05D003832 ORTHO05D004365 6.0e-26 120.9 110 58.2
DCAR_018031 Daucus carota HOM05D003832 ORTHO05D004365 6.0e-26 120.9 108 57.4
VMungo1215G0400 Vigna mungo HOM05D003832 ORTHO05D004365 6.0e-26 120.9 108 57.4
RcHm_v2.0_Chr4g0399571 Rosa chinensis HOM05D003832 ORTHO05D004365 7.8e-26 120.6 108 56.5
FvH4_5g15360 Fragaria vesca HOM05D003832 ORTHO05D004365 1.0e-25 120.2 108 54.6
FAN18G2818 Fragaria x ananassa HOM05D003832 ORTHO05D004365 1.0e-25 120.2 108 54.6
Lalb_Chr13g0300001 Lupinus albus HOM05D003832 ORTHO05D004365 1.0e-25 120.2 108 60.2
Duzib170G0568 Durio zibethinus HOM05D003832 ORTHO05D004365 1.3e-25 119.8 108 57.4
VMungo1127G0216 Vigna mungo HOM05D003832 ORTHO05D004365 1.3e-25 119.8 108 56.5
Prupe.1G075100 Prunus persica HOM05D003832 ORTHO05D004365 1.7e-25 119.4 108 55.6
COL.COLO4_07061 Corchorus olitorius HOM05D003832 ORTHO05D004365 2.3e-25 119.0 96 62.5
SalBow5G5556 Salvia bowleyana HOM05D003832 ORTHO05D004365 3.9e-25 118.2 96 60.4
Dinv41177 Davidia involucrata HOM05D003832 ORTHO05D004365 5.1e-25 117.9 96 63.5
TWI34G0584 Tripterygium wilfordii HOM05D003832 ORTHO05D004365 5.1e-25 117.9 76 73.7
GSVIVG01010856001 Vitis vinifera HOM05D003832 ORTHO05D004365 6.6e-25 117.5 96 64.6
CiPaw.07G197200 Carya illinoinensis HOM05D003832 ORTHO05D004365 8.6e-25 117.1 88 64.8
Peaxi162Scf01038g00134 Petunia axillaris HOM05D003832 ORTHO05D004365 8.6e-25 117.1 96 62.5
Solyc07g008650.4 Solanum lycopersicum HOM05D003832 ORTHO05D004365 8.6e-25 117.1 96 60.4
Sopen07g004580 Solanum pennellii HOM05D003832 ORTHO05D004365 8.6e-25 117.1 96 60.4
FAN04G3185 Fragaria x ananassa HOM05D003832 ORTHO05D004365 1.1e-24 116.7 111 54.1
TWI63G0052 Tripterygium wilfordii HOM05D003832 ORTHO05D004365 1.1e-24 116.7 104 57.7
CDE04G0848 Ceratophyllum demersum HOM05D003832 ORTHO05D004365 1.9e-24 115.9 108 55.6
Ciclev10009594m.g Citrus clementina HOM05D003832 ORTHO05D004365 1.9e-24 115.9 108 57.4
Migut.L01881 Erythranthe guttata HOM05D003832 ORTHO05D004365 1.9e-24 115.9 106 53.8
FAN08G2334 Fragaria x ananassa HOM05D003832 ORTHO05D004365 1.9e-24 115.9 108 54.6
Gohir.A04G090600 Gossypium hirsutum HOM05D003832 ORTHO05D004365 1.9e-24 115.9 81 67.9
MBI19_g15084_MAGBIO Magnolia biondii HOM05D001562 ORTHO05D001437 1.9e-24 115.9 110 55.5
MBI19_g45101_MAGBIO Magnolia biondii HOM05D003832 ORTHO05D004365 1.9e-24 115.9 110 55.5
CAN.G199.14 Capsicum annuum HOM05D003832 ORTHO05D004365 2.5e-24 115.5 96 61.5
Gorai.012G114300 Gossypium raimondii HOM05D003832 ORTHO05D004365 2.5e-24 115.5 81 67.9
Hma1.2p1_1326F.1_g275840 Hydrangea macrophylla HOM05D003832 ORTHO05D004365 2.5e-24 115.5 108 53.7
Sed0004806 Sechium edule HOM05D003832 ORTHO05D004365 2.5e-24 115.5 83 65.1
unitig_8.g4676 Utricularia gibba HOM05D003832 ORTHO05D004365 2.5e-24 115.5 96 60.4
Ah.01g001730 Amaranthus hybridus HOM05D003832 ORTHO05D004365 3.3e-24 115.2 108 52.8
MSTRG.10440 Avicennia marina HOM05D003832 ORTHO05D004365 3.3e-24 115.2 107 55.1
Manes.02G069300 Manihot esculenta HOM05D003832 ORTHO05D004365 3.3e-24 115.2 96 63.5
Thecc.09G186100 Theobroma cacao HOM05D003832 ORTHO05D004365 3.3e-24 115.2 77 71.4
Lj4g0009154 Lotus japonicus HOM05D003832 ORTHO05D004365 4.3e-24 114.8 96 61.5
Phvul.003G141300 Phaseolus vulgaris HOM05D003832 ORTHO05D004365 5.6e-24 114.4 108 55.6
Sabra06G0056000 Salix brachista HOM05D003832 ORTHO05D004365 5.6e-24 114.4 108 54.6
FAN12G0553 Fragaria x ananassa HOM05D003811 ORTHO05D004470 7.3e-24 114.0 76 69.7
Psat3g085920 Pisum sativum HOM05D003832 ORTHO05D004365 7.3e-24 114.0 108 56.5
Ah.01g002120 Amaranthus hybridus HOM05D003832 ORTHO05D004365 9.5e-24 113.6 108 53.7
AUR62017542 Chenopodium quinoa HOM05D003832 ORTHO05D004365 9.5e-24 113.6 108 54.6
ECA232G4969 Erigeron canadensis HOM05D003832 ORTHO05D004365 9.5e-24 113.6 108 50.9
vmacro20813 Vaccinium macrocarpon HOM05D003832 ORTHO05D004365 9.5e-24 113.6 96 59.4
arahy.Tifrunner.gnm1.ann1.SNS3QW Arachis hypogaea HOM05D003832 ORTHO05D004365 1.2e-23 113.2 81 65.4
HanXRQChr16g0514821 Helianthus annuus HOM05D003832 ORTHO05D004365 1.2e-23 113.2 102 56.9
THA.LOC104800261 Tarenaya hassleriana HOM05D003832 ORTHO05D004365 1.2e-23 113.2 108 51.9
CDE07G0789 Ceratophyllum demersum HOM05D001368 ORTHO05D003846 1.6e-23 112.8 81 67.9
TAR626G0116 Trochodendron aralioides HOM05D003832 ORTHO05D004365 1.6e-23 112.8 88 62.5
Atru.chr12.1654 Acer truncatum HOM05D003832 ORTHO05D004365 2.1e-23 112.5 114 55.3
arahy.Tifrunner.gnm1.ann1.K6AR5W Arachis hypogaea HOM05D003832 ORTHO05D004365 2.1e-23 112.5 89 61.8
Nitab4.5_0000725g0040 Nicotiana tabacum HOM05D003832 ORTHO05D004365 2.1e-23 112.5 88 63.6
Rhsim01G0116900 Rhododendron simsii HOM05D003832 ORTHO05D004365 2.1e-23 112.5 86 62.8
arahy.Tifrunner.gnm1.ann1.S5DLTG Arachis hypogaea HOM05D003832 ORTHO05D004365 2.8e-23 112.1 76 68.4
MELO3C017427.2 Cucumis melo HOM05D003832 ORTHO05D004365 2.8e-23 112.1 71 71.8
CsaV3_1G031890 Cucumis sativus L. HOM05D003832 ORTHO05D004365 2.8e-23 112.1 71 71.8
Eucgr.E02171 Eucalyptus grandis HOM05D003832 ORTHO05D004365 2.8e-23 112.1 96 59.4
Eucgr.E02232 Eucalyptus grandis HOM05D003832 ORTHO05D004365 2.8e-23 112.1 96 59.4
Aa31LG3G7130 Aethionema arabicum HOM05D003832 ORTHO05D004365 3.6e-23 111.7 112 52.7
A08p05010 Brassica napus HOM05D003832 ORTHO05D004365 4.7e-23 111.3 99 57.6
BraA08t32523Z Brassica rapa HOM05D003832 ORTHO05D004365 4.7e-23 111.3 99 57.6
ClCG06G013620 Citrullus lanatus HOM05D003832 ORTHO05D004365 6.2e-23 110.9 76 67.1
Eucgr.E02911 Eucalyptus grandis HOM05D003832 ORTHO05D004365 6.2e-23 110.9 88 60.2
Lsat_1_v5_gn_4_41160 Lactuca sativa HOM05D003832 ORTHO05D004365 6.2e-23 110.9 108 52.8
Medtr7g086830 Medicago truncatula HOM05D003832 ORTHO05D004365 6.2e-23 110.9 108 55.6
SalBow5G0739 Salvia bowleyana HOM05D003832 ORTHO05D004365 6.2e-23 110.9 72 70.8
Ah.01g002650 Amaranthus hybridus HOM05D003832 ORTHO05D004365 8.1e-23 110.5 108 52.8
Eucgr.E02530 Eucalyptus grandis HOM05D003832 ORTHO05D004365 8.1e-23 110.5 88 59.1
Potri.006G075300 Populus trichocarpa HOM05D003832 ORTHO05D004365 8.1e-23 110.5 108 53.7
TPR.G17987 Trifolium pratense HOM05D003832 ORTHO05D004365 8.1e-23 110.5 108 55.6
EL10Ac9g22760 Beta vulgaris HOM05D003832 ORTHO05D004365 1.4e-22 109.8 109 54.1
Haze_22022 Corylus avellana HOM05D003832 ORTHO05D004365 1.4e-22 109.8 76 68.4
ECA234G0864 Erigeron canadensis HOM05D003832 ORTHO05D004365 1.4e-22 109.8 72 68.1
Glyma.17G059300 Glycine max HOM05D003832 ORTHO05D004365 1.4e-22 109.8 81 65.4
Eucgr.E02551 Eucalyptus grandis HOM05D003832 ORTHO05D004365 1.8e-22 109.4 72 70.8
Glyma.13G100600 Glycine max HOM05D003832 ORTHO05D004365 1.8e-22 109.4 81 65.4
ATR0307G033 Amborella trichopoda HOM05D003832 ORTHO05D004365 2.4e-22 109.0 71 70.4
Eucgr.E02102 Eucalyptus grandis HOM05D003832 ORTHO05D004365 4.0e-22 108.2 96 58.3
Nn3g18876 Nelumbo nucifera HOM05D003832 ORTHO05D004365 4.0e-22 108.2 96 59.4
BcaB07g33785 Brassica carinata HOM05D003832 ORTHO05D004365 5.2e-22 107.8 108 53.7
Eucgr.E02915 Eucalyptus grandis HOM05D003832 ORTHO05D004365 5.2e-22 107.8 88 59.1
Thhalv10001035m.g Eutrema salsugineum HOM05D003832 ORTHO05D004365 5.2e-22 107.8 97 57.7
TPR.G31075 Trifolium pratense HOM05D003832 ORTHO05D004365 5.2e-22 107.8 108 54.6
A08p05170 Brassica napus HOM05D003832 ORTHO05D004365 6.8e-22 107.5 96 57.3
AT1G48175 Arabidopsis thaliana HOM05D003832 ORTHO05D004365 1.2e-21 106.7 93 58.1
BcaB04g17461 Brassica carinata HOM05D003832 ORTHO05D004365 1.2e-21 106.7 99 54.5
BraA08t32534Z Brassica rapa HOM05D003832 ORTHO05D004365 1.2e-21 106.7 99 55.6
Cc02_g28290 Coffea canephora HOM05D003832 ORTHO05D004365 1.2e-21 106.7 71 69.0
C06p02680 Brassica napus HOM05D003832 ORTHO05D004365 1.5e-21 106.3 96 56.2
Thhalv10012316m.g Eutrema salsugineum HOM05D003832 ORTHO05D004365 1.5e-21 106.3 101 55.4
Sp1g35130 Schrenkiella parvula HOM05D003832 ORTHO05D004365 1.5e-21 106.3 99 55.6
Eucgr.E02201 Eucalyptus grandis HOM05D003832 ORTHO05D004365 2.0e-21 105.9 92 57.6
Lsat_1_v5_gn_5_90120 Lactuca sativa HOM05D003832 ORTHO05D004365 2.0e-21 105.9 104 51.9
Sp7g33250 Schrenkiella parvula HOM05D003832 ORTHO05D004365 2.0e-21 105.9 96 57.3
Sc20g0003900 Simmondsia chinensis HOM05D003832 ORTHO05D004365 2.0e-21 105.9 76 67.1
Aqoxy3G00356 Aquilegia oxysepala HOM05D003832 ORTHO05D004365 3.4e-21 105.1 87 58.6
Aqoxy2G00660 Aquilegia oxysepala HOM05D003832 ORTHO05D004365 4.4e-21 104.8 72 68.1
BolC6t35394H Brassica oleracea HOM05D003832 ORTHO05D004365 4.4e-21 104.8 74 66.2
BcaC07g37168 Brassica carinata HOM05D003832 ORTHO05D004365 5.8e-21 104.4 99 54.5
BolC8t47358H Brassica oleracea HOM05D003832 ORTHO05D004365 5.8e-21 104.4 99 54.5
AL1G54750 Arabidopsis lyrata HOM05D003832 ORTHO05D004365 9.9e-21 103.6 97 54.6
Carub.0001s3726 Capsella rubella HOM05D003832 ORTHO05D004365 9.9e-21 103.6 97 55.7
AUR62005177 Chenopodium quinoa HOM05D003832 ORTHO05D004365 1.3e-20 103.2 87 56.3
Nitab4.5_0010556g0010 Nicotiana tabacum HOM05D003832 ORTHO05D004365 1.3e-20 103.2 100 54.0
Eucgr.E02175 Eucalyptus grandis HOM05D003832 ORTHO05D004365 1.7e-20 102.8 90 56.7
Nitab4.5_0000617g0240 Nicotiana tabacum HOM05D003832 ORTHO05D004365 1.7e-20 102.8 100 56.0
BcaC08g43013 Brassica carinata HOM05D003832 ORTHO05D004365 2.2e-20 102.4 96 56.2
C08p05410 Brassica napus HOM05D003832 ORTHO05D004365 2.2e-20 102.4 87 56.3
C09p47960 Brassica napus HOM05D003832 ORTHO05D004365 3.8e-20 101.7 71 64.8
BcaC06g35194 Brassica carinata HOM05D003832 ORTHO05D004365 4.9e-20 101.3 76 61.8
HPP92_008659 Vanilla planifolia HOM05D003832 ORTHO05D004365 6.4e-20 100.9 75 61.3
Eucgr.E02142 Eucalyptus grandis HOM05D003832 ORTHO05D004365 1.4e-19 99.8 76 61.8
SEGI_25137 Sequoiadendron giganteum HOM05D003832 ORTHO05D004365 1.9e-19 99.4 108 43.5
Cc02_g28310 Coffea canephora HOM05D003832 ORTHO05D004365 2.4e-19 99.0 71 62.0
A05p26850 Brassica napus HOM05D003832 ORTHO05D004365 3.2e-19 98.6 70 64.3
A07p42340 Brassica napus HOM05D003832 ORTHO05D004365 3.2e-19 98.6 70 64.3
BraA05t21564Z Brassica rapa HOM05D003832 ORTHO05D004365 3.2e-19 98.6 70 64.3
SMO164G0036 Selaginella moellendorffii HOM05D003832 ORTHO05D004365 3.2e-19 98.6 78 60.3
Zm00001eb054120 Zea mays HOM05D003832 ORTHO05D004365 7.1e-19 97.4 99 50.5
BolC9t57639H Brassica oleracea HOM05D003832 ORTHO05D004365 1.2e-18 96.7 71 62.0
C07p18790 Brassica napus HOM05D003832 ORTHO05D004365 1.6e-18 96.3 71 60.6
CBR_g19929 Chara braunii HOM05D003832 ORTHO05D004365 7.8e-18 94.0 72 56.9
EL10Ac4g09380 Beta vulgaris HOM05D003832 ORTHO05D004365 1.0e-17 93.6 85 51.8
EL10Ac4g09383 Beta vulgaris HOM05D003832 ORTHO05D004365 1.0e-17 93.6 85 51.8
BraA05t20080Z Brassica rapa HOM05D003832 ORTHO05D004365 1.0e-17 93.6 70 62.9
BolC7t42388H Brassica oleracea HOM05D003832 ORTHO05D004365 1.1e-16 90.1 93 47.3
Mapoly0047s0093 Marchantia polymorpha HOM05D003832 ORTHO05D004365 1.5e-16 89.7 107 44.9
MCO05G158 Micromonas commoda HOM05D003832 ORTHO05D004365 1.6e-15 86.3 96 46.9
AUR62015080 Chenopodium quinoa HOM05D003832 ORTHO05D004365 2.1e-15 85.9 65 60.0
Lj5A749G38 Lonicera japonica HOM05D003832 ORTHO05D004365 3.4e-13 78.6 49 67.3
Pp3c14_6040 Physcomitrium patens HOM05D003832 ORTHO05D004365 7.6e-13 77.4 74 48.6
SGA_v2.0_scaffold14G07081 Striga asiatica HOM05D003832 ORTHO05D004365 1.9e-11 72.8 106 41.5
SGA_v2.0_scaffold231G43408 Striga asiatica HOM05D003832 ORTHO05D004365 1.9e-11 72.8 106 41.5
Cre12.g509600 Chlamydomonas reinhardtii HOM05D003832 ORTHO05D004365 2.4e-11 72.4 50 62.0
CSS0017606 Camellia sinensis var. sinensis HOM05D003832 ORTHO05D004365 5.4e-11 71.2 49 65.3
CSS0037914 Camellia sinensis var. sinensis HOM05D003832 ORTHO05D004365 5.4e-11 71.2 49 65.3
PGSC0003DMG400022976 Solanum tuberosum HOM05D003832 ORTHO05D004365 2.1e-10 69.3 102 41.2
Cfa026363 Carpinus fangiana HOM05D011254 ORTHO05D013441 1.0e-09 67.0 48 62.5
PRCOL_00000145 Prasinoderma coloniale HOM05D003832 ORTHO05D004365 1.0e-09 67.0 42 71.4
Eucgr.E02296 Eucalyptus grandis HOM05D003832 ORTHO05D004365 3.9e-09 65.1 51 58.8
Eucgr.E02248 Eucalyptus grandis HOM05D003832 ORTHO05D004365 1.1e-08 63.5 48 58.3
Haze_26440 Corylus avellana HOM05D003832 ORTHO05D004365 1.5e-08 63.2 78 38.5
CARHR289090 Cardamine hirsuta HOM05D003832 ORTHO05D004365 7.3e-08 60.8 59 50.8
Eucgr.E02304 Eucalyptus grandis HOM05D003832 ORTHO05D004365 4.8e-07 58.2 47 55.3
BcaC06g36546 Brassica carinata HOM05D003832 ORTHO05D004365 4.0e-06 55.1 33 72.7


User provided reference genes

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