Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 1.6e-115 419.5 214 100.0
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 4.9e-109 397.9 214 94.9
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 1.7e-37 160.2 269 44.2
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 3.3e-36 156.0 264 42.4
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 3.3e-36 156.0 256 47.3
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 4.3e-36 155.6 261 42.9
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 6.4e-32 141.7 267 42.3
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 4.1e-31 139.0 258 41.1
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 5.2e-26 122.1 236 38.1
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 2.6e-25 119.8 275 34.9
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 1.3e-24 117.5 254 33.9
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 2.4e-23 113.2 241 38.6
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 4.1e-23 112.5 260 34.2
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 5.4e-23 112.1 262 34.7
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 7.1e-23 111.7 244 36.5
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.2e-22 110.9 267 35.2
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 3.5e-22 109.4 234 36.8
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.3e-21 107.5 267 34.8
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 6.6e-21 105.1 261 34.9
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 6.6e-21 105.1 241 34.9
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 8.6e-21 104.8 236 36.4
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 8.6e-21 104.8 267 34.1
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 8.6e-21 104.8 252 35.3
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 1.5e-20 104.0 271 34.3
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 2.5e-20 103.2 266 34.2
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 2.5e-20 103.2 266 34.2
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 4.3e-20 102.4 260 31.2
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 4.3e-20 102.4 280 30.7
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 5.6e-20 102.1 264 33.0
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 5.6e-20 102.1 264 33.0
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 7.3e-20 101.7 269 33.1
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 1.6e-19 100.5 268 35.1
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 2.1e-19 100.1 257 31.9
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 2.1e-19 100.1 267 33.3
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 2.1e-19 100.1 247 33.2
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 2.8e-19 99.8 252 32.5
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 3.6e-19 99.4 247 36.0
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 4.7e-19 99.0 257 31.5
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 4.7e-19 99.0 251 33.9
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 6.2e-19 98.6 209 39.7
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 6.2e-19 98.6 280 31.1
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 1.8e-18 97.1 302 29.8
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 2.3e-18 96.7 238 32.8
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 2.3e-18 96.7 275 32.7
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 2.3e-18 96.7 267 33.0
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 4.0e-18 95.9 227 33.0
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 6.8e-18 95.1 228 36.0
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 1.2e-17 94.4 269 33.1
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 2.0e-17 93.6 198 37.9
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 2.0e-17 93.6 232 34.9
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 3.4e-17 92.8 233 34.3
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 7.6e-17 91.7 245 36.3
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 7.6e-17 91.7 248 32.3
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 1.7e-16 90.5 129 44.2
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 2.2e-16 90.1 210 36.2
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 2.2e-16 90.1 261 31.8
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 2.9e-16 89.7 249 32.1
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 2.9e-16 89.7 273 29.7
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 4.9e-16 89.0 287 31.7
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 5.4e-15 85.5 273 30.8
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 9.2e-15 84.7 219 35.6
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.2e-14 84.3 258 32.6
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.2e-14 84.3 258 32.6
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.2e-14 84.3 280 30.7
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 1.2e-14 84.3 263 31.9
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.6e-14 84.0 258 33.3
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 2.7e-14 83.2 229 34.5
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 2.7e-14 83.2 167 37.7
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 3.5e-14 82.8 231 32.0
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 3.5e-14 82.8 264 30.7
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 3.5e-14 82.8 124 44.4
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 4.6e-14 82.4 137 39.4
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 4.6e-14 82.4 272 29.8
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 7.8e-14 81.6 129 39.5
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 1.0e-13 81.3 138 42.8
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 1.3e-13 80.9 223 33.6
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 1.3e-13 80.9 231 33.3
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 1.3e-13 80.9 296 27.0
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 1.7e-13 80.5 229 33.6
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 3.9e-13 79.3 286 29.0
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 5.1e-13 79.0 250 31.2
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 5.1e-13 79.0 241 33.2
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 5.1e-13 79.0 240 34.2
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 6.6e-13 78.6 243 31.7
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 6.6e-13 78.6 269 33.1
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 8.6e-13 78.2 255 32.2
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 8.6e-13 78.2 265 29.8
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 8.6e-13 78.2 263 30.4
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 1.5e-12 77.4 229 33.2
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 2.5e-12 76.6 134 39.6
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 2.5e-12 76.6 227 34.8
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 4.3e-12 75.9 266 32.0
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 4.3e-12 75.9 227 33.0
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 2.1e-11 73.6 245 32.2
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 3.6e-11 72.8 245 31.8
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 6.2e-11 72.0 240 27.9
HPP92_012357 Vanilla planifolia HOM05D006486 ORTHO05D007888 6.2e-11 72.0 201 31.8
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 1.4e-10 70.9 241 29.5
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 3.1e-10 69.7 229 31.4
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 3.1e-10 69.7 126 38.9
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 4.0e-10 69.3 234 32.1
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 1.2e-09 67.8 246 31.3
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.6e-09 66.6 206 32.0
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 2.6e-09 66.6 206 32.0
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 3.4e-09 66.2 341 24.3
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 4.4e-09 65.9 134 33.6
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 9.9e-09 64.7 130 33.1
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 2.2e-08 63.5 125 39.2
AT4G05018 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 3.8e-08 62.8 140 36.4
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 4.9e-08 62.4 51 70.6
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 6.4e-08 62.0 226 30.1
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 6.4e-08 62.0 249 28.5
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 2.4e-07 60.1 57 63.2
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 3.2e-07 59.7 125 37.6
Oeu021600.1 Olea europaea HOM05D006486 ORTHO05D007888 9.3e-07 58.2 74 52.7


User provided reference genes

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