Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO824G0037 Papaver somniferum HOM05D013489 ORTHO05D010771 6.4e-79 297.4 150 100.0
PSO017G4812 Papaver somniferum HOM05D013489 ORTHO05D010771 1.8e-20 103.2 101 55.4
PSO832G0620 Papaver somniferum HOM05D013489 ORTHO05D010771 5.9e-16 88.2 100 44.0
PSO170G3063 Papaver somniferum HOM05D013489 ORTHO05D010771 1.3e-15 87.0 90 48.9
PSO507G0005 Papaver somniferum HOM05D013489 ORTHO05D010771 1.3e-15 87.0 94 44.7
PSO832G0486 Papaver somniferum HOM05D013489 ORTHO05D010771 5.5e-14 81.6 83 45.8
PSO832G3867 Papaver somniferum HOM05D013489 ORTHO05D010771 1.2e-13 80.5 86 45.3
Aqoxy7G01316 Aquilegia oxysepala HOM05D013489 ORTHO05D000038 9.1e-09 64.3 57 47.4
Aqoxy2G00662 Aquilegia oxysepala HOM05D013489 ORTHO05D010771 1.0e-07 60.8 74 36.5
THA.LOC104817182 Tarenaya hassleriana HOM05D000082 ORTHO05D000038 1.0e-07 60.8 63 47.6
Aqoxy7G01318 Aquilegia oxysepala HOM05D013489 ORTHO05D010771 2.9e-07 59.3 63 42.9
CSS0035273 Camellia sinensis var. sinensis HOM05D009314 ORTHO05D010771 2.9e-07 59.3 57 40.4
CSS0040039 Camellia sinensis var. sinensis HOM05D009314 ORTHO05D010771 2.9e-07 59.3 57 40.4
CANSAT56G1979 Cannabis sativa HOM05D000157 ORTHO05D001065 3.8e-07 58.9 50 48.0
Lj1g0026265 Lotus japonicus HOM05D000082 ORTHO05D000038 5.0e-07 58.5 101 34.7
RcHm_v2.0_Chr4g0384981 Rosa chinensis HOM05D000082 ORTHO05D000038 5.0e-07 58.5 69 43.5
MD09G1052200 Malus domestica HOM05D000082 ORTHO05D000038 6.5e-07 58.2 66 42.4
CANSAT54G0565 Cannabis sativa HOM05D000082 ORTHO05D000038 8.5e-07 57.8 62 43.5
CANSAT54G1654 Cannabis sativa HOM05D000082 ORTHO05D000038 8.5e-07 57.8 62 43.5
CANSAT54G2700 Cannabis sativa HOM05D000082 ORTHO05D000038 8.5e-07 57.8 62 43.5
COL.COLO4_31877 Corchorus olitorius HOM05D000082 ORTHO05D000038 1.1e-06 57.4 68 36.8
CANSAT54G1279 Cannabis sativa HOM05D000082 ORTHO05D000038 1.4e-06 57.0 62 43.5
THA.LOC104813141 Tarenaya hassleriana HOM05D000082 ORTHO05D000038 1.4e-06 57.0 63 42.9
FvH4_5g15260 Fragaria vesca HOM05D000082 ORTHO05D000038 3.2e-06 55.8 75 40.0
FAN18G2006 Fragaria x ananassa HOM05D000082 ORTHO05D000038 3.2e-06 55.8 75 40.0
THA.LOC104808913 Tarenaya hassleriana HOM05D000082 ORTHO05D010264 3.2e-06 55.8 51 47.1
ATR0326G031 Amborella trichopoda HOM05D000082 ORTHO05D014356 4.2e-06 55.5 50 42.0
Duzib052G0782 Durio zibethinus HOM05D000082 ORTHO05D014197 4.2e-06 55.5 72 37.5
FAN08G3421 Fragaria x ananassa HOM05D000082 ORTHO05D000038 4.2e-06 55.5 75 40.0
Hma1.2p1_0002F.1_g003140 Hydrangea macrophylla HOM05D000082 ORTHO05D000038 4.2e-06 55.5 67 41.8
RcHm_v2.0_Chr1g0336601 Rosa chinensis HOM05D000082 ORTHO05D000038 4.2e-06 55.5 59 40.7
SGA_v2.0_scaffold12G06045 Striga asiatica HOM05D011795 ORTHO05D001065 4.2e-06 55.5 44 50.0
Thecc.09G250000 Theobroma cacao HOM05D009314 ORTHO05D010771 4.2e-06 55.5 56 42.9
FAN13G1452 Fragaria x ananassa HOM05D000082 ORTHO05D000038 5.5e-06 55.1 75 40.0
Hma1.2p1_1754F.1_g300910 Hydrangea macrophylla HOM05D000082 ORTHO05D000038 5.5e-06 55.1 49 49.0
Aa31LG1G14550 Aethionema arabicum HOM05D001172 ORTHO05D001128 7.2e-06 54.7 47 46.8
Duzib168G0779 Durio zibethinus HOM05D009314 ORTHO05D010771 7.2e-06 54.7 95 33.7
FAN05G0156 Fragaria x ananassa HOM05D000082 ORTHO05D000038 7.2e-06 54.7 106 34.9
Potri.005G062400 Populus trichocarpa HOM05D000082 ORTHO05D000038 7.2e-06 54.7 61 42.6
PRCOL_00005894 Prasinoderma coloniale HOM05D002398 ORTHO05D002817 7.2e-06 54.7 61 45.9
CANSAT64G2090 Cannabis sativa HOM05D000086 ORTHO05D000038 9.4e-06 54.3 49 42.9
MD00G1051600 Malus domestica HOM05D010671 ORTHO05D020668 9.4e-06 54.3 58 41.4
MD02G1237700 Malus domestica HOM05D000082 ORTHO05D000038 9.4e-06 54.3 71 36.6
MD07G1077200 Malus domestica HOM05D000082 ORTHO05D000038 9.4e-06 54.3 50 40.0
HPP92_011044 Vanilla planifolia HOM05D000354 ORTHO05D000747 9.4e-06 54.3 44 45.5


User provided reference genes

Program Settings