Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO801G0746 Papaver somniferum HOM05D004760 ORTHO05D006114 4.6e-62 241.1 128 100.0
PSO339G3989 Papaver somniferum HOM05D004760 ORTHO05D006114 9.6e-52 206.8 117 93.2
TAR636G2244 Trochodendron aralioides HOM05D004760 ORTHO05D006114 1.0e-37 160.2 119 71.4
CAN.G546.10 Capsicum annuum HOM05D004760 ORTHO05D006114 1.4e-37 159.8 129 66.7
PGSC0003DMG400008072 Solanum tuberosum HOM05D004760 ORTHO05D006114 1.5e-36 156.4 129 65.9
TWI79G1159 Tripterygium wilfordii HOM05D004760 ORTHO05D006114 1.5e-36 156.4 129 67.4
PGSC0003DMG400008118 Solanum tuberosum HOM05D004760 ORTHO05D006114 2.0e-36 156.0 129 65.1
CSS0038756 Camellia sinensis var. sinensis HOM05D004760 ORTHO05D006114 2.5e-36 155.6 129 67.4
Sopen11g027800 Solanum pennellii HOM05D004760 ORTHO05D006114 2.5e-36 155.6 130 65.4
PGSC0003DMG400008071 Solanum tuberosum HOM05D004760 ORTHO05D006114 2.5e-36 155.6 122 67.2
Prupe.6G108700 Prunus persica HOM05D004760 ORTHO05D006114 3.3e-36 155.2 129 67.4
FAN11G0015 Fragaria x ananassa HOM05D004760 ORTHO05D006114 4.3e-36 154.8 119 68.1
FAN25G2761 Fragaria x ananassa HOM05D004760 ORTHO05D006114 5.7e-36 154.5 126 66.7
Potri.004G214400 Populus trichocarpa HOM05D004760 ORTHO05D006114 9.7e-36 153.7 119 67.2
TWI31G0427 Tripterygium wilfordii HOM05D004760 ORTHO05D006114 9.7e-36 153.7 123 68.3
Ciclev10002842m.g Citrus clementina HOM05D004760 ORTHO05D006114 1.3e-35 153.3 129 65.1
Cc01_g10530 Coffea canephora HOM05D004760 ORTHO05D006114 1.3e-35 153.3 127 65.4
Dinv29358 Davidia involucrata HOM05D004760 ORTHO05D006114 1.7e-35 152.9 129 64.3
QL01p015831 Quercus lobata HOM05D004760 ORTHO05D006114 1.7e-35 152.9 129 64.3
Atru.chr10.822 Acer truncatum HOM05D004760 ORTHO05D006114 2.2e-35 152.5 129 65.1
Aqoxy1G01159 Aquilegia oxysepala HOM05D004760 ORTHO05D006114 2.2e-35 152.5 118 67.8
Manes.15G173300 Manihot esculenta HOM05D004760 ORTHO05D006114 2.2e-35 152.5 118 69.5
CANSAT80G1575 Cannabis sativa HOM05D004760 ORTHO05D006114 2.8e-35 152.1 123 65.0
Gohir.A03G030600 Gossypium hirsutum HOM05D004760 ORTHO05D006114 2.8e-35 152.1 119 66.4
Gohir.D03G137800 Gossypium hirsutum HOM05D004760 ORTHO05D006114 2.8e-35 152.1 118 67.8
Gorai.003G144700 Gossypium raimondii HOM05D004760 ORTHO05D006114 2.8e-35 152.1 118 67.8
Rhsim01G0212000 Rhododendron simsii HOM05D004760 ORTHO05D006114 2.8e-35 152.1 129 64.3
FAN21G0726 Fragaria x ananassa HOM05D004760 ORTHO05D006114 3.7e-35 151.8 129 64.3
Lalb_Chr01g0004501 Lupinus albus HOM05D004760 ORTHO05D006114 4.8e-35 151.4 129 64.3
Sed0008060 Sechium edule HOM05D004760 ORTHO05D006114 6.3e-35 151.0 127 65.4
Lj3g0014185 Lotus japonicus HOM05D004760 ORTHO05D006114 8.2e-35 150.6 129 65.1
Medtr7g083650 Medicago truncatula HOM05D004760 ORTHO05D006114 8.2e-35 150.6 125 67.2
PGSC0003DMG400005521 Solanum tuberosum HOM05D004760 ORTHO05D006114 8.2e-35 150.6 122 66.4
ClCG02G021440 Citrullus lanatus HOM05D004760 ORTHO05D006114 1.1e-34 150.2 128 64.1
COL.COLO4_03696 Corchorus olitorius HOM05D004760 ORTHO05D006114 1.1e-34 150.2 124 65.3
Manes.04G015300 Manihot esculenta HOM05D004760 ORTHO05D006114 1.1e-34 150.2 130 62.3
vmacro14407 Vaccinium macrocarpon HOM05D004760 ORTHO05D006114 1.1e-34 150.2 129 63.6
Psat3g094560 Pisum sativum HOM05D004760 ORTHO05D006114 1.4e-34 149.8 127 65.4
MSTRG.22442 Avicennia marina HOM05D004760 ORTHO05D006114 1.8e-34 149.4 123 62.6
Migut.D02262 Erythranthe guttata HOM05D004760 ORTHO05D006114 1.8e-34 149.4 128 62.5
Atru.chr10.811 Acer truncatum HOM05D004760 ORTHO05D006114 2.4e-34 149.1 129 64.3
Cpa.g.sc94.2 Carica papaya HOM05D004760 ORTHO05D006114 3.1e-34 148.7 119 65.5
CDE09G0496 Ceratophyllum demersum HOM05D004760 ORTHO05D001676 3.1e-34 148.7 118 71.2
MELO3C033128.2 Cucumis melo HOM05D004760 ORTHO05D006114 3.1e-34 148.7 128 60.9
GSVIVG01031504001 Vitis vinifera HOM05D004760 ORTHO05D006114 3.1e-34 148.7 119 64.7
Eucgr.C00623 Eucalyptus grandis HOM05D004760 ORTHO05D006114 4.1e-34 148.3 122 65.6
Lj1C207G1 Lonicera japonica HOM05D000681 ORTHO05D003832 4.1e-34 148.3 119 66.4
SalBow3G2862 Salvia bowleyana HOM05D004760 ORTHO05D006114 4.1e-34 148.3 119 65.5
Cfa010341 Carpinus fangiana HOM05D004760 ORTHO05D006114 5.3e-34 147.9 129 61.2
Duzib150G1663 Durio zibethinus HOM05D004760 ORTHO05D006114 6.9e-34 147.5 119 64.7
Glyma.03G099400 Glycine max HOM05D004760 ORTHO05D006114 6.9e-34 147.5 122 63.9
MD00G1033500 Malus domestica HOM05D004760 ORTHO05D006114 6.9e-34 147.5 129 64.3
CsaV3_4G002110 Cucumis sativus L. HOM05D004760 ORTHO05D006114 9.1e-34 147.1 128 60.9
Thecc.09G348500 Theobroma cacao HOM05D004760 ORTHO05D006114 9.1e-34 147.1 119 64.7
TPR.G21885 Trifolium pratense HOM05D004760 ORTHO05D006114 9.1e-34 147.1 119 67.2
Haze_23747 Corylus avellana HOM05D004760 ORTHO05D006114 1.5e-33 146.4 129 60.5
CiPaw.14G087800 Carya illinoinensis HOM05D004760 ORTHO05D006114 2.0e-33 146.0 123 63.4
CDE02G4002 Ceratophyllum demersum HOM05D004760 ORTHO05D006114 2.0e-33 146.0 118 70.3
Ca_08122_v3 Cicer arietinum L. HOM05D004760 ORTHO05D006114 2.0e-33 146.0 119 65.5
Nitab4.5_0002033g0060 Nicotiana tabacum HOM05D004760 ORTHO05D006114 2.0e-33 146.0 111 69.4
THA.LOC104810873 Tarenaya hassleriana HOM05D004760 ORTHO05D006114 2.6e-33 145.6 119 63.0
Lsat_1_v5_gn_2_99521 Lactuca sativa HOM05D004760 ORTHO05D006114 3.4e-33 145.2 129 59.7
arahy.Tifrunner.gnm1.ann1.TWBW4W Arachis hypogaea HOM05D004760 ORTHO05D006114 4.5e-33 144.8 129 62.0
Oeu014013.2 Olea europaea HOM05D004760 ORTHO05D006114 4.5e-33 144.8 119 64.7
arahy.Tifrunner.gnm1.ann1.HQ4852 Arachis hypogaea HOM05D004760 ORTHO05D006114 5.9e-33 144.4 129 61.2
Oeu013537.1 Olea europaea HOM05D004760 ORTHO05D006114 1.0e-32 143.7 122 65.6
arahy.Tifrunner.gnm1.ann1.KI0H1T Arachis hypogaea HOM05D004760 ORTHO05D006114 1.3e-32 143.3 129 61.2
AUR62014927 Chenopodium quinoa HOM05D004760 ORTHO05D006114 1.3e-32 143.3 122 63.1
MBI18_g16202_MAGBIO Magnolia biondii HOM05D004760 ORTHO05D006114 2.2e-32 142.5 119 63.9
arahy.Tifrunner.gnm1.ann1.DTBR3Z Arachis hypogaea HOM05D004760 ORTHO05D006114 2.9e-32 142.1 129 59.7
VMungo0331G0086 Vigna mungo HOM05D004760 ORTHO05D006114 2.9e-32 142.1 122 60.7
CARHR150950 Cardamine hirsuta HOM05D004760 ORTHO05D006114 3.8e-32 141.7 125 60.8
AUR62034436 Chenopodium quinoa HOM05D004760 ORTHO05D006114 3.8e-32 141.7 117 63.2
BcaC01g02002 Brassica carinata HOM05D004760 ORTHO05D006114 6.5e-32 141.0 126 60.3
A06p21630 Brassica napus HOM05D004760 ORTHO05D006114 6.5e-32 141.0 126 60.3
C03p69650 Brassica napus HOM05D004760 ORTHO05D006114 6.5e-32 141.0 126 60.3
BolC3t19223H Brassica oleracea HOM05D004760 ORTHO05D006114 6.5e-32 141.0 126 60.3
BraA06t25253Z Brassica rapa HOM05D004760 ORTHO05D006114 6.5e-32 141.0 126 60.3
PGSC0003DMG400035806 Solanum tuberosum HOM05D004760 ORTHO05D006114 6.5e-32 141.0 122 62.3
FAN16G0053 Fragaria x ananassa HOM05D004760 ORTHO05D006114 1.1e-31 140.2 130 60.8
Sp5g16240 Schrenkiella parvula HOM05D004760 ORTHO05D006114 1.1e-31 140.2 126 61.1
Aa31LG4G14120 Aethionema arabicum HOM05D004760 ORTHO05D006114 1.9e-31 139.4 119 61.3
DCAR_013702 Daucus carota HOM05D004760 ORTHO05D006114 1.9e-31 139.4 119 64.7
ECA233G3649 Erigeron canadensis HOM05D004760 ORTHO05D006114 2.5e-31 139.0 118 61.0
Hund01473 Selenicereus undatus HOM05D004760 ORTHO05D006114 2.5e-31 139.0 122 60.7
Sc06g0010910 Simmondsia chinensis HOM05D004760 ORTHO05D006114 2.5e-31 139.0 123 61.0
Thhalv10002715m.g Eutrema salsugineum HOM05D004760 ORTHO05D006114 4.2e-31 138.3 125 60.0
HPP92_025344 Vanilla planifolia HOM05D004760 ORTHO05D006114 4.2e-31 138.3 120 59.2
BcaB01g01128 Brassica carinata HOM05D004760 ORTHO05D006114 5.5e-31 137.9 126 58.7
Sc06g0010990 Simmondsia chinensis HOM05D004760 ORTHO05D006114 5.5e-31 137.9 123 60.2
Nitab4.5_0002186g0070 Nicotiana tabacum HOM05D004760 ORTHO05D006114 1.2e-30 136.7 111 65.8
AT3G45020 Arabidopsis thaliana HOM05D004760 ORTHO05D006114 2.1e-30 136.0 117 60.7
PGR083G1146 Punica granatum HOM05D004760 ORTHO05D006114 2.1e-30 136.0 123 58.5
unitig_21.g20191 Utricularia gibba HOM05D001235 ORTHO05D005684 2.1e-30 136.0 122 59.0
SGA_v2.0_scaffold263G45970 Striga asiatica HOM05D004760 ORTHO05D006114 3.6e-30 135.2 118 60.2
Rhsim13G0099000 Rhododendron simsii HOM05D004760 ORTHO05D006114 6.1e-30 134.4 109 65.1
AL5G23480 Arabidopsis lyrata HOM05D004760 ORTHO05D006114 7.9e-30 134.0 117 59.0
Sabra04G0145500 Salix brachista HOM05D004760 ORTHO05D006114 1.0e-29 133.7 111 63.1
Carub.0005s1081 Capsella rubella HOM05D004760 ORTHO05D006114 1.4e-29 133.3 115 60.9
SHI30132 Sapria himalayana HOM05D004760 ORTHO05D006114 2.3e-29 132.5 118 58.5
C01p34030 Brassica napus HOM05D004760 ORTHO05D006114 3.0e-29 132.1 118 56.8
BolC1t03372H Brassica oleracea HOM05D004760 ORTHO05D006114 3.0e-29 132.1 118 56.8
RcHm_v2.0_Chr4g0444611 Rosa chinensis HOM05D004760 ORTHO05D006114 5.1e-29 131.3 116 64.7
Os09g0549700 Oryza sativa ssp. japonica HOM05D004760 ORTHO05D006114 6.7e-29 131.0 119 57.1
Medtr1g080050 Medicago truncatula HOM05D004760 ORTHO05D006114 1.1e-28 130.2 123 61.0
Actinidia07172 Actinidia chinensis HOM05D004760 ORTHO05D006114 2.0e-28 129.4 106 64.2
FvH4_3g31090 Fragaria vesca HOM05D004760 ORTHO05D006114 2.0e-28 129.4 101 69.3
Ah.15g090630 Amaranthus hybridus HOM05D004760 ORTHO05D006114 2.6e-28 129.0 123 56.1
BcaC09g49679 Brassica carinata HOM05D004760 ORTHO05D006114 2.6e-28 129.0 118 55.9
RcHm_v2.0_Chr5g0057731 Rosa chinensis HOM05D004760 ORTHO05D006114 2.6e-28 129.0 99 71.7
Eucgr.B02540 Eucalyptus grandis HOM05D004760 ORTHO05D006114 4.4e-28 128.3 119 58.0
HanXRQChr14g0432111 Helianthus annuus HOM05D004760 ORTHO05D006114 9.7e-28 127.1 117 59.8
Zm00001eb320920 Zea mays HOM05D004760 ORTHO05D006114 1.3e-27 126.7 119 55.5
PGR102G1962 Punica granatum HOM05D004760 ORTHO05D006114 1.7e-27 126.3 123 57.7
Haze_20543 Corylus avellana HOM05D004760 ORTHO05D006114 2.8e-27 125.6 117 59.0
Nn7g38254 Nelumbo nucifera HOM05D004760 ORTHO05D006114 4.8e-27 124.8 99 68.7
EL10Ac9g22581 Beta vulgaris HOM05D004760 ORTHO05D006114 3.1e-26 122.1 107 61.7
ECA240G4818 Erigeron canadensis HOM05D007880 ORTHO05D003386 1.5e-25 119.8 100 65.0
Peaxi162Scf00351g00053 Petunia axillaris HOM05D004760 ORTHO05D006114 4.2e-23 111.7 89 67.4
Dinv37316 Davidia involucrata HOM05D004760 ORTHO05D006114 7.2e-23 110.9 96 64.6
A01p26650 Brassica napus HOM05D004760 ORTHO05D006114 3.6e-22 108.6 99 59.6
BraA01t02596Z Brassica rapa HOM05D004760 ORTHO05D006114 3.6e-22 108.6 99 59.6
Actinidia13489 Actinidia chinensis HOM05D004760 ORTHO05D006114 8.0e-22 107.5 91 61.5
arahy.Tifrunner.gnm1.ann1.0NB9P2 Arachis hypogaea HOM05D004760 ORTHO05D006114 1.4e-21 106.7 109 53.2
BcaB05g23055 Brassica carinata HOM05D004760 ORTHO05D006114 1.4e-21 106.7 123 52.0
Lalb_Chr02g0155851 Lupinus albus HOM05D004760 ORTHO05D006114 1.4e-21 106.7 117 46.2
Actinidia14009 Actinidia chinensis HOM05D004760 ORTHO05D006114 2.3e-21 105.9 87 67.8
arahy.Tifrunner.gnm1.ann1.JVX2H3 Arachis hypogaea HOM05D004760 ORTHO05D002586 3.0e-21 105.5 112 54.5
ECA238G2603 Erigeron canadensis HOM05D004760 ORTHO05D006114 3.0e-21 105.5 103 54.4
Ca_06514_v3 Cicer arietinum L. HOM05D004760 ORTHO05D006114 5.2e-21 104.8 99 59.6
ATR0152G025 Amborella trichopoda HOM05D004760 ORTHO05D006114 2.6e-20 102.4 108 52.8
SEGI_39147 Sequoiadendron giganteum HOM05D004760 ORTHO05D006114 7.4e-20 100.9 117 49.6
QL11p023169 Quercus lobata HOM05D004760 ORTHO05D006114 1.3e-19 100.1 70 70.0
arahy.Tifrunner.gnm1.ann1.PKX4UH Arachis hypogaea HOM05D004760 ORTHO05D006114 1.7e-19 99.8 98 57.1
Medtr1g063230 Medicago truncatula HOM05D004760 ORTHO05D006114 2.2e-19 99.4 118 45.8
TPR.G11257 Trifolium pratense HOM05D004760 ORTHO05D006114 9.1e-18 94.0 117 43.6
Hund12449 Selenicereus undatus HOM05D004760 ORTHO05D006114 2.6e-17 92.4 90 57.8
CsaV3_6G014220 Cucumis sativus L. HOM05D004760 ORTHO05D006114 4.5e-17 91.7 126 42.1
VMungo0720G1193 Vigna mungo HOM05D004760 ORTHO05D006114 4.5e-17 91.7 114 43.9
DCAR_008992 Daucus carota HOM05D004760 ORTHO05D006114 7.7e-17 90.9 116 42.2
Psat6g074200 Pisum sativum HOM05D004760 ORTHO05D006114 7.7e-17 90.9 117 43.6
arahy.Tifrunner.gnm1.ann1.B7429M Arachis hypogaea HOM05D004760 ORTHO05D000042 1.0e-16 90.5 129 48.1
Sc20g0005490 Simmondsia chinensis HOM05D004760 ORTHO05D006114 1.0e-16 90.5 116 46.6
SHI02979 Sapria himalayana HOM05D004760 ORTHO05D006114 2.2e-16 89.4 89 51.7
Glyma.10G055400 Glycine max HOM05D004760 ORTHO05D006114 3.8e-16 88.6 118 42.4
arahy.Tifrunner.gnm1.ann1.P1K6TB Arachis hypogaea HOM05D004760 ORTHO05D006114 1.1e-15 87.0 86 58.1
EL10Ac7g16630 Beta vulgaris HOM05D004760 ORTHO05D039006 1.9e-15 86.3 134 39.6
Solyc11g069080.3 Solanum lycopersicum HOM05D004760 ORTHO05D006114 1.9e-15 86.3 65 67.7
Lj5g0000803 Lotus japonicus HOM05D004760 ORTHO05D006114 2.5e-15 85.9 118 44.9
Phvul.007G219200 Phaseolus vulgaris HOM05D004760 ORTHO05D006114 3.2e-15 85.5 119 40.3
AUR62040351 Chenopodium quinoa HOM05D004760 ORTHO05D039006 1.4e-13 80.1 123 37.4
Ca_11503_v3 Cicer arietinum L. HOM05D004760 ORTHO05D006114 8.8e-13 77.4 102 43.1
MELO3C026909.2 Cucumis melo HOM05D004760 ORTHO05D006114 3.7e-11 72.0 77 58.4
ECA233G6109 Erigeron canadensis HOM05D000473 ORTHO05D001219 5.9e-09 64.7 61 59.0
Nn7g38187 Nelumbo nucifera HOM05D004760 ORTHO05D006114 9.4e-07 57.4 69 50.7
vmacro19695 Vaccinium macrocarpon HOM05D004009 ORTHO05D004617 1.6e-06 56.6 108 33.3
Mapoly0031s0031 Marchantia polymorpha HOM05D004009 ORTHO05D004617 2.1e-06 56.2 109 33.9
Lalb_Chr02g0155971 Lupinus albus HOM05D004760 ORTHO05D006114 2.7e-06 55.8 55 45.5
Glyma.02G307100 Glycine max HOM05D004009 ORTHO05D004617 3.6e-06 55.5 109 32.1
Hma1.2p1_0472F.1_g159660 Hydrangea macrophylla HOM05D004009 ORTHO05D004617 3.6e-06 55.5 109 33.9
Nn5g27800 Nelumbo nucifera HOM05D004009 ORTHO05D004617 3.6e-06 55.5 109 32.1
PGR004G0595 Punica granatum HOM05D004009 ORTHO05D004617 3.6e-06 55.5 109 31.2
Zm00001eb088470 Zea mays HOM05D004009 ORTHO05D004617 3.6e-06 55.5 109 32.1
ClCG11G000240 Citrullus lanatus HOM05D004009 ORTHO05D004617 6.1e-06 54.7 109 31.2
Manes.08G116611 Manihot esculenta HOM05D004009 ORTHO05D004617 6.1e-06 54.7 109 33.0
Glyma.14G006000 Glycine max HOM05D004009 ORTHO05D004617 8.0e-06 54.3 109 31.2
Os01g0256600 Oryza sativa ssp. japonica HOM05D004009 ORTHO05D004617 8.0e-06 54.3 109 34.9


User provided reference genes

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