Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO801G0566 Papaver somniferum HOM05D003877 ORTHO05D004647 6.7e-287 989.9 489 100.0
PSO339G0345 Papaver somniferum HOM05D003877 ORTHO05D004647 1.9e-265 918.7 483 94.4
Aqoxy2G01450 Aquilegia oxysepala HOM05D003877 ORTHO05D004647 1.6e-203 713.0 474 71.1
TAR633G0464 Trochodendron aralioides HOM05D003877 ORTHO05D004647 8.7e-202 707.2 475 69.7
Aqoxy1G01313 Aquilegia oxysepala HOM05D003877 ORTHO05D004647 5.6e-201 704.5 450 72.2
TAR623G0028 Trochodendron aralioides HOM05D003877 ORTHO05D004647 1.1e-199 700.3 469 70.4
Nn7g35848 Nelumbo nucifera HOM05D003877 ORTHO05D004647 3.4e-198 695.3 468 69.0
Manes.10G009000 Manihot esculenta HOM05D003877 ORTHO05D004647 1.9e-196 689.5 465 70.3
TWI73G0349 Tripterygium wilfordii HOM05D003877 ORTHO05D004647 6.0e-195 684.5 453 69.5
Cpa.g.sc19.135 Carica papaya HOM05D003877 ORTHO05D004647 3.9e-194 681.8 451 70.1
Duzib106G1591 Durio zibethinus HOM05D003877 ORTHO05D004647 2.5e-193 679.1 466 67.4
Potri.010G184600 Populus trichocarpa HOM05D003877 ORTHO05D004647 5.6e-193 677.9 462 69.0
TWI09G1304 Tripterygium wilfordii HOM05D003877 ORTHO05D004647 5.6e-193 677.9 471 67.3
Thecc.10G011300 Theobroma cacao HOM05D003877 ORTHO05D004647 1.3e-192 676.8 469 66.7
Gohir.A06G161800 Gossypium hirsutum HOM05D003877 ORTHO05D004647 1.6e-192 676.4 474 65.6
Ca_15152_v3 Cicer arietinum L. HOM05D003877 ORTHO05D004647 2.1e-192 676.0 467 69.0
Dinv10589 Davidia involucrata HOM05D003877 ORTHO05D004647 2.1e-192 676.0 463 68.3
QL08p063706 Quercus lobata HOM05D003877 ORTHO05D004647 1.1e-191 673.7 463 68.9
Glyma.18G024700 Glycine max HOM05D003877 ORTHO05D004647 1.4e-191 673.3 463 69.5
Manes.07G134500 Manihot esculenta HOM05D003877 ORTHO05D004647 1.4e-191 673.3 467 67.5
Gorai.010G195300 Gossypium raimondii HOM05D003877 ORTHO05D004647 1.8e-191 672.9 474 65.2
Medtr3g071580 Medicago truncatula HOM05D003877 ORTHO05D004647 6.9e-191 671.0 469 69.5
GSVIVG01032757001 Vitis vinifera HOM05D003877 ORTHO05D004647 1.5e-190 669.8 447 70.0
GSVIVG01032758001 Vitis vinifera HOM05D003877 ORTHO05D004647 2.0e-190 669.5 454 68.7
Ciclev10031326m.g Citrus clementina HOM05D003877 ORTHO05D004647 2.6e-190 669.1 460 67.6
Potri.008G072600 Populus trichocarpa HOM05D003877 ORTHO05D004647 2.6e-190 669.1 464 69.0
Gohir.D06G167400 Gossypium hirsutum HOM05D003877 ORTHO05D004647 4.5e-190 668.3 474 65.0
Phvul.006G048800 Phaseolus vulgaris HOM05D003877 ORTHO05D004647 5.8e-190 667.9 476 67.9
Lj6g0018000 Lotus japonicus HOM05D003877 ORTHO05D004647 1.0e-189 667.2 466 68.7
CSS0042673 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 1.3e-189 666.8 473 66.6
VMungo0540G0037 Vigna mungo HOM05D003877 ORTHO05D004647 1.3e-189 666.8 450 69.8
Glyma.05G080100 Glycine max HOM05D003877 ORTHO05D004647 1.7e-189 666.4 464 69.6
CANSAT56G2949 Cannabis sativa HOM05D003877 ORTHO05D004647 2.9e-189 665.6 466 66.7
CiPaw.02G195400 Carya illinoinensis HOM05D003877 ORTHO05D004647 4.9e-189 664.8 465 68.4
arahy.Tifrunner.gnm1.ann1.EHZF9M Arachis hypogaea HOM05D003877 ORTHO05D004647 1.1e-188 663.7 471 66.7
PGR142G4288 Punica granatum HOM05D003877 ORTHO05D004647 1.1e-188 663.7 466 67.4
CDE04G1002 Ceratophyllum demersum HOM05D003877 ORTHO05D004647 5.5e-188 661.4 463 67.8
MD01G1157500 Malus domestica HOM05D003877 ORTHO05D004647 5.5e-188 661.4 447 69.1
vmacro17690 Vaccinium macrocarpon HOM05D003877 ORTHO05D004647 5.5e-188 661.4 453 68.4
Actinidia29719 Actinidia chinensis HOM05D003877 ORTHO05D004647 4.6e-187 658.3 461 67.0
arahy.Tifrunner.gnm1.ann1.ZCM4RK Arachis hypogaea HOM05D003877 ORTHO05D004647 7.9e-187 657.5 476 66.0
arahy.Tifrunner.gnm1.ann1.EJG72V Arachis hypogaea HOM05D003877 ORTHO05D004647 1.0e-186 657.1 476 65.5
ATR0068G102 Amborella trichopoda HOM05D003877 ORTHO05D004647 1.3e-186 656.8 478 64.2
Haze_17269 Corylus avellana HOM05D003877 ORTHO05D004647 3.0e-186 655.6 433 70.4
PGSC0003DMG400030038 Solanum tuberosum HOM05D003877 ORTHO05D004647 8.7e-186 654.1 459 66.7
RcHm_v2.0_Chr1g0370931 Rosa chinensis HOM05D003877 ORTHO05D004647 1.5e-185 653.3 478 64.6
Solyc06g050990.3 Solanum lycopersicum HOM05D003877 ORTHO05D004647 1.9e-185 652.9 470 66.0
Gorai.012G079000 Gossypium raimondii HOM05D003877 ORTHO05D004647 2.5e-185 652.5 464 64.9
Sabra10G0141800 Salix brachista HOM05D003877 ORTHO05D004647 2.5e-185 652.5 495 63.6
Lalb_Chr08g0231521 Lupinus albus HOM05D003877 ORTHO05D004647 3.3e-185 652.1 450 68.7
Rhsim03G0146600 Rhododendron simsii HOM05D003877 ORTHO05D004647 3.3e-185 652.1 467 65.7
FAN01G0819 Fragaria x ananassa HOM05D003877 ORTHO05D004647 4.3e-185 651.7 472 63.8
FAN10G2809 Fragaria x ananassa HOM05D003877 ORTHO05D004647 4.3e-185 651.7 472 63.8
Gohir.D04G070400 Gossypium hirsutum HOM05D003877 ORTHO05D004647 4.3e-185 651.7 464 64.4
Peaxi162Scf00284g00528 Petunia axillaris HOM05D003877 ORTHO05D004647 5.7e-185 651.4 451 67.2
FAN06G1542 Fragaria x ananassa HOM05D003877 ORTHO05D004647 1.6e-184 649.8 467 64.5
FvH4_7g25060 Fragaria vesca HOM05D003877 ORTHO05D004647 2.8e-184 649.0 467 64.2
Lalb_Chr23g0277091 Lupinus albus HOM05D003877 ORTHO05D004647 3.7e-184 648.7 446 68.8
Hund13891 Selenicereus undatus HOM05D003877 ORTHO05D004647 3.7e-184 648.7 469 65.5
Sopen06g016790 Solanum pennellii HOM05D003877 ORTHO05D004647 6.2e-184 647.9 470 65.5
FAN03G0426 Fragaria x ananassa HOM05D003877 ORTHO05D004647 1.1e-183 647.1 467 64.0
Nitab4.5_0003391g0120 Nicotiana tabacum HOM05D003877 ORTHO05D004647 1.4e-183 646.7 474 64.6
Sc11g0005270 Simmondsia chinensis HOM05D003877 ORTHO05D004647 9.0e-183 644.0 466 65.0
Eucgr.G03086 Eucalyptus grandis HOM05D003877 ORTHO05D004647 2.0e-182 642.9 471 63.5
AUR62022935 Chenopodium quinoa HOM05D003877 ORTHO05D004647 4.5e-182 641.7 467 65.1
Nitab4.5_0000789g0120 Nicotiana tabacum HOM05D003877 ORTHO05D004647 4.5e-182 641.7 469 64.6
Lj1C785G15 Lonicera japonica HOM05D003877 ORTHO05D004647 5.8e-182 641.3 471 62.2
Lsat_1_v5_gn_9_123441 Lactuca sativa HOM05D003877 ORTHO05D004647 1.7e-181 639.8 478 61.9
Prupe.2G255400 Prunus persica HOM05D003877 ORTHO05D004647 2.2e-181 639.4 447 67.1
Sopen05g031010 Solanum pennellii HOM05D003877 ORTHO05D004647 2.2e-181 639.4 462 64.7
DCAR_011841 Daucus carota HOM05D003877 ORTHO05D004647 6.5e-181 637.9 449 65.9
PSO349G0168 Papaver somniferum HOM05D003877 ORTHO05D004647 6.5e-181 637.9 449 67.7
CAN.G1268.9 Capsicum annuum HOM05D003877 ORTHO05D004647 8.4e-181 637.5 467 63.2
Carub.0001s0925 Capsella rubella HOM05D003877 ORTHO05D004647 1.1e-180 637.1 463 63.5
Cc02_g06060 Coffea canephora HOM05D003877 ORTHO05D004647 9.3e-180 634.0 496 60.9
HanXRQChr08g0221971 Helianthus annuus HOM05D003877 ORTHO05D004647 9.3e-180 634.0 471 63.3
Sp1g08500 Schrenkiella parvula HOM05D003877 ORTHO05D004647 1.2e-179 633.6 476 62.2
AL1G20470 Arabidopsis lyrata HOM05D003877 ORTHO05D004647 1.6e-179 633.3 461 63.3
AUR62012296 Chenopodium quinoa HOM05D003877 ORTHO05D004647 1.6e-179 633.3 462 65.2
Hund15887 Selenicereus undatus HOM05D003877 ORTHO05D004647 3.5e-179 632.1 463 64.8
Nitab4.5_0005049g0030 Nicotiana tabacum HOM05D003877 ORTHO05D004647 4.6e-179 631.7 486 63.0
CARHR009900 Cardamine hirsuta HOM05D003877 ORTHO05D004647 7.9e-179 630.9 476 62.4
EL10Ac2g04887 Beta vulgaris HOM05D003877 ORTHO05D004647 1.3e-178 630.2 475 64.6
ECA233G0637 Erigeron canadensis HOM05D003877 ORTHO05D004647 3.9e-178 628.6 460 63.5
Peaxi162Scf01149g00319 Petunia axillaris HOM05D003877 ORTHO05D004647 6.7e-178 627.9 433 66.5
THA.LOC104824338 Tarenaya hassleriana HOM05D003877 ORTHO05D004647 8.7e-178 627.5 466 63.3
AT1G09870 Arabidopsis thaliana HOM05D003877 ORTHO05D004647 1.1e-177 627.1 461 62.7
Nitab4.5_0000058g0130 Nicotiana tabacum HOM05D003877 ORTHO05D004647 1.1e-177 627.1 484 63.0
THA.LOC104810121 Tarenaya hassleriana HOM05D003877 ORTHO05D004647 2.5e-177 625.9 462 63.6
Sabra08G0053900 Salix brachista HOM05D003877 ORTHO05D004647 9.7e-177 624.0 517 60.0
SGA_v2.0_scaffold2G01375 Striga asiatica HOM05D003877 ORTHO05D004647 3.7e-176 622.1 453 64.9
Gohir.A05G331800 Gossypium hirsutum HOM05D003877 ORTHO05D004647 6.3e-176 621.3 464 62.7
Zm00001eb062330 Zea mays HOM05D003877 ORTHO05D004647 1.4e-175 620.2 481 63.2
Os03g0818100 Oryza sativa ssp. japonica HOM05D003877 ORTHO05D004647 2.4e-175 619.4 460 64.6
BcaC07g41857 Brassica carinata HOM05D003877 ORTHO05D004647 5.3e-175 618.2 469 61.4
C08p49240 Brassica napus HOM05D003877 ORTHO05D004647 5.3e-175 618.2 469 61.4
BolC8t52459H Brassica oleracea HOM05D003877 ORTHO05D004647 5.3e-175 618.2 469 61.4
MSTRG.8927 Avicennia marina HOM05D003877 ORTHO05D004647 1.5e-174 616.7 457 62.1
Thhalv10007485m.g Eutrema salsugineum HOM05D003877 ORTHO05D004647 1.5e-174 616.7 462 61.7
BraA06t23872Z Brassica rapa HOM05D003877 ORTHO05D004647 2.0e-174 616.3 469 61.2
BraA09t41875Z Brassica rapa HOM05D003877 ORTHO05D004647 1.3e-173 613.6 464 61.2
Migut.F00639 Erythranthe guttata HOM05D003877 ORTHO05D004647 1.7e-173 613.2 461 63.3
Sed0008918 Sechium edule HOM05D003877 ORTHO05D004647 1.7e-173 613.2 463 62.0
A09p65300 Brassica napus HOM05D003877 ORTHO05D004647 2.2e-173 612.8 464 61.2
Aa31LG1G5020 Aethionema arabicum HOM05D003877 ORTHO05D004647 3.8e-173 612.1 464 61.6
BolC5t29551H Brassica oleracea HOM05D003877 ORTHO05D004647 3.8e-173 612.1 466 60.7
CSS0004354 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 5.0e-173 611.7 412 68.7
Dinv21772 Davidia involucrata HOM05D003877 ORTHO05D004647 5.0e-173 611.7 425 66.8
C05p07990 Brassica napus HOM05D003877 ORTHO05D004647 1.4e-172 610.1 466 60.7
ATR0681G014 Amborella trichopoda HOM05D003877 ORTHO05D004647 3.2e-172 609.0 431 67.1
A06p06580 Brassica napus HOM05D003877 ORTHO05D004647 3.2e-172 609.0 469 60.8
BcaC05g24837 Brassica carinata HOM05D003877 ORTHO05D004647 3.6e-171 605.5 466 60.1
vmacro10004 Vaccinium macrocarpon HOM05D003877 ORTHO05D004647 1.0e-170 604.0 561 53.8
SGA_v2.0_scaffold85G26692 Striga asiatica HOM05D003877 ORTHO05D004647 5.1e-170 601.7 474 60.5
SGA_v2.0_scaffold60G20966 Striga asiatica HOM05D003877 ORTHO05D004647 3.3e-169 599.0 489 58.7
CsaV3_5G010390 Cucumis sativus L. HOM05D003877 ORTHO05D004647 4.3e-169 598.6 446 63.7
Oeu056656.1 Olea europaea HOM05D003877 ORTHO05D004647 9.7e-169 597.4 470 60.0
MELO3C018375.2 Cucumis melo HOM05D003877 ORTHO05D004647 1.7e-168 596.7 469 61.2
Psat5g130920 Pisum sativum HOM05D003877 ORTHO05D004647 4.8e-168 595.1 471 61.8
vmacro17691 Vaccinium macrocarpon HOM05D003877 ORTHO05D004647 1.2e-166 590.5 484 60.1
CSS0044757 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 5.9e-166 588.2 388 69.3
Ah.10g036260 Amaranthus hybridus HOM05D003877 ORTHO05D004647 7.7e-166 587.8 559 54.0
PGSC0003DMG400027120 Solanum tuberosum HOM05D003877 ORTHO05D004647 7.7e-166 587.8 431 63.8
CSS0043221 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 1.7e-165 586.6 388 69.1
ClCG07G004500 Citrullus lanatus HOM05D003877 ORTHO05D004647 5.0e-165 585.1 426 63.8
Sed0009338 Sechium edule HOM05D003877 ORTHO05D004647 1.1e-161 573.9 451 61.4
Lsat_1_v5_gn_9_60880 Lactuca sativa HOM05D003877 ORTHO05D004647 7.0e-159 564.7 445 60.7
Thhalv10002208m.g Eutrema salsugineum HOM05D003877 ORTHO05D004647 2.0e-158 563.1 404 63.1
Prupe.6G130900 Prunus persica HOM05D003877 ORTHO05D004647 1.0e-157 560.8 447 60.9
SalBow3G1521 Salvia bowleyana HOM05D003877 ORTHO05D004647 2.7e-155 552.7 598 48.5
CsaV3_5G010430 Cucumis sativus L. HOM05D003877 ORTHO05D004647 6.7e-154 548.1 472 58.5
MELO3C034227.2 Cucumis melo HOM05D003877 ORTHO05D004647 2.6e-153 546.2 466 57.9
Atru.chr12.96 Acer truncatum HOM05D003877 ORTHO05D004647 1.7e-152 543.5 427 61.4
CDE06G2086 Ceratophyllum demersum HOM05D003877 ORTHO05D004647 3.4e-145 519.2 441 59.2
CsaV3_5G010400 Cucumis sativus L. HOM05D003877 ORTHO05D004647 1.4e-138 497.3 468 53.4
Mapoly0029s0098 Marchantia polymorpha HOM05D003877 ORTHO05D004647 3.5e-134 482.6 475 49.3
unitig_16.g32857 Utricularia gibba HOM05D003877 ORTHO05D004647 5.0e-133 478.8 490 49.8
Pp3c24_6790 Physcomitrium patens HOM05D003877 ORTHO05D004647 8.9e-130 468.0 475 48.6
CSS0003433 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 2.6e-129 466.5 368 60.9
SMO271G0017 Selaginella moellendorffii HOM05D003877 ORTHO05D004647 4.9e-128 462.2 452 50.9
Solyc05g052480.4 Solanum lycopersicum HOM05D003877 ORTHO05D004647 5.0e-125 452.2 337 65.0
Pp3c8_15050 Physcomitrium patens HOM05D003877 ORTHO05D004647 2.9e-120 436.4 405 51.4
HPP92_019712 Vanilla planifolia HOM05D003877 ORTHO05D004647 8.1e-115 418.3 302 66.9
AagrBONN_evm.TU.Sc2ySwM_344.2788 Anthoceros agrestis HOM05D003877 ORTHO05D004647 3.2e-111 406.4 508 44.3
SalBow3G0419 Salvia bowleyana HOM05D003877 ORTHO05D004647 7.1e-95 352.1 264 64.4
unitig_8.g4098 Utricularia gibba HOM05D003877 ORTHO05D004647 6.7e-77 292.4 297 49.5
SalBow3G3178 Salvia bowleyana HOM05D003877 ORTHO05D004647 2.3e-69 267.3 176 67.0
CsaV3_2G012250 Cucumis sativus L. HOM05D003877 ORTHO05D004647 1.1e-63 248.4 189 60.8
SGA_v2.0_scaffold85G26702 Striga asiatica HOM05D003877 ORTHO05D004647 1.5e-49 201.4 218 48.6
SEGI_29662 Sequoiadendron giganteum HOM05D003877 ORTHO05D004647 1.7e-48 198.0 159 59.7
Manes.09G077219 Manihot esculenta HOM05D003877 ORTHO05D004647 3.8e-40 170.2 100 78.0
CBR_g38028 Chara braunii HOM05D003877 ORTHO05D004647 9.4e-39 165.6 319 32.3
TPR.G10202 Trifolium pratense HOM05D003877 ORTHO05D004647 6.1e-38 162.9 110 68.2
Cre13.g568600 Chlamydomonas reinhardtii HOM05D003877 ORTHO05D004647 8.0e-38 162.5 440 30.5
TAR626G1532 Trochodendron aralioides HOM05D003877 ORTHO05D004647 9.1e-34 149.1 149 53.0
Lsat_1_v5_gn_5_175980 Lactuca sativa HOM05D003877 ORTHO05D004647 2.7e-30 137.5 110 60.0
Manes.18G042850 Manihot esculenta HOM05D003877 ORTHO05D004647 3.6e-30 137.1 108 64.8
Manes.06G044901 Manihot esculenta HOM05D003877 ORTHO05D004647 6.1e-30 136.3 108 64.8
SEGI_27537 Sequoiadendron giganteum HOM05D003877 ORTHO05D004647 4.5e-25 120.2 78 66.7
CsaV3_2G012240 Cucumis sativus L. HOM05D003877 ORTHO05D004647 5.9e-25 119.8 86 65.1
unitig_8.g4097 Utricularia gibba HOM05D003877 ORTHO05D004647 6.1e-22 109.8 103 51.5
Nn5g28638 Nelumbo nucifera HOM05D003877 ORTHO05D004647 3.0e-21 107.5 71 62.0
TPR.G5082 Trifolium pratense HOM05D003877 ORTHO05D004647 3.7e-19 100.5 70 61.4
Nn7g36267 Nelumbo nucifera HOM05D003877 ORTHO05D004647 4.9e-19 100.1 60 68.3
CSS0015783 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 7.0e-18 96.3 110 50.9
Carub.0003s0920 Capsella rubella HOM05D000468 ORTHO05D114682 5.0e-16 90.1 67 67.2
Manes.15G188901 Manihot esculenta HOM05D003877 ORTHO05D004647 3.7e-11 73.9 47 70.2
MELO3C018376.2 Cucumis melo HOM05D003877 ORTHO05D004647 1.6e-09 68.6 45 66.7
MELO3C033083.2 Cucumis melo HOM05D003877 ORTHO05D034944 6.6e-08 63.2 39 71.8
TPR.G5048 Trifolium pratense HOM05D003877 ORTHO05D004647 1.1e-07 62.4 48 58.3
TPR.G30156 Trifolium pratense HOM05D003877 ORTHO05D004647 1.2e-06 58.9 89 41.6
PSO063G3403 Papaver somniferum HOM05D000240 ORTHO05D002721 1.6e-06 58.5 59 44.1
PSO017G6761 Papaver somniferum HOM05D000240 ORTHO05D004647 6.2e-06 56.6 59 40.7


User provided reference genes

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