Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO801G0534 Papaver somniferum HOM05D007506 ORTHO05D008409 8.3e-36 153.3 84 100.0
PSO339G4482 Papaver somniferum HOM05D007506 ORTHO05D008409 9.2e-35 149.8 84 97.6
CiPaw.14G033800 Carya illinoinensis HOM05D007506 ORTHO05D008409 2.4e-11 72.0 63 66.7
Glyma.10G277900 Glycine max HOM05D007506 ORTHO05D008409 2.4e-11 72.0 84 56.0
Nn6g34869 Nelumbo nucifera HOM05D007506 ORTHO05D008409 5.4e-11 70.9 54 63.0
TAR633G2594 Trochodendron aralioides HOM05D007506 ORTHO05D008409 1.6e-10 69.3 62 58.1
Aqoxy7G00781 Aquilegia oxysepala HOM05D007506 ORTHO05D008409 3.5e-10 68.2 63 60.3
CDE07G1652 Ceratophyllum demersum HOM05D057737 ORTHO05D008409 7.8e-10 67.0 80 48.8
GSVIVG01010679001 Vitis vinifera HOM05D007506 ORTHO05D008409 1.3e-09 66.2 46 69.6
RcHm_v2.0_Chr1g0331731 Rosa chinensis HOM05D007506 ORTHO05D008409 1.7e-09 65.9 87 50.6
THA.LOC104816468 Tarenaya hassleriana HOM05D012863 ORTHO05D008409 2.3e-09 65.5 93 47.3
Manes.07G086800 Manihot esculenta HOM05D007506 ORTHO05D008409 3.0e-09 65.1 59 61.0
Haze_03301 Corylus avellana HOM05D007506 ORTHO05D008409 3.9e-09 64.7 67 58.2
Ciclev10017346m.g Citrus clementina HOM05D007506 ORTHO05D008409 5.1e-09 64.3 59 59.3
Zm00001eb242800 Zea mays HOM05D007506 ORTHO05D008409 6.6e-09 63.9 64 62.5
TAR636G0277 Trochodendron aralioides HOM05D007506 ORTHO05D008409 1.1e-08 63.2 54 68.5
PGR142G2547 Punica granatum HOM05D007506 ORTHO05D008409 1.5e-08 62.8 83 50.6
VMungo0720G0153 Vigna mungo HOM05D007506 ORTHO05D008409 1.5e-08 62.8 87 51.7
Peaxi162Scf00519g00621 Petunia axillaris HOM05D007506 ORTHO05D008409 1.9e-08 62.4 55 60.0
Aqoxy7G00782 Aquilegia oxysepala HOM05D007506 ORTHO05D008409 2.5e-08 62.0 62 56.5
Hund06790 Selenicereus undatus HOM05D007506 ORTHO05D008409 2.5e-08 62.0 82 51.2
CDE12G0642 Ceratophyllum demersum HOM05D007506 ORTHO05D008409 5.6e-08 60.8 60 53.3
Dinv12843 Davidia involucrata HOM05D007506 ORTHO05D008409 5.6e-08 60.8 64 56.2
AL6G14410 Arabidopsis lyrata HOM05D012863 ORTHO05D008409 7.3e-08 60.5 75 54.7
Migut.F00865 Erythranthe guttata HOM05D007506 ORTHO05D008409 7.3e-08 60.5 64 53.1
Hma1.2p1_0756F.1_g213210 Hydrangea macrophylla HOM05D007506 ORTHO05D008409 9.6e-08 60.1 58 62.1
Hma1.2p1_0756F.1_g213215 Hydrangea macrophylla HOM05D007506 ORTHO05D008409 9.6e-08 60.1 58 62.1
Hma1.2p1_1491F.1_g286710 Hydrangea macrophylla HOM05D007506 ORTHO05D008409 9.6e-08 60.1 58 62.1
Atru.chr12.1049 Acer truncatum HOM05D007506 ORTHO05D008409 1.2e-07 59.7 58 56.9
Cc02_g09560 Coffea canephora HOM05D007506 ORTHO05D008409 2.1e-07 58.9 63 55.6
FvH4_7g05151 Fragaria vesca HOM05D007506 ORTHO05D008409 2.1e-07 58.9 58 58.6
FAN05G5073 Fragaria x ananassa HOM05D007506 ORTHO05D008409 2.8e-07 58.5 58 60.3
Nitab4.5_0002586g0040 Nicotiana tabacum HOM05D007506 ORTHO05D008409 2.8e-07 58.5 80 45.0
Potri.008G016801 Populus trichocarpa HOM05D007506 ORTHO05D008409 2.8e-07 58.5 63 55.6
Sabra08G0010500 Salix brachista HOM05D007506 ORTHO05D008409 2.8e-07 58.5 63 55.6
Manes.10G062500 Manihot esculenta HOM05D007506 ORTHO05D008409 4.7e-07 57.8 65 55.4
Phvul.007G023500 Phaseolus vulgaris HOM05D007506 ORTHO05D008409 4.7e-07 57.8 87 49.4
SEGI_39886 Sequoiadendron giganteum HOM05D007506 ORTHO05D008409 4.7e-07 57.8 47 59.6
CSS0050385 Camellia sinensis var. sinensis HOM05D007506 ORTHO05D008409 6.2e-07 57.4 55 54.5
CARHR208540 Cardamine hirsuta HOM05D012863 ORTHO05D008409 6.2e-07 57.4 83 47.0
vmacro10310 Vaccinium macrocarpon HOM05D007506 ORTHO05D008409 6.2e-07 57.4 53 60.4
MBI17_g08330_MAGBIO Magnolia biondii HOM05D007506 ORTHO05D008409 8.1e-07 57.0 81 49.4
FAN28G2052 Fragaria x ananassa HOM05D007506 ORTHO05D008409 1.1e-06 56.6 58 60.3
Glyma.20G110900 Glycine max HOM05D007506 ORTHO05D008409 1.1e-06 56.6 87 50.6
THA.LOC109117254 Tarenaya hassleriana HOM05D012863 ORTHO05D008409 1.1e-06 56.6 93 43.0
FAN08G2571 Fragaria x ananassa HOM05D007506 ORTHO05D008409 1.4e-06 56.2 53 60.4
Duzib106G0675 Durio zibethinus HOM05D007506 ORTHO05D008409 1.8e-06 55.8 64 53.1
Thecc.10G114000 Theobroma cacao HOM05D007506 ORTHO05D008409 1.8e-06 55.8 62 53.2
TPR.G2499 Trifolium pratense HOM05D007506 ORTHO05D008409 2.4e-06 55.5 74 50.0
Carub.0006s0364 Capsella rubella HOM05D012863 ORTHO05D008409 3.1e-06 55.1 76 51.3
FAN03G1835 Fragaria x ananassa HOM05D007506 ORTHO05D008409 3.1e-06 55.1 58 58.6
QL04p046828 Quercus lobata HOM05D007506 ORTHO05D008409 4.0e-06 54.7 84 48.8
Sp6g38070 Schrenkiella parvula HOM05D012863 ORTHO05D008409 4.0e-06 54.7 83 47.0
Cpa.g.sc54.9 Carica papaya HOM05D007506 ORTHO05D008409 5.2e-06 54.3 53 56.6
Potri.010G240401 Populus trichocarpa HOM05D007506 ORTHO05D008409 5.2e-06 54.3 85 48.2
Medtr1g111840 Medicago truncatula HOM05D007506 ORTHO05D008409 6.9e-06 53.9 83 43.4
TWI38G1985 Tripterygium wilfordii HOM05D007506 ORTHO05D008409 6.9e-06 53.9 53 54.7
Zm00001eb252110 Zea mays HOM05D000188 ORTHO05D003976 9.0e-06 53.5 79 45.6


User provided reference genes

Program Settings