Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO801G0259 Papaver somniferum HOM05D007330 ORTHO05D009368 1.9e-72 275.8 141 100.0
PSO339G1528 Papaver somniferum HOM05D007330 ORTHO05D009368 4.9e-65 251.1 160 84.4
TAR636G1893 Trochodendron aralioides HOM05D007330 ORTHO05D009368 1.9e-37 159.5 164 57.3
Manes.11G150100 Manihot esculenta HOM05D007330 ORTHO05D009368 1.6e-36 156.4 162 53.7
Thecc.09G347600 Theobroma cacao HOM05D007330 ORTHO05D009368 3.7e-36 155.2 163 54.6
COL.COLO4_34706 Corchorus olitorius HOM05D007330 ORTHO05D009368 6.3e-36 154.5 125 63.2
Ciclev10029423m.g Citrus clementina HOM05D007330 ORTHO05D009368 1.4e-35 153.3 162 56.2
CSS0040476 Camellia sinensis var. sinensis HOM05D007330 ORTHO05D009368 1.8e-35 152.9 163 53.4
Nn2g13766 Nelumbo nucifera HOM05D007330 ORTHO05D009368 1.2e-34 150.2 125 61.6
MELO3C004968.2 Cucumis melo HOM05D007330 ORTHO05D009368 3.4e-34 148.7 165 53.3
CsaV3_1G013380 Cucumis sativus L. HOM05D007330 ORTHO05D009368 3.4e-34 148.7 165 53.3
ClCG03G002650 Citrullus lanatus HOM05D007330 ORTHO05D009368 4.5e-34 148.3 164 54.9
Gohir.A05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 4.5e-34 148.3 163 52.8
PGR119G1592 Punica granatum HOM05D007330 ORTHO05D009368 7.6e-34 147.5 120 63.3
Sed0025524 Sechium edule HOM05D007330 ORTHO05D009368 7.6e-34 147.5 164 51.8
Gohir.D05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 1.0e-33 147.1 163 52.1
CiPaw.13G117900 Carya illinoinensis HOM05D007330 ORTHO05D009368 2.2e-33 146.0 154 54.5
CANSAT35G1795 Cannabis sativa HOM05D007330 ORTHO05D009368 5.0e-33 144.8 130 59.2
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 8.5e-33 144.1 128 55.5
RcHm_v2.0_Chr5g0057841 Rosa chinensis HOM05D007330 ORTHO05D009368 1.4e-32 143.3 131 58.0
FAN21G2017 Fragaria x ananassa HOM05D007330 ORTHO05D009368 2.5e-32 142.5 141 53.9
Migut.N02576 Erythranthe guttata HOM05D007330 ORTHO05D009368 3.2e-32 142.1 161 52.8
Eucgr.J00897 Eucalyptus grandis HOM05D007330 ORTHO05D009368 3.2e-32 142.1 119 63.0
FvH4_3g31190 Fragaria vesca HOM05D007330 ORTHO05D009368 4.2e-32 141.7 131 55.7
FAN11G3216 Fragaria x ananassa HOM05D007330 ORTHO05D009368 4.2e-32 141.7 131 55.7
THA.LOC104814822 Tarenaya hassleriana HOM05D007330 ORTHO05D009368 4.2e-32 141.7 157 52.2
FAN25G0306 Fragaria x ananassa HOM05D007330 ORTHO05D009368 5.5e-32 141.4 131 55.7
Rhsim13G0098500 Rhododendron simsii HOM05D007330 ORTHO05D009368 7.2e-32 141.0 125 58.4
Sp5g16210 Schrenkiella parvula HOM05D007330 ORTHO05D009368 1.6e-31 139.8 163 52.1
Aa31LG4G14100 Aethionema arabicum HOM05D007330 ORTHO05D009368 2.7e-31 139.0 159 52.8
Lsat_1_v5_gn_1_63180 Lactuca sativa HOM05D007330 ORTHO05D009368 2.7e-31 139.0 162 51.9
MSTRG.18683 Avicennia marina HOM05D007330 ORTHO05D009368 3.6e-31 138.7 113 61.9
Glyma.11G195100 Glycine max HOM05D007330 ORTHO05D009368 6.1e-31 137.9 131 55.7
QL01p015978 Quercus lobata HOM05D007330 ORTHO05D009368 7.9e-31 137.5 125 57.6
Carub.0005s1083 Capsella rubella HOM05D007330 ORTHO05D009368 1.0e-30 137.1 157 55.4
Ca_19301_v3 Cicer arietinum L. HOM05D007330 ORTHO05D009368 1.0e-30 137.1 128 54.7
Cc01_g10610 Coffea canephora HOM05D007330 ORTHO05D009368 1.3e-30 136.7 155 51.6
Atru.chr3.3558 Acer truncatum HOM05D007330 ORTHO05D009368 1.8e-30 136.3 158 50.6
Thhalv10002688m.g Eutrema salsugineum HOM05D007330 ORTHO05D009368 2.3e-30 136.0 109 63.3
Actinidia07167 Actinidia chinensis HOM05D007330 ORTHO05D009368 3.9e-30 135.2 161 49.7
A01p26570 Brassica napus HOM05D007330 ORTHO05D009368 3.9e-30 135.2 111 61.3
BraA01t02587Z Brassica rapa HOM05D007330 ORTHO05D009368 3.9e-30 135.2 111 61.3
Glyma.12G079000 Glycine max HOM05D007330 ORTHO05D009368 3.9e-30 135.2 132 53.8
AT3G45050 Arabidopsis thaliana HOM05D007330 ORTHO05D009368 5.1e-30 134.8 122 59.0
CARHR150920 Cardamine hirsuta HOM05D007330 ORTHO05D009368 5.1e-30 134.8 123 56.9
TWI31G1101 Tripterygium wilfordii HOM05D007330 ORTHO05D009368 5.1e-30 134.8 164 50.6
MBI18_g25263_MAGBIO Magnolia biondii HOM05D007330 ORTHO05D009368 6.7e-30 134.4 156 46.2
AL5G23540 Arabidopsis lyrata HOM05D007330 ORTHO05D009368 8.7e-30 134.0 161 51.6
Dinv34698 Davidia involucrata HOM05D007330 ORTHO05D009368 8.7e-30 134.0 160 48.1
Lalb_Chr19g0137021 Lupinus albus HOM05D007330 ORTHO05D009368 8.7e-30 134.0 126 55.6
Nitab4.5_0000567g0040 Nicotiana tabacum HOM05D007330 ORTHO05D009368 8.7e-30 134.0 124 57.3
CAN.G1577.6 Capsicum annuum HOM05D007330 ORTHO05D009368 1.5e-29 133.3 164 48.2
Lj3g0015691 Lotus japonicus HOM05D007330 ORTHO05D009368 1.9e-29 132.9 119 55.5
ECA248G2053 Erigeron canadensis HOM05D007330 ORTHO05D009368 3.3e-29 132.1 124 56.5
Hma1.2p1_0569F.1_g180250 Hydrangea macrophylla HOM05D007330 ORTHO05D009368 3.3e-29 132.1 155 49.0
BcaB05g23421 Brassica carinata HOM05D007330 ORTHO05D009368 4.3e-29 131.7 121 54.5
BcaC09g49699 Brassica carinata HOM05D007330 ORTHO05D009368 4.3e-29 131.7 164 50.6
C01p33810 Brassica napus HOM05D007330 ORTHO05D009368 4.3e-29 131.7 164 50.6
BolC1t03342H Brassica oleracea HOM05D007330 ORTHO05D009368 4.3e-29 131.7 164 50.6
HanXRQChr11g0346411 Helianthus annuus HOM05D007330 ORTHO05D009368 5.7e-29 131.3 115 60.9
SGA_v2.0_scaffold116G32214 Striga asiatica HOM05D007330 ORTHO05D009368 9.7e-29 130.6 82 73.2
Ah.01g003130 Amaranthus hybridus HOM05D007330 ORTHO05D009368 1.3e-28 130.2 157 47.8
MD11G1142300 Malus domestica HOM05D007330 ORTHO05D009368 1.3e-28 130.2 157 49.7
Sc15g0001620 Simmondsia chinensis HOM05D007330 ORTHO05D009368 1.6e-28 129.8 113 55.8
Potri.009G008400 Populus trichocarpa HOM05D007330 ORTHO05D009368 2.2e-28 129.4 131 52.7
GSVIVG01031517001 Vitis vinifera HOM05D000070 ORTHO05D001255 2.2e-28 129.4 160 50.0
Solyc04g007410.4 Solanum lycopersicum HOM05D007330 ORTHO05D009368 2.8e-28 129.0 145 49.7
Sopen04g002470 Solanum pennellii HOM05D007330 ORTHO05D009368 2.8e-28 129.0 145 49.7
vmacro03274 Vaccinium macrocarpon HOM05D007330 ORTHO05D009368 1.1e-27 127.1 99 62.6
Psat4g155560 Pisum sativum HOM05D007330 ORTHO05D009368 2.4e-27 125.9 121 53.7
Medtr4g057845 Medicago truncatula HOM05D007330 ORTHO05D009368 4.1e-27 125.2 124 52.4
Peaxi162Scf00064g00193 Petunia axillaris HOM05D007330 ORTHO05D009368 5.3e-27 124.8 165 45.5
arahy.Tifrunner.gnm1.ann1.V5GM9G Arachis hypogaea HOM05D007330 ORTHO05D009368 1.5e-26 123.2 134 50.0
arahy.Tifrunner.gnm1.ann1.PP0PHB Arachis hypogaea HOM05D007330 ORTHO05D009368 2.0e-26 122.9 121 54.5
DCAR_018785 Daucus carota HOM05D007330 ORTHO05D009368 4.5e-26 121.7 100 60.0
VMungo1127G0312 Vigna mungo HOM05D007330 ORTHO05D009368 5.9e-26 121.3 120 52.5
Phvul.011G083600 Phaseolus vulgaris HOM05D007330 ORTHO05D009368 1.3e-25 120.2 78 67.9
AUR62022766 Chenopodium quinoa HOM05D007330 ORTHO05D009368 1.2e-23 113.6 125 47.2
Os06g0731300 Oryza sativa ssp. japonica HOM05D007330 ORTHO05D009368 7.9e-23 110.9 71 64.8
SEGI_17989 Sequoiadendron giganteum HOM05D007330 ORTHO05D009368 2.3e-22 109.4 116 44.8
Peaxi162Scf00597g00033 Petunia axillaris HOM05D007330 ORTHO05D009368 3.0e-22 109.0 116 52.6
Prupe.6G107600 Prunus persica HOM05D007330 ORTHO05D009368 1.5e-21 106.7 133 50.4
Pp3c18_13360 Physcomitrium patens HOM05D007330 ORTHO05D009368 3.7e-20 102.1 118 45.8
Aqoxy2G01788 Aquilegia oxysepala HOM05D007330 ORTHO05D009368 8.2e-20 100.9 143 46.9
HPP92_007165 Vanilla planifolia HOM05D007330 ORTHO05D009368 8.2e-20 100.9 124 41.9
Gorai.009G110400 Gossypium raimondii HOM05D007330 ORTHO05D009368 4.1e-19 98.6 138 45.7
Sabra09G0004900 Salix brachista HOM05D007330 ORTHO05D009368 6.9e-19 97.8 138 45.7
AagrBONN_evm.TU.Sc2ySwM_228.4164 Anthoceros agrestis HOM05D007330 ORTHO05D009368 4.5e-18 95.1 73 56.2
CBR_g54316 Chara braunii HOM05D007330 ORTHO05D009368 1.3e-17 93.6 75 52.0
MD03G1125100 Malus domestica HOM05D007330 ORTHO05D009368 1.7e-17 93.2 157 39.5
Peaxi162Scf00958g00023 Petunia axillaris HOM05D007330 ORTHO05D009368 2.2e-17 92.8 94 55.3
Nitab4.5_0003325g0010 Nicotiana tabacum HOM05D007330 ORTHO05D009368 5.0e-17 91.7 98 54.1
Cpa.g.sc65.31 Carica papaya HOM05D007330 ORTHO05D009368 1.4e-16 90.1 98 51.0
Lj1A195G28 Lonicera japonica HOM05D007330 ORTHO05D009368 1.4e-16 90.1 156 42.3
PGSC0003DMG400005973 Solanum tuberosum HOM05D007330 ORTHO05D009368 1.4e-16 90.1 92 54.3
Lj1C194T4 Lonicera japonica HOM05D007330 ORTHO05D009368 1.9e-16 89.7 99 51.5
SMO367G0878 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 6.1e-15 84.7 114 39.5
Mapoly0184s0021 Marchantia polymorpha HOM05D007330 ORTHO05D009368 7.9e-15 84.3 71 53.5
SMO275G0064 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 7.9e-15 84.3 130 36.9
Hund08155 Selenicereus undatus HOM05D007330 ORTHO05D009368 1.1e-13 80.5 93 45.2
arahy.Tifrunner.gnm1.ann1.N36MJA Arachis hypogaea HOM05D007330 ORTHO05D009368 2.4e-11 72.8 65 56.9
Haze_23760 Corylus avellana HOM05D007330 ORTHO05D009368 5.3e-11 71.6 48 62.5
AUR62029217 Chenopodium quinoa HOM05D007330 ORTHO05D009368 1.1e-08 63.9 112 35.7
EL10Ac9g22568 Beta vulgaris HOM05D007330 ORTHO05D009368 8.8e-06 54.3 107 34.6


User provided reference genes

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