Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO801G0184 Papaver somniferum HOM05D002419 ORTHO05D008128 1.2e-83 313.2 158 100.0
PSO339G2915 Papaver somniferum HOM05D002419 ORTHO05D008128 1.8e-79 299.3 158 95.6
CSS0035547 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D008128 1.1e-49 200.3 154 64.3
Dinv29347 Davidia involucrata HOM05D002419 ORTHO05D008128 1.9e-49 199.5 155 64.5
Aqoxy6G01314 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 2.5e-49 199.1 154 65.6
Duzib170G1173 Durio zibethinus HOM05D002419 ORTHO05D008128 1.6e-48 196.4 142 64.8
GSVIVG01025134001 Vitis vinifera HOM05D002419 ORTHO05D008128 1.6e-48 196.4 154 61.7
TAR633G0359 Trochodendron aralioides HOM05D002419 ORTHO05D008128 8.0e-48 194.1 154 61.0
Actinidia03711 Actinidia chinensis HOM05D002419 ORTHO05D008128 2.3e-47 192.6 154 62.3
Aqoxy2G01471 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 2.3e-47 192.6 154 61.7
Potri.006G133800 Populus trichocarpa HOM05D002419 ORTHO05D008128 3.0e-47 192.2 156 62.2
Gorai.001G129900 Gossypium raimondii HOM05D002419 ORTHO05D008128 6.8e-47 191.0 142 62.7
Manes.11G141200 Manihot esculenta HOM05D002419 ORTHO05D008128 6.8e-47 191.0 154 62.3
Cpa.g.sc139.69 Carica papaya HOM05D002419 ORTHO05D008128 4.4e-46 188.3 155 60.6
MBI04_g27072_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D008128 7.5e-46 187.6 156 60.9
CiPaw.13G107000 Carya illinoinensis HOM05D002419 ORTHO05D008128 1.7e-45 186.4 155 54.8
PGR102G0399 Punica granatum HOM05D002419 ORTHO05D008128 1.7e-45 186.4 137 65.0
Thecc.09G260200 Theobroma cacao HOM05D002419 ORTHO05D008128 1.7e-45 186.4 155 59.4
Gohir.D07G120700 Gossypium hirsutum HOM05D002419 ORTHO05D008128 2.2e-45 186.0 141 61.7
TAR636G2038 Trochodendron aralioides HOM05D002419 ORTHO05D008128 2.8e-45 185.7 153 60.1
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 4.8e-45 184.9 147 59.2
COL.COLO4_32908 Corchorus olitorius HOM05D002419 ORTHO05D008128 8.3e-45 184.1 144 61.8
Lj2A1017T34 Lonicera japonica HOM05D002419 ORTHO05D008128 8.3e-45 184.1 154 60.4
LjContig00564g0025850 Lotus japonicus HOM05D002419 ORTHO05D008128 1.1e-44 183.7 156 58.3
arahy.Tifrunner.gnm1.ann1.AUHN72 Arachis hypogaea HOM05D002419 ORTHO05D008128 1.4e-44 183.3 152 58.6
TAR636G3373 Trochodendron aralioides HOM05D002419 ORTHO05D008128 1.4e-44 183.3 154 60.4
Prupe.6G094800 Prunus persica HOM05D002419 ORTHO05D008128 2.4e-44 182.6 156 59.6
Nitab4.5_0000106g0340 Nicotiana tabacum HOM05D002419 ORTHO05D008128 3.1e-44 182.2 156 57.7
Sabra06G0105100 Salix brachista HOM05D002419 ORTHO05D008128 3.1e-44 182.2 156 60.3
Haze_23915 Corylus avellana HOM05D002419 ORTHO05D008128 9.1e-44 180.6 156 55.1
COL.COLO4_25247 Corchorus olitorius HOM05D002419 ORTHO05D008128 1.2e-43 180.3 154 59.7
QL01p037215 Quercus lobata HOM05D002419 ORTHO05D008128 1.2e-43 180.3 155 55.5
TWI75G1733 Tripterygium wilfordii HOM05D002419 ORTHO05D008128 1.6e-43 179.9 137 59.9
Sabra03G0090700 Salix brachista HOM05D002419 ORTHO05D008128 2.0e-43 179.5 156 59.0
Gohir.A07G116300 Gossypium hirsutum HOM05D002419 ORTHO05D008128 2.7e-43 179.1 137 59.9
RcHm_v2.0_Chr5g0060661 Rosa chinensis HOM05D002419 ORTHO05D008128 4.5e-43 178.3 155 56.1
Solyc06g075000.3 Solanum lycopersicum HOM05D002419 ORTHO05D008128 5.9e-43 177.9 155 58.7
Sopen06g031430 Solanum pennellii HOM05D002419 ORTHO05D008128 5.9e-43 177.9 155 58.7
Sc15g0001550 Simmondsia chinensis HOM05D002419 ORTHO05D008128 7.7e-43 177.6 154 57.8
PGSC0003DMG400012002 Solanum tuberosum HOM05D002419 ORTHO05D008128 7.7e-43 177.6 155 58.7
CANSAT54G1052 Cannabis sativa HOM05D002419 ORTHO05D008128 1.0e-42 177.2 137 60.6
Ca_06160_v3 Cicer arietinum L. HOM05D002419 ORTHO05D008128 1.0e-42 177.2 155 56.1
Atru.chr3.3691 Acer truncatum HOM05D002419 ORTHO05D008128 1.7e-42 176.4 155 54.2
Psat2g021880 Pisum sativum HOM05D002419 ORTHO05D008128 2.2e-42 176.0 157 56.1
FAN16G1578 Fragaria x ananassa HOM05D002419 ORTHO05D008128 3.8e-42 175.3 154 56.5
Lalb_Chr25g0283021 Lupinus albus HOM05D002419 ORTHO05D008128 5.0e-42 174.9 156 56.4
FAN25G2109 Fragaria x ananassa HOM05D002419 ORTHO05D008128 6.5e-42 174.5 154 55.2
Rhsim01G0213200 Rhododendron simsii HOM05D002419 ORTHO05D008128 6.5e-42 174.5 154 59.7
vmacro14413 Vaccinium macrocarpon HOM05D002419 ORTHO05D008128 8.5e-42 174.1 155 59.4
CsaV3_6G021630 Cucumis sativus L. HOM05D002419 ORTHO05D008128 1.1e-41 173.7 154 53.9
EL10Ac8g19852 Beta vulgaris HOM05D002419 ORTHO05D008128 1.5e-41 173.3 155 52.9
Medtr5g087960 Medicago truncatula HOM05D002419 ORTHO05D008128 1.5e-41 173.3 141 57.4
Glyma.14G041000 Glycine max HOM05D002419 ORTHO05D008128 1.9e-41 172.9 155 55.5
ATR0680G185 Amborella trichopoda HOM05D002419 ORTHO05D008128 2.5e-41 172.6 132 59.8
VMungo0647G2488 Vigna mungo HOM05D002419 ORTHO05D008128 2.5e-41 172.6 156 54.5
MD11G1129900 Malus domestica HOM05D002419 ORTHO05D008128 3.2e-41 172.2 155 56.1
SalBow7G0817 Salvia bowleyana HOM05D002419 ORTHO05D008128 3.2e-41 172.2 152 55.3
CAN.G2109.1 Capsicum annuum HOM05D002419 ORTHO05D008128 4.2e-41 171.8 155 56.8
TPR.G11328 Trifolium pratense HOM05D002419 ORTHO05D008128 4.2e-41 171.8 137 57.7
Cc01_g10710 Coffea canephora HOM05D002419 ORTHO05D008128 5.5e-41 171.4 156 57.1
Rhsim01G0213400 Rhododendron simsii HOM05D002419 ORTHO05D008128 5.5e-41 171.4 154 59.1
BcaB08g36333 Brassica carinata HOM05D002419 ORTHO05D008128 1.2e-40 170.2 138 58.7
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 1.2e-40 170.2 143 58.0
BraA03t10435Z Brassica rapa HOM05D002419 ORTHO05D008128 2.1e-40 169.5 153 55.6
AT5G60335 Arabidopsis thaliana HOM05D002419 ORTHO05D008128 2.7e-40 169.1 155 54.2
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 2.7e-40 169.1 138 58.7
DCAR_006043 Daucus carota HOM05D002419 ORTHO05D008128 2.7e-40 169.1 140 58.6
Hund27375 Selenicereus undatus HOM05D002419 ORTHO05D008128 2.7e-40 169.1 150 55.3
Psat2g022480 Pisum sativum HOM05D002419 ORTHO05D008128 3.6e-40 168.7 142 56.3
Lsat_1_v5_gn_1_63680 Lactuca sativa HOM05D002419 ORTHO05D008128 4.7e-40 168.3 155 50.3
Migut.N02582 Erythranthe guttata HOM05D002419 ORTHO05D008128 6.1e-40 167.9 155 54.2
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 8.0e-40 167.5 154 53.9
BcaC04g19693 Brassica carinata HOM05D002419 ORTHO05D008128 1.4e-39 166.8 154 53.2
Glyma.02G275000 Glycine max HOM05D002419 ORTHO05D008128 1.8e-39 166.4 155 54.8
Carub.0008s2104 Capsella rubella HOM05D002419 ORTHO05D008128 2.3e-39 166.0 138 56.5
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 3.0e-39 165.6 154 52.6
AUR62027574 Chenopodium quinoa HOM05D002419 ORTHO05D008128 3.0e-39 165.6 154 51.9
ECA248G1487 Erigeron canadensis HOM05D002419 ORTHO05D008128 3.0e-39 165.6 154 51.9
Phvul.008G172000 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 3.0e-39 165.6 156 52.6
A03p11220 Brassica napus HOM05D002419 ORTHO05D008128 4.0e-39 165.2 153 54.2
CARHR274000 Cardamine hirsuta HOM05D002419 ORTHO05D008128 4.0e-39 165.2 137 56.9
ClCG02G020940 Citrullus lanatus HOM05D002419 ORTHO05D008128 4.0e-39 165.2 136 58.8
Phvul.008G206400 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 4.0e-39 165.2 130 60.0
Oeu049265.1 Olea europaea HOM05D002419 ORTHO05D008128 5.2e-39 164.9 152 53.9
AL8G36950 Arabidopsis lyrata HOM05D002419 ORTHO05D008128 1.5e-38 163.3 155 52.9
Thhalv10014838m.g Eutrema salsugineum HOM05D002419 ORTHO05D008128 2.6e-38 162.5 153 52.9
HanXRQChr01g0019131 Helianthus annuus HOM05D002419 ORTHO05D008128 3.4e-38 162.2 157 49.0
arahy.Tifrunner.gnm1.ann1.2RF374 Arachis hypogaea HOM05D002419 ORTHO05D008128 5.7e-38 161.4 135 55.6
Peaxi162Scf00029g01714 Petunia axillaris HOM05D002419 ORTHO05D008128 5.7e-38 161.4 157 54.8
THA.LOC104814842 Tarenaya hassleriana HOM05D002419 ORTHO05D008128 5.7e-38 161.4 155 52.9
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 9.8e-38 160.6 153 52.3
TPR.G11332 Trifolium pratense HOM05D002419 ORTHO05D008128 1.7e-37 159.8 156 52.6
Oeu009377.1 Olea europaea HOM05D002419 ORTHO05D008128 3.7e-37 158.7 152 53.9
Sp6g21940 Schrenkiella parvula HOM05D002419 ORTHO05D008128 4.9e-37 158.3 137 55.5
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 8.3e-37 157.5 153 51.0
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 1.8e-36 156.4 148 52.0
Lj2A891T18 Lonicera japonica HOM05D002419 ORTHO05D008128 3.1e-36 155.6 129 60.5
Eucgr.B02468 Eucalyptus grandis HOM05D002419 ORTHO05D008128 1.2e-35 153.7 157 51.0
SHI33804 Sapria himalayana HOM05D002419 ORTHO05D008128 1.7e-34 149.8 130 53.8
SEGI_36576 Sequoiadendron giganteum HOM05D002419 ORTHO05D008128 2.3e-34 149.4 141 54.6
Oeu049264.1 Olea europaea HOM05D002419 ORTHO05D008128 6.6e-34 147.9 132 56.1
Ah.01g024490 Amaranthus hybridus HOM05D002419 ORTHO05D008128 8.6e-34 147.5 133 57.1
unitig_699.g19262 Utricularia gibba HOM05D001486 ORTHO05D003845 1.2e-32 143.7 151 53.0
FAN11G3570 Fragaria x ananassa HOM05D002273 ORTHO05D008128 2.8e-32 142.5 112 62.5
FvH4_3g33270 Fragaria vesca HOM05D002273 ORTHO05D008128 3.6e-32 142.1 112 61.6
Nitab4.5_0000511g0130 Nicotiana tabacum HOM05D002419 ORTHO05D008128 8.0e-32 141.0 107 62.6
FAN21G3525 Fragaria x ananassa HOM05D002419 ORTHO05D008128 1.8e-31 139.8 116 57.8
HPP92_005092 Vanilla planifolia HOM05D002419 ORTHO05D008128 5.2e-31 138.3 131 54.2
SGA_v2.0_scaffold25G11093 Striga asiatica HOM05D002419 ORTHO05D008128 9.8e-30 134.0 141 50.4
MSTRG.17782 Avicennia marina HOM05D002419 ORTHO05D008128 1.3e-29 133.7 126 55.6
CBR_g17117 Chara braunii HOM05D002419 ORTHO05D008128 8.3e-29 131.0 129 44.2
Phvul.008G171900 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 1.3e-26 123.6 156 44.2
Zm00001eb211510 Zea mays HOM05D002419 ORTHO05D008128 1.3e-26 123.6 150 46.0
Pp3c27_1710 Physcomitrium patens HOM05D002419 ORTHO05D008128 8.0e-24 114.4 134 41.0
Zm00001eb088630 Zea mays HOM05D002419 ORTHO05D008128 4.0e-23 112.1 125 48.8
AUR62035785 Chenopodium quinoa HOM05D002419 ORTHO05D008128 5.2e-23 111.7 78 61.5
Mapoly0013s0067 Marchantia polymorpha HOM05D002419 ORTHO05D008128 2.6e-22 109.4 149 42.3
SMO356G0194 Selaginella moellendorffii HOM05D002419 ORTHO05D008128 4.1e-20 102.1 132 41.7
BcaB01g04653 Brassica carinata HOM05D002419 ORTHO05D008128 4.6e-19 98.6 88 56.8
MELO3C025746.2 Cucumis melo HOM05D002419 ORTHO05D008128 1.7e-18 96.7 90 53.3
Sed0027804 Sechium edule HOM05D002419 ORTHO05D008128 1.1e-17 94.0 152 38.8
AagrBONN_evm.TU.Sc2ySwM_228.5883 Anthoceros agrestis HOM05D002419 ORTHO05D008128 2.1e-16 89.7 101 47.5
AagrBONN_evm.TU.Sc2ySwM_228.5888 Anthoceros agrestis HOM05D002419 ORTHO05D008128 4.4e-14 82.0 139 39.6
PRCOL_00002156 Prasinoderma coloniale HOM05D002419 ORTHO05D008128 9.8e-14 80.9 131 36.6
Cre12.g560100 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D008128 2.4e-12 76.3 95 41.1
MD11G1130200 Malus domestica HOM05D005177 ORTHO05D008128 5.4e-12 75.1 90 46.7
MCO16G180 Micromonas commoda HOM05D002419 ORTHO05D008128 2.1e-11 73.2 76 46.1
BcaB01g04652 Brassica carinata HOM05D000125 ORTHO05D008128 3.0e-10 69.3 69 49.3
CARHR181070 Cardamine hirsuta HOM05D002419 ORTHO05D008128 8.6e-10 67.8 64 51.6


User provided reference genes

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