Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO801G0072 Papaver somniferum HOM05D005215 ORTHO05D006382 8.5e-122 440.3 211 100.0
PSO339G6572 Papaver somniferum HOM05D005215 ORTHO05D006382 1.7e-117 426.0 211 97.2
CiPaw.14G033600 Carya illinoinensis HOM05D005215 ORTHO05D006382 1.0e-90 337.0 209 74.6
MD07G1058400 Malus domestica HOM05D005215 ORTHO05D006382 1.3e-90 336.7 208 75.0
ClCG08G008310 Citrullus lanatus HOM05D005215 ORTHO05D006382 1.7e-90 336.3 211 74.9
TWI15G0816 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 1.7e-90 336.3 209 74.6
Dinv11822 Davidia involucrata HOM05D005215 ORTHO05D006382 2.3e-90 335.9 209 73.7
CiPaw.13G040900 Carya illinoinensis HOM05D005215 ORTHO05D006382 8.6e-90 334.0 209 73.2
Manes.18G138580 Manihot esculenta HOM05D005215 ORTHO05D006382 1.1e-89 333.6 207 73.9
Aqoxy4G02757 Aquilegia oxysepala HOM05D005215 ORTHO05D006382 1.5e-89 333.2 209 73.2
Hund06789 Selenicereus undatus HOM05D005215 ORTHO05D006382 1.9e-89 332.8 207 75.4
vmacro07260 Vaccinium macrocarpon HOM05D005215 ORTHO05D006382 1.9e-89 332.8 208 73.6
PSO384G1677 Papaver somniferum HOM05D005215 ORTHO05D006382 2.5e-89 332.4 210 72.4
arahy.Tifrunner.gnm1.ann1.E5H8ET Arachis hypogaea HOM05D005215 ORTHO05D006382 3.3e-89 332.0 209 72.2
TPR.G2443 Trifolium pratense HOM05D005215 ORTHO05D006382 4.3e-89 331.6 209 72.7
PSO339G4522 Papaver somniferum HOM05D005215 ORTHO05D006382 7.3e-89 330.9 210 72.4
Atru.chr12.1046 Acer truncatum HOM05D005215 ORTHO05D006382 9.5e-89 330.5 209 71.8
PGR044G2198 Punica granatum HOM05D005215 ORTHO05D006382 9.5e-89 330.5 209 73.2
TWI63G0161 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 9.5e-89 330.5 210 73.3
Cc02_g09580 Coffea canephora HOM05D005215 ORTHO05D006382 1.2e-88 330.1 207 72.9
Sed0008445 Sechium edule HOM05D005215 ORTHO05D006382 1.2e-88 330.1 207 73.9
SalBow3G3150 Salvia bowleyana HOM05D005215 ORTHO05D006382 1.6e-88 329.7 209 71.8
SGA_v2.0_scaffold329G48861 Striga asiatica HOM05D005215 ORTHO05D006382 1.6e-88 329.7 209 72.7
Actinidia34727 Actinidia chinensis HOM05D005215 ORTHO05D006382 2.1e-88 329.3 209 71.8
QL04p046761 Quercus lobata HOM05D005215 ORTHO05D006382 3.6e-88 328.6 209 70.3
EL10Ac4g07754 Beta vulgaris HOM05D005215 ORTHO05D006382 6.2e-88 327.8 207 72.9
Potri.010G240000 Populus trichocarpa HOM05D005215 ORTHO05D006382 6.2e-88 327.8 207 72.0
CSS0033765 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 8.1e-88 327.4 209 73.2
Ciclev10016681m.g Citrus clementina HOM05D005215 ORTHO05D006382 8.1e-88 327.4 209 70.8
MBI01_g04055_MAGBIO Magnolia biondii HOM05D005215 ORTHO05D006382 8.1e-88 327.4 209 71.8
Actinidia18624 Actinidia chinensis HOM05D005215 ORTHO05D006382 1.1e-87 327.0 199 75.4
Hma1.2p1_0756F.1_g213190 Hydrangea macrophylla HOM05D005215 ORTHO05D006382 1.4e-87 326.6 209 71.3
Nn6g34863 Nelumbo nucifera HOM05D005215 ORTHO05D006382 1.4e-87 326.6 207 73.9
MD02G1262000 Malus domestica HOM05D005215 ORTHO05D006382 1.8e-87 326.2 210 70.5
CAN.G1417.3 Capsicum annuum HOM05D005215 ORTHO05D006382 2.3e-87 325.9 207 72.5
Sc06g0002380 Simmondsia chinensis HOM05D005215 ORTHO05D006382 2.3e-87 325.9 209 70.3
Thecc.10G114600 Theobroma cacao HOM05D005215 ORTHO05D006382 2.3e-87 325.9 209 72.7
TAR623G0377 Trochodendron aralioides HOM05D005215 ORTHO05D006382 2.3e-87 325.9 207 72.9
Medtr1g111860 Medicago truncatula HOM05D005215 ORTHO05D006382 3.1e-87 325.5 207 72.9
Sed0014754 Sechium edule HOM05D005215 ORTHO05D006382 3.1e-87 325.5 207 72.9
TAR369G1081 Trochodendron aralioides HOM05D005215 ORTHO05D006382 4.0e-87 325.1 209 72.7
Lj5g0024589 Lotus japonicus HOM05D005215 ORTHO05D006382 5.2e-87 324.7 209 71.3
BraA04t18418Z Brassica rapa HOM05D005215 ORTHO05D006382 6.8e-87 324.3 208 70.7
AUR62042083 Chenopodium quinoa HOM05D005215 ORTHO05D006382 8.9e-87 323.9 207 71.5
Thhalv10017213m.g Eutrema salsugineum HOM05D005215 ORTHO05D006382 8.9e-87 323.9 208 70.7
ECA232G3141 Erigeron canadensis HOM05D005215 ORTHO05D006382 1.2e-86 323.6 207 70.5
MSTRG.27562 Avicennia marina HOM05D005215 ORTHO05D006382 1.5e-86 323.2 208 70.7
HanXRQChr07g0194041 Helianthus annuus HOM05D005215 ORTHO05D006382 2.6e-86 322.4 207 71.0
Psat0s1904g0160 Pisum sativum HOM05D005215 ORTHO05D006382 3.4e-86 322.0 209 71.3
BcaC02g07452 Brassica carinata HOM05D005215 ORTHO05D006382 4.4e-86 321.6 208 70.2
Lsat_1_v5_gn_2_104201 Lactuca sativa HOM05D005215 ORTHO05D006382 4.4e-86 321.6 207 71.0
Nitab4.5_0009484g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 7.6e-86 320.9 207 70.5
RcHm_v2.0_Chr7g0197741 Rosa chinensis HOM05D005215 ORTHO05D006382 7.6e-86 320.9 204 72.5
THA.LOC104801304 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 9.9e-86 320.5 209 71.3
C04p66830 Brassica napus HOM05D005215 ORTHO05D006382 1.3e-85 320.1 208 69.2
Migut.F00868 Erythranthe guttata HOM05D005215 ORTHO05D006382 1.3e-85 320.1 209 70.3
THA.LOC104811337 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 1.3e-85 320.1 209 69.9
AL4G36010 Arabidopsis lyrata HOM05D005215 ORTHO05D006382 1.7e-85 319.7 207 70.0
BolC4t28184H Brassica oleracea HOM05D005215 ORTHO05D006382 1.7e-85 319.7 208 69.2
CARHR133400 Cardamine hirsuta HOM05D005215 ORTHO05D006382 2.2e-85 319.3 200 72.0
ATR0776G030 Amborella trichopoda HOM05D005215 ORTHO05D006382 2.9e-85 318.9 209 70.3
Gorai.009G303500 Gossypium raimondii HOM05D005215 ORTHO05D006382 2.9e-85 318.9 209 71.3
Prupe.2G069900 Prunus persica HOM05D005215 ORTHO05D006382 2.9e-85 318.9 209 70.3
Sp4g21070 Schrenkiella parvula HOM05D005215 ORTHO05D006382 2.9e-85 318.9 208 69.2
CSS0044679 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 3.7e-85 318.5 199 73.4
Gohir.D05G288400 Gossypium hirsutum HOM05D005215 ORTHO05D006382 3.7e-85 318.5 209 71.3
Sabra08G0012600 Salix brachista HOM05D005215 ORTHO05D006382 3.7e-85 318.5 207 70.5
Migut.C00229 Erythranthe guttata HOM05D005215 ORTHO05D006382 4.9e-85 318.2 209 69.9
Solyc11g006770.3 Solanum lycopersicum HOM05D005215 ORTHO05D006382 4.9e-85 318.2 207 70.0
Sopen11g002700 Solanum pennellii HOM05D005215 ORTHO05D006382 4.9e-85 318.2 207 70.0
PGSC0003DMG400023967 Solanum tuberosum HOM05D005215 ORTHO05D006382 4.9e-85 318.2 207 70.0
arahy.Tifrunner.gnm1.ann1.KL5LPC Arachis hypogaea HOM05D005215 ORTHO05D006382 6.4e-85 317.8 232 64.7
Eucgr.J00268 Eucalyptus grandis HOM05D005215 ORTHO05D006382 6.4e-85 317.8 207 72.5
Aa31LG5G21000 Aethionema arabicum HOM05D005215 ORTHO05D006382 8.3e-85 317.4 209 67.9
CANSAT56G3442 Cannabis sativa HOM05D005215 ORTHO05D006382 1.1e-84 317.0 209 70.3
Gohir.A05G287300 Gossypium hirsutum HOM05D005215 ORTHO05D006382 1.1e-84 317.0 209 71.3
Lsat_1_v5_gn_0_8140 Lactuca sativa HOM05D005215 ORTHO05D006382 1.1e-84 317.0 207 69.6
AT2G38710 Arabidopsis thaliana HOM05D005215 ORTHO05D006382 1.9e-84 316.2 200 71.0
Nitab4.5_0002586g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 1.9e-84 316.2 207 69.6
GSVIVG01010684001 Vitis vinifera HOM05D005215 ORTHO05D006382 1.9e-84 316.2 200 72.5
DCAR_006336 Daucus carota HOM05D005215 ORTHO05D006382 2.4e-84 315.8 202 72.8
Potri.008G019200 Populus trichocarpa HOM05D005215 ORTHO05D006382 2.4e-84 315.8 207 69.1
HanXRQChr11g0321671 Helianthus annuus HOM05D005215 ORTHO05D006382 3.2e-84 315.5 207 68.6
CDE06G1220 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 4.1e-84 315.1 207 68.1
Duzib114G0243 Durio zibethinus HOM05D005215 ORTHO05D006382 5.4e-84 314.7 210 70.5
Migut.B01734 Erythranthe guttata HOM05D005215 ORTHO05D006382 5.4e-84 314.7 209 68.9
Carub.0004s2071 Capsella rubella HOM05D005215 ORTHO05D006382 7.1e-84 314.3 208 68.3
FvH4_5g02370 Fragaria vesca HOM05D005215 ORTHO05D006382 7.1e-84 314.3 204 71.6
FAN13G0513 Fragaria x ananassa HOM05D005215 ORTHO05D006382 9.2e-84 313.9 204 71.1
C03p25540 Brassica napus HOM05D005215 ORTHO05D006382 1.2e-83 313.5 203 70.4
HPP92_020962 Vanilla planifolia HOM05D005215 ORTHO05D006382 1.2e-83 313.5 200 69.5
FAN18G1091 Fragaria x ananassa HOM05D005215 ORTHO05D006382 2.1e-83 312.8 204 71.1
BolC3t14941H Brassica oleracea HOM05D005215 ORTHO05D006382 4.6e-83 311.6 203 70.0
FAN04G2904 Fragaria x ananassa HOM05D005215 ORTHO05D006382 4.6e-83 311.6 204 70.6
A03p21550 Brassica napus HOM05D005215 ORTHO05D006382 6.0e-83 311.2 203 69.5
BraA03t11391Z Brassica rapa HOM05D005215 ORTHO05D006382 6.0e-83 311.2 203 69.5
Glyma.20G074500 Glycine max HOM05D005215 ORTHO05D006382 6.0e-83 311.2 203 72.4
Phvul.007G235600 Phaseolus vulgaris HOM05D005215 ORTHO05D006382 6.0e-83 311.2 203 70.9
Glyma.10G123100 Glycine max HOM05D005215 ORTHO05D006382 7.8e-83 310.8 203 71.9
CDE08G0922 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 3.9e-82 308.5 207 66.2
VMungo0720G2906 Vigna mungo HOM05D005215 ORTHO05D006382 5.1e-82 308.1 203 70.0
Cpa.g.sc704.2 Carica papaya HOM05D005215 ORTHO05D006382 8.6e-82 307.4 194 73.7
Peaxi162Scf00125g00233 Petunia axillaris HOM05D005215 ORTHO05D006382 3.3e-81 305.4 207 67.1
Zm00001eb390460 Zea mays HOM05D005215 ORTHO05D006382 6.2e-80 301.2 208 66.3
Mapoly0059s0056 Marchantia polymorpha HOM05D005215 ORTHO05D006382 1.8e-79 299.7 203 67.0
Oeu030225.2 Olea europaea HOM05D005215 ORTHO05D006382 3.1e-79 298.9 218 64.7
Os10g0573100 Oryza sativa ssp. japonica HOM05D005215 ORTHO05D006382 3.1e-79 298.9 208 64.4
Haze_03299 Corylus avellana HOM05D005215 ORTHO05D006382 6.8e-79 297.7 249 59.8
SMO331G0011 Selaginella moellendorffii HOM05D005215 ORTHO05D006382 8.9e-79 297.4 203 66.5
AUR62041518 Chenopodium quinoa HOM05D005215 ORTHO05D006382 1.5e-78 296.6 227 62.1
SEGI_01358 Sequoiadendron giganteum HOM05D005215 ORTHO05D006382 1.5e-78 296.6 203 67.0
Pp3c3_21710 Physcomitrium patens HOM05D005215 ORTHO05D006382 3.8e-77 292.0 203 65.5
AagrBONN_evm.TU.Sc2ySwM_117.3510 Anthoceros agrestis HOM05D005215 ORTHO05D006382 6.4e-77 291.2 200 66.5
Ah.11g047220 Amaranthus hybridus HOM05D005215 ORTHO05D006382 8.4e-77 290.8 207 66.2
Oeu026607.3 Olea europaea HOM05D005215 ORTHO05D006382 2.3e-74 282.7 295 49.8
FAN08G2650 Fragaria x ananassa HOM05D005215 ORTHO05D006382 5.1e-74 281.6 205 65.4
MELO3C019899.2 Cucumis melo HOM05D005215 ORTHO05D006382 9.6e-73 277.3 175 74.3
Lj3A925G70 Lonicera japonica HOM05D005215 ORTHO05D006382 1.4e-71 273.5 173 73.4
Dinv10934 Davidia involucrata HOM05D005215 ORTHO05D006382 6.9e-71 271.2 167 74.9
Lalb_Chr06g0166341 Lupinus albus HOM05D005215 ORTHO05D006382 1.3e-61 240.4 146 75.3
A04p29510 Brassica napus HOM05D005215 ORTHO05D006382 2.9e-61 239.2 146 74.0
Lalb_Chr02g0146211 Lupinus albus HOM05D005215 ORTHO05D006382 2.9e-61 239.2 146 75.3
COL.COLO4_05151 Corchorus olitorius HOM05D005215 ORTHO05D006382 6.7e-58 228.0 425 36.2
Pp3c4_19060 Physcomitrium patens HOM05D005215 ORTHO05D006382 2.5e-57 226.1 172 63.4
Nn2g14190 Nelumbo nucifera HOM05D005215 ORTHO05D006382 9.6e-57 224.2 204 56.4
Haze_26289 Corylus avellana HOM05D005215 ORTHO05D006382 1.1e-49 200.7 200 48.5
CBR_g39962 Chara braunii HOM05D005215 ORTHO05D006382 9.6e-49 197.6 138 64.5
CsaV3_6G004280 Cucumis sativus L. HOM05D005215 ORTHO05D006382 2.1e-48 196.4 114 78.1
Cre03.g146687 Chlamydomonas reinhardtii HOM05D005215 ORTHO05D006382 8.2e-48 194.5 196 49.0
Ca_25655_v3 Cicer arietinum L. HOM05D000113 ORTHO05D001798 1.0e-42 177.6 126 67.5
MCO01G395 Micromonas commoda HOM05D005215 ORTHO05D006382 4.3e-41 172.2 202 43.1
Potri.008G019325 Populus trichocarpa HOM05D005215 ORTHO05D006382 1.8e-39 166.8 107 74.8
PRCOL_00005793 Prasinoderma coloniale HOM05D005215 ORTHO05D006382 9.4e-36 154.5 161 50.3
unitig_88.g27810 Utricularia gibba HOM05D005215 ORTHO05D006382 1.3e-32 144.1 89 70.8
Sc06g0000010 Simmondsia chinensis HOM05D005215 ORTHO05D006382 1.7e-29 133.7 96 61.5
Dinv02216 Davidia involucrata HOM05D005215 ORTHO05D006382 9.4e-28 127.9 75 76.0
Cfa010328 Carpinus fangiana HOM05D005215 ORTHO05D006382 3.9e-26 122.5 89 66.3
BcaNung04832 Brassica carinata HOM05D005215 ORTHO05D006382 5.7e-25 118.6 93 57.0
unitig_88.g27811 Utricularia gibba HOM05D005215 ORTHO05D006382 3.0e-18 96.3 62 67.7
Lalb_Chr06g0166351 Lupinus albus HOM05D005215 ORTHO05D006382 1.5e-17 94.0 72 58.3
Lalb_Chr02g0146221 Lupinus albus HOM05D005215 ORTHO05D006382 1.7e-16 90.5 63 61.9
Actinidia27053 Actinidia chinensis HOM05D005215 ORTHO05D006382 4.8e-16 89.0 59 67.8
Sabra16G0322800 Salix brachista HOM05D005215 ORTHO05D006382 1.8e-15 87.0 59 67.8
Peaxi162Scf00959g00416 Petunia axillaris HOM05D005215 ORTHO05D006382 2.0e-09 67.0 40 80.0
Peaxi162Scf00959g00417 Petunia axillaris HOM05D005215 ORTHO05D306904 6.3e-08 62.0 58 56.9


User provided reference genes

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