Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO801G0034 Papaver somniferum HOM05D008526 ORTHO05D010380 3.0e-96 355.1 178 100.0
PSO782G0255 Papaver somniferum HOM05D008526 ORTHO05D010380 1.2e-76 290.0 176 81.8
PSO478G4591 Papaver somniferum HOM05D008526 ORTHO05D010380 1.2e-63 246.9 177 69.5
PSO675G3708 Papaver somniferum HOM05D008526 ORTHO05D010380 4.2e-61 238.4 174 72.4
PSO478G2167 Papaver somniferum HOM05D008526 ORTHO05D010380 4.6e-60 235.0 133 85.7
PSO339G1382 Papaver somniferum HOM05D008526 ORTHO05D010380 6.0e-60 234.6 133 85.0
PSO832G3122 Papaver somniferum HOM05D008526 ORTHO05D010380 6.6e-59 231.1 133 85.0
PSO724G1104 Papaver somniferum HOM05D008526 ORTHO05D010380 2.8e-57 225.7 133 82.0
PSO443G0086 Papaver somniferum HOM05D008526 ORTHO05D010380 4.0e-56 221.9 121 89.3
PSO832G3699 Papaver somniferum HOM05D008526 ORTHO05D010380 3.2e-53 212.2 122 83.6
PSO675G7499 Papaver somniferum HOM05D008526 ORTHO05D010380 7.1e-53 211.1 165 66.1
PSO832G4314 Papaver somniferum HOM05D008526 ORTHO05D010380 1.2e-52 210.3 181 61.3
PSO765G0053 Papaver somniferum HOM05D008526 ORTHO05D010380 1.1e-50 203.8 118 83.9
PSO339G6242 Papaver somniferum HOM05D008526 ORTHO05D010380 6.2e-49 198.0 173 61.8
PSO339G2614 Papaver somniferum HOM05D008526 ORTHO05D010380 4.2e-45 185.3 154 62.3
PSO386G0208 Papaver somniferum HOM05D008526 ORTHO05D010380 3.5e-44 182.2 104 83.7
PSO541G2643 Papaver somniferum HOM05D008526 ORTHO05D010380 6.0e-44 181.4 136 66.9
PSO801G0695 Papaver somniferum HOM05D008526 ORTHO05D010380 8.7e-43 177.6 101 84.2
PSO170G3574 Papaver somniferum HOM05D008526 ORTHO05D010380 1.5e-42 176.8 154 61.0
PSO339G2856 Papaver somniferum HOM05D008526 ORTHO05D010380 3.7e-41 172.2 151 60.3
PSO210G3798 Papaver somniferum HOM05D008526 ORTHO05D010380 4.0e-40 168.7 135 67.4
PSO013G0093 Papaver somniferum HOM05D008526 ORTHO05D010380 1.4e-21 107.1 89 58.4
PSO478G3637 Papaver somniferum HOM05D008526 ORTHO05D010380 6.1e-20 101.7 57 80.7
FvH4_4g15323 Fragaria vesca HOM05D008321 ORTHO05D010380 7.9e-20 101.3 171 33.3
PSO541G1961 Papaver somniferum HOM05D008526 ORTHO05D010380 7.9e-20 101.3 57 80.7
FvH4_4g10363 Fragaria vesca HOM05D008321 ORTHO05D003768 3.9e-19 99.0 171 33.9
PSO478G0504 Papaver somniferum HOM05D008526 ORTHO05D010380 3.9e-19 99.0 56 80.4
ClCG07G007690 Citrullus lanatus HOM05D000107 ORTHO05D000062 2.0e-18 96.7 172 37.8
PSO210G7597 Papaver somniferum HOM05D008526 ORTHO05D010380 3.3e-18 95.9 57 75.4
CANSAT25G0318 Cannabis sativa HOM05D007314 ORTHO05D010380 5.7e-18 95.1 171 38.6
FvH4_5g37213 Fragaria vesca HOM05D008321 ORTHO05D010380 2.2e-17 93.2 175 32.0
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 6.3e-17 91.7 172 36.0
Rhsim06G0121300 Rhododendron simsii HOM05D007314 ORTHO05D010380 3.1e-16 89.4 173 36.4
Rhsim03G0123400 Rhododendron simsii HOM05D007314 ORTHO05D010380 6.9e-16 88.2 172 35.5
PSO675G3181 Papaver somniferum HOM05D008526 ORTHO05D010380 9.1e-16 87.8 52 76.9
PSO675G5349 Papaver somniferum HOM05D008526 ORTHO05D010380 1.2e-15 87.4 83 56.6
PSO478G4220 Papaver somniferum HOM05D008526 ORTHO05D010380 1.5e-15 87.0 51 78.4
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 3.4e-15 85.9 175 30.9
Rhsim04G0083300 Rhododendron simsii HOM05D007314 ORTHO05D010380 5.9e-15 85.1 172 33.7
FvH4_6g20173 Fragaria vesca HOM05D008321 ORTHO05D010380 8.5e-14 81.3 145 31.0
FvH4_4g16173 Fragaria vesca HOM05D008321 ORTHO05D003768 2.1e-12 76.6 139 33.1
FAN16G0584 Fragaria x ananassa HOM05D000539 ORTHO05D000233 3.6e-12 75.9 158 28.5
FAN24G2468 Fragaria x ananassa HOM05D000539 ORTHO05D000233 3.6e-12 75.9 158 28.5
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 4.7e-12 75.5 170 32.9
FAN17G0771 Fragaria x ananassa HOM05D000539 ORTHO05D000233 8.0e-12 74.7 158 27.8
Rhsim01G0136300 Rhododendron simsii HOM05D004909 ORTHO05D009316 8.0e-12 74.7 171 32.2
Sed0022033 Sechium edule HOM05D000539 ORTHO05D000233 8.0e-12 74.7 174 31.0
FAN22G1565 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.0e-11 74.3 158 27.8
RcHm_v2.0_Chr4g0393861 Rosa chinensis HOM05D000539 ORTHO05D000233 1.4e-11 73.9 179 28.5
FAN17G3107 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.8e-11 73.6 158 27.8
FAN25G0088 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.8e-11 73.6 158 27.8
FAN09G2875 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.3e-11 73.2 158 28.5
CsaV3_4G007110 Cucumis sativus L. HOM05D000539 ORTHO05D000233 3.9e-11 72.4 180 30.0
RcHm_v2.0_Chr7g0235651 Rosa chinensis HOM05D000539 ORTHO05D000233 3.9e-11 72.4 157 31.2
RcHm_v2.0_Chr4g0407991 Rosa chinensis HOM05D000539 ORTHO05D000233 5.2e-11 72.0 180 27.8
CANSAT21G2150 Cannabis sativa HOM05D001309 ORTHO05D000385 8.8e-11 71.2 172 30.2
MELO3C016215.2 Cucumis melo HOM05D000539 ORTHO05D000233 8.8e-11 71.2 176 29.5
RcHm_v2.0_Chr5g0072981 Rosa chinensis HOM05D000539 ORTHO05D000233 8.8e-11 71.2 180 26.1
Duzib084G0418 Durio zibethinus HOM05D000539 ORTHO05D000233 1.5e-10 70.5 174 31.0
Rhsim01G0043800 Rhododendron simsii HOM05D007314 ORTHO05D003768 2.0e-10 70.1 146 31.5
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 2.6e-10 69.7 174 33.9
Aqoxy6G01916 Aquilegia oxysepala HOM05D000539 ORTHO05D000233 5.7e-10 68.6 169 27.8
ClCG07G011140 Citrullus lanatus HOM05D000539 ORTHO05D000233 5.7e-10 68.6 180 28.3
GSVIVG01000866001 Vitis vinifera HOM05D000539 ORTHO05D000233 9.7e-10 67.8 171 28.7
CANSAT11G0213 Cannabis sativa HOM05D001309 ORTHO05D000385 1.3e-09 67.4 172 29.1
RcHm_v2.0_Chr1g0329531 Rosa chinensis HOM05D000539 ORTHO05D000233 1.3e-09 67.4 179 26.8
TAR625G0191 Trochodendron aralioides HOM05D008572 ORTHO05D010686 1.3e-09 67.4 155 32.3
MBI14_g08057_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 1.7e-09 67.0 167 27.5
PSO541G5385 Papaver somniferum HOM05D000539 ORTHO05D000233 2.2e-09 66.6 172 27.3
PSO675G7387 Papaver somniferum HOM05D000539 ORTHO05D000233 3.7e-09 65.9 172 27.3
PSO170G0701 Papaver somniferum HOM05D008572 ORTHO05D010686 6.3e-09 65.1 152 29.6
Rhsim01G0098700 Rhododendron simsii HOM05D007314 ORTHO05D010380 6.3e-09 65.1 172 30.2
HanXRQChr09g0253291 Helianthus annuus HOM05D008452 ORTHO05D000233 1.4e-08 63.9 180 26.7
Nn7g37626 Nelumbo nucifera HOM05D001309 ORTHO05D000385 1.4e-08 63.9 92 40.2
PSO339G6350 Papaver somniferum HOM05D008572 ORTHO05D010686 1.4e-08 63.9 151 26.5
FAN28G1622 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.8e-08 63.5 138 27.5
FvH4_2g07142 Fragaria vesca HOM05D008321 ORTHO05D003768 2.4e-08 63.2 132 28.0
MBI12_g03766_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 2.4e-08 63.2 154 27.9
MBI15_g20157_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D010248 2.4e-08 63.2 156 28.2
BolC8t50055H Brassica oleracea HOM05D008309 ORTHO05D010308 3.1e-08 62.8 165 32.1
DCAR_031676 Daucus carota HOM05D000539 ORTHO05D000233 3.1e-08 62.8 179 27.9
HanXRQChr05g0158771 Helianthus annuus HOM05D008452 ORTHO05D010294 3.1e-08 62.8 180 26.1
HanXRQChr11g0349201 Helianthus annuus HOM05D008452 ORTHO05D010294 3.1e-08 62.8 180 26.1
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 3.1e-08 62.8 180 26.1
PSO675G3027 Papaver somniferum HOM05D008572 ORTHO05D010686 3.1e-08 62.8 151 25.2
HanXRQChr17g0547341 Helianthus annuus HOM05D008452 ORTHO05D010294 4.1e-08 62.4 180 26.1
Manes.10G118800 Manihot esculenta HOM05D001309 ORTHO05D000385 4.1e-08 62.4 179 28.5
MBI15_g06453_MAGBIO Magnolia biondii HOM05D007906 ORTHO05D004199 5.3e-08 62.0 157 29.3
MELO3C034178.2 Cucumis melo HOM05D000539 ORTHO05D000233 7.0e-08 61.6 164 27.4
BolC3t19893H Brassica oleracea HOM05D008309 ORTHO05D010308 9.1e-08 61.2 165 32.1
BraA04t17652Z Brassica rapa HOM05D008309 ORTHO05D010308 9.1e-08 61.2 165 32.1
FAN15G1280 Fragaria x ananassa HOM05D000539 ORTHO05D000233 9.1e-08 61.2 158 27.2
HanXRQChr13g0403311 Helianthus annuus HOM05D008452 ORTHO05D000233 9.1e-08 61.2 180 25.6
TAR633G0853 Trochodendron aralioides HOM05D001163 ORTHO05D001769 9.1e-08 61.2 173 26.6
CANSAT11G1463 Cannabis sativa HOM05D001309 ORTHO05D000385 1.2e-07 60.8 123 31.7
PSO801G0768 Papaver somniferum HOM05D008526 ORTHO05D010380 1.6e-07 60.5 41 63.4
RcHm_v2.0_Chr2g0108861 Rosa chinensis HOM05D000539 ORTHO05D000233 1.6e-07 60.5 137 29.9
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 2.0e-07 60.1 170 27.6
ECA247G3253 Erigeron canadensis HOM05D005763 ORTHO05D005970 2.0e-07 60.1 177 28.2
Sed0028051 Sechium edule HOM05D007314 ORTHO05D010380 2.0e-07 60.1 107 32.7
MELO3C028785.2 Cucumis melo HOM05D000539 ORTHO05D000233 2.6e-07 59.7 175 27.4
FAN18G4094 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.6e-07 59.7 125 28.0
MBI16_g35338_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 2.6e-07 59.7 158 26.6
TAR365G0008 Trochodendron aralioides HOM05D001163 ORTHO05D001769 2.6e-07 59.7 173 26.0
TAR365G0123 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.6e-07 59.7 173 26.0
TAR369G0367 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.6e-07 59.7 173 26.0
TAR622G0651 Trochodendron aralioides HOM05D000141 ORTHO05D000385 2.6e-07 59.7 173 26.0
BolC2t08113H Brassica oleracea HOM05D008309 ORTHO05D010308 3.5e-07 59.3 165 31.5
MBI11_g23345_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 3.5e-07 59.3 160 28.1
MBI01_g06508_MAGBIO Magnolia biondii HOM05D007906 ORTHO05D010248 4.5e-07 58.9 164 26.8
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 4.5e-07 58.9 172 25.0
CANSAT01G0116 Cannabis sativa HOM05D000539 ORTHO05D000233 7.7e-07 58.2 169 27.8
FvH4_1g29233 Fragaria vesca HOM05D008321 ORTHO05D003768 7.7e-07 58.2 109 31.2
RcHm_v2.0_Chr5g0064791 Rosa chinensis HOM05D007314 ORTHO05D023934 1.0e-06 57.8 134 31.3
FAN11G2121 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.3e-06 57.4 109 33.0
MBI06_g45493_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 1.3e-06 57.4 158 25.3
TAR629G3448 Trochodendron aralioides HOM05D001163 ORTHO05D001769 1.3e-06 57.4 96 33.3
PSO724G0504 Papaver somniferum HOM05D008572 ORTHO05D010686 1.7e-06 57.0 151 28.5
FvH4_4g10052 Fragaria vesca HOM05D000539 ORTHO05D000233 2.2e-06 56.6 143 28.7
CSS0018077 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.9e-06 56.2 171 24.0
HanXRQChr03g0064971 Helianthus annuus HOM05D001309 ORTHO05D005970 2.9e-06 56.2 173 26.6
MBI01_g41484_MAGBIO Magnolia biondii HOM05D007906 ORTHO05D010248 2.9e-06 56.2 164 26.2
RcHm_v2.0_Chr1g0341871 Rosa chinensis HOM05D005012 ORTHO05D005886 2.9e-06 56.2 133 28.6
MBI09_g12045_MAGBIO Magnolia biondii HOM05D007906 ORTHO05D004199 5.0e-06 55.5 155 27.1
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 5.0e-06 55.5 173 26.0
Rhsim11G0005200 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.0e-06 55.5 68 41.2
RcHm_v2.0_Chr6g0273901 Rosa chinensis HOM05D005012 ORTHO05D005886 5.0e-06 55.5 157 26.8
Aqoxy3G02895 Aquilegia oxysepala HOM05D002644 ORTHO05D003267 6.5e-06 55.1 118 33.9
CANSAT54G0141 Cannabis sativa HOM05D009806 ORTHO05D000233 6.5e-06 55.1 152 26.3
CSS0030327 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 8.5e-06 54.7 171 23.4
RhsimUnG0146400 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.5e-06 54.7 68 41.2


User provided reference genes

Program Settings