Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G5731 Papaver somniferum HOM05D000116 ORTHO05D000703 1.1e-60 236.5 122 100.0
PSO675G9044 Papaver somniferum HOM05D000116 ORTHO05D000703 7.3e-17 90.9 59 78.0
PSO541G4694 Papaver somniferum HOM05D000116 ORTHO05D000703 6.2e-16 87.8 59 76.3
Dinv33589 Davidia involucrata HOM05D000116 ORTHO05D000703 2.0e-14 82.8 56 71.4
Nn5g29171 Nelumbo nucifera HOM05D000116 ORTHO05D000703 3.4e-14 82.0 59 69.5
Cc07_g10270 Coffea canephora HOM05D000116 ORTHO05D000703 4.5e-14 81.6 54 70.4
Dinv40043 Davidia involucrata HOM05D000116 ORTHO05D000703 1.3e-13 80.1 56 71.4
Hma1.2p1_0913F.1_g236090 Hydrangea macrophylla HOM05D000116 ORTHO05D000703 1.3e-13 80.1 54 74.1
Prupe.7G163800 Prunus persica HOM05D007510 ORTHO05D000703 1.3e-13 80.1 48 79.2
Aqoxy6G02427 Aquilegia oxysepala HOM05D000116 ORTHO05D000703 1.7e-13 79.7 54 66.7
MELO3C007879.2 Cucumis melo HOM05D000116 ORTHO05D000703 1.7e-13 79.7 47 80.9
FAN23G2891 Fragaria x ananassa HOM05D000116 ORTHO05D000703 2.2e-13 79.3 47 78.7
RcHm_v2.0_Chr2g0100301 Rosa chinensis HOM05D000116 ORTHO05D000703 2.2e-13 79.3 50 76.0
MSTRG.23274 Avicennia marina HOM05D000116 ORTHO05D000703 2.9e-13 79.0 54 70.4
Migut.H02493 Erythranthe guttata HOM05D000116 ORTHO05D000703 3.8e-13 78.6 54 68.5
Nitab4.5_0002266g0040 Nicotiana tabacum HOM05D000116 ORTHO05D000703 3.8e-13 78.6 54 72.2
AUR62007638 Chenopodium quinoa HOM05D000116 ORTHO05D000703 4.9e-13 78.2 47 78.7
AUR62007662 Chenopodium quinoa HOM05D000116 ORTHO05D000703 4.9e-13 78.2 47 78.7
Cpa.g.sc6.198 Carica papaya HOM05D000116 ORTHO05D000703 6.4e-13 77.8 72 56.9
TAR628G0531 Trochodendron aralioides HOM05D000116 ORTHO05D000703 6.4e-13 77.8 59 64.4
CAN.G358.15 Capsicum annuum HOM05D000116 ORTHO05D000703 8.4e-13 77.4 55 70.9
Sc07g0000920 Simmondsia chinensis HOM05D000116 ORTHO05D000703 8.4e-13 77.4 47 78.7
CiPaw.08G136400 Carya illinoinensis HOM05D000116 ORTHO05D000703 1.1e-12 77.0 50 74.0
CSS0027383 Camellia sinensis var. sinensis HOM05D000116 ORTHO05D000703 1.4e-12 76.6 59 66.1
ClCG01G020060 Citrullus lanatus HOM05D007510 ORTHO05D000703 1.4e-12 76.6 47 78.7
CsaV3_6G046820 Cucumis sativus L. HOM05D000116 ORTHO05D000703 1.4e-12 76.6 47 78.7
EL10As8g23867 Beta vulgaris HOM05D000116 ORTHO05D000703 1.9e-12 76.3 47 76.6
SGA_v2.0_scaffold51G18792 Striga asiatica HOM05D000116 ORTHO05D000703 1.9e-12 76.3 54 68.5
CDE02G3390 Ceratophyllum demersum HOM05D000116 ORTHO05D000703 2.4e-12 75.9 47 74.5
FvH4_1g12420 Fragaria vesca HOM05D000116 ORTHO05D000703 2.4e-12 75.9 47 76.6
Manes.01G141700 Manihot esculenta HOM05D000116 ORTHO05D000703 2.4e-12 75.9 50 74.0
Eucgr.J02390 Eucalyptus grandis HOM05D000116 ORTHO05D000703 4.2e-12 75.1 47 74.5
Lj2g0025809 Lotus japonicus HOM05D000116 ORTHO05D000703 4.2e-12 75.1 62 64.5
Nitab4.5_0012525g0030 Nicotiana tabacum HOM05D000116 ORTHO05D000703 4.2e-12 75.1 54 68.5
SalBow8G1111 Salvia bowleyana HOM05D000116 ORTHO05D000703 4.2e-12 75.1 54 66.7
Atru.chr3.748 Acer truncatum HOM05D000116 ORTHO05D000703 5.4e-12 74.7 47 72.3
Cfa006927 Carpinus fangiana HOM05D000116 ORTHO05D000703 5.4e-12 74.7 47 76.6
Solyc02g084660.3 Solanum lycopersicum HOM05D000116 ORTHO05D000703 5.4e-12 74.7 54 70.4
Sopen02g029330 Solanum pennellii HOM05D000116 ORTHO05D000703 5.4e-12 74.7 54 70.4
PGSC0003DMG400003617 Solanum tuberosum HOM05D000116 ORTHO05D000703 5.4e-12 74.7 54 70.4
Haze_03822 Corylus avellana HOM05D000116 ORTHO05D000703 7.1e-12 74.3 47 76.6
MD02G1136700 Malus domestica HOM05D007510 ORTHO05D000703 7.1e-12 74.3 50 72.0
Potri.007G017300 Populus trichocarpa HOM05D000116 ORTHO05D000703 9.3e-12 73.9 47 74.5
Ah.02g124800 Amaranthus hybridus HOM05D000116 ORTHO05D000703 1.2e-11 73.6 47 72.3
ATR0661G034 Amborella trichopoda HOM05D000116 ORTHO05D000703 1.2e-11 73.6 62 62.9
Sabra07G0014700 Salix brachista HOM05D000116 ORTHO05D000703 1.2e-11 73.6 47 74.5
FAN28G2971 Fragaria x ananassa HOM05D007510 ORTHO05D009587 1.6e-11 73.2 47 74.5
Hund16468 Selenicereus undatus HOM05D000116 ORTHO05D000703 1.6e-11 73.2 47 72.3
unitig_0.g470 Utricularia gibba HOM05D000116 ORTHO05D000703 1.6e-11 73.2 54 66.7
Glyma.01G170900 Glycine max HOM05D000116 ORTHO05D000703 2.1e-11 72.8 47 72.3
Glyma.11G072200 Glycine max HOM05D000116 ORTHO05D000703 2.1e-11 72.8 47 72.3
Psat2g157080 Pisum sativum HOM05D000116 ORTHO05D000703 2.7e-11 72.4 47 72.3
Os02g0646400 Oryza sativa ssp. japonica HOM05D000116 ORTHO05D000703 4.6e-11 71.6 59 57.6
QL06p034553 Quercus lobata HOM05D000116 ORTHO05D000703 4.6e-11 71.6 47 72.3
Sed0022706 Sechium edule HOM05D000116 ORTHO05D000703 4.6e-11 71.6 47 76.6
Ca_24879_v3 Cicer arietinum L. HOM05D000116 ORTHO05D000703 7.9e-11 70.9 47 72.3
Lalb_Chr16g0377711 Lupinus albus HOM05D000116 ORTHO05D000703 7.9e-11 70.9 47 74.5
Peaxi162Scf01274g00011 Petunia axillaris HOM05D000116 ORTHO05D000703 7.9e-11 70.9 47 74.5
TWI09G0031 Tripterygium wilfordii HOM05D000116 ORTHO05D000703 7.9e-11 70.9 47 72.3
GSVIVG01018843001 Vitis vinifera HOM05D000116 ORTHO05D000703 7.9e-11 70.9 46 71.7
Medtr5g021090 Medicago truncatula HOM05D000116 ORTHO05D000703 1.0e-10 70.5 47 70.2
Zm00001eb248840 Zea mays HOM05D000116 ORTHO05D000703 1.0e-10 70.5 47 70.2
Phvul.002G166500 Phaseolus vulgaris HOM05D000116 ORTHO05D000703 1.3e-10 70.1 47 68.1
PGR102G3039 Punica granatum HOM05D000116 ORTHO05D000703 1.3e-10 70.1 46 76.1
Gohir.A10G097300 Gossypium hirsutum HOM05D000116 ORTHO05D000703 1.8e-10 69.7 54 64.8
VMungo1215G3204 Vigna mungo HOM05D000116 ORTHO05D000703 1.8e-10 69.7 47 68.1
arahy.Tifrunner.gnm1.ann1.BSM8HV Arachis hypogaea HOM05D000116 ORTHO05D000703 2.3e-10 69.3 47 70.2
CANSAT01G3034 Cannabis sativa HOM05D000116 ORTHO05D000703 2.3e-10 69.3 47 68.1
THA.LOC104821313 Tarenaya hassleriana HOM05D000116 ORTHO05D000703 2.3e-10 69.3 51 62.7
HanXRQChr14g0441541 Helianthus annuus HOM05D000116 ORTHO05D000703 3.0e-10 68.9 48 70.8
CANSAT01G0509 Cannabis sativa HOM05D000116 ORTHO05D000703 3.9e-10 68.6 47 68.1
Duzib187G0705 Durio zibethinus HOM05D000116 ORTHO05D000703 3.9e-10 68.6 47 68.1
Gorai.011G099900 Gossypium raimondii HOM05D000116 ORTHO05D000703 5.1e-10 68.2 47 66.0
arahy.Tifrunner.gnm1.ann1.HTI97C Arachis hypogaea HOM05D000116 ORTHO05D000703 8.7e-10 67.4 73 52.1
Ciclev10026749m.g Citrus clementina HOM05D000116 ORTHO05D000703 8.7e-10 67.4 47 66.0
COL.COLO4_21981 Corchorus olitorius HOM05D000116 ORTHO05D000703 8.7e-10 67.4 47 68.1
DCAR_025985 Daucus carota HOM05D000116 ORTHO05D000703 8.7e-10 67.4 54 61.1
Lsat_1_v5_gn_2_78261 Lactuca sativa HOM05D000116 ORTHO05D000703 8.7e-10 67.4 48 66.7
Thecc.01G024900 Theobroma cacao HOM05D000116 ORTHO05D000703 8.7e-10 67.4 47 68.1
TPR.G351 Trifolium pratense HOM05D000116 ORTHO05D000703 8.7e-10 67.4 71 54.9
Carub.0002s2426 Capsella rubella HOM05D000116 ORTHO05D000703 1.1e-09 67.0 47 68.1
BcaNung04507 Brassica carinata HOM05D000116 ORTHO05D000703 1.9e-09 66.2 47 68.1
BcaNung05275 Brassica carinata HOM05D000116 ORTHO05D000703 1.9e-09 66.2 47 68.1
BcaNung05279 Brassica carinata HOM05D000116 ORTHO05D000703 1.9e-09 66.2 47 68.1
C09p11910 Brassica napus HOM05D000116 ORTHO05D000703 1.9e-09 66.2 47 68.1
Gohir.D10G090900 Gossypium hirsutum HOM05D000116 ORTHO05D000703 1.9e-09 66.2 47 63.8
Sp2g30360 Schrenkiella parvula HOM05D000116 ORTHO05D000703 2.5e-09 65.9 47 68.1
A09p10050 Brassica napus HOM05D000116 ORTHO05D000703 4.3e-09 65.1 47 66.0
Aa31LG1G14850 Aethionema arabicum HOM05D000116 ORTHO05D000703 5.6e-09 64.7 47 68.1
AL2G37570 Arabidopsis lyrata HOM05D000116 ORTHO05D000703 5.6e-09 64.7 47 66.0
AT1G77370 Arabidopsis thaliana HOM05D000116 ORTHO05D000703 5.6e-09 64.7 47 66.0
BolC9t54079H Brassica oleracea HOM05D000116 ORTHO05D000703 7.4e-09 64.3 46 67.4
vmacro21902 Vaccinium macrocarpon HOM05D000116 ORTHO05D000703 7.4e-09 64.3 87 47.1
CARHR070850 Cardamine hirsuta HOM05D000116 ORTHO05D000703 9.6e-09 63.9 50 64.0
BraA09t36648Z Brassica rapa HOM05D000116 ORTHO05D000703 1.6e-08 63.2 46 65.2
AagrBONN_evm.TU.Sc2ySwM_362.2262 Anthoceros agrestis HOM05D000116 ORTHO05D000703 2.1e-08 62.8 47 68.1
ECA238G4514 Erigeron canadensis HOM05D000116 ORTHO05D000703 2.1e-08 62.8 47 63.8
Thhalv10005112m.g Eutrema salsugineum HOM05D000116 ORTHO05D000703 1.4e-07 60.1 50 64.0
CBR_g18876 Chara braunii HOM05D000116 ORTHO05D000703 3.1e-07 58.9 47 63.8
HanXRQChr07g0191291 Helianthus annuus HOM05D000116 ORTHO05D000703 5.3e-07 58.2 48 58.3
THA.LOC104811005 Tarenaya hassleriana HOM05D000116 ORTHO05D000703 5.3e-07 58.2 59 55.9
Ca_02145_v3 Cicer arietinum L. HOM05D000116 ORTHO05D000703 9.0e-07 57.4 54 53.7
BcaB05g22845 Brassica carinata HOM05D000116 ORTHO05D000703 1.2e-06 57.0 57 56.1
ClCG06G013850 Citrullus lanatus HOM05D000116 ORTHO05D000703 1.2e-06 57.0 50 58.0
Nn5g28750 Nelumbo nucifera HOM05D000116 ORTHO05D000703 1.5e-06 56.6 54 55.6
CsaV3_1G032050 Cucumis sativus L. HOM05D000116 ORTHO05D000703 2.0e-06 56.2 50 56.0
Thecc.09G191800 Theobroma cacao HOM05D000116 ORTHO05D000703 2.0e-06 56.2 59 54.2
Migut.K00226 Erythranthe guttata HOM05D000116 ORTHO05D000703 2.6e-06 55.8 48 60.4
PGR044G0943 Punica granatum HOM05D000116 ORTHO05D000703 2.6e-06 55.8 45 62.2
MD16G1241300 Malus domestica HOM05D000116 ORTHO05D000703 3.4e-06 55.5 58 53.4
Prupe.1G068000 Prunus persica HOM05D000116 ORTHO05D000703 3.4e-06 55.5 58 56.9
vmacro13100 Vaccinium macrocarpon HOM05D000116 ORTHO05D000703 3.4e-06 55.5 61 49.2
Lj6g0003697 Lotus japonicus HOM05D000116 ORTHO05D000703 4.5e-06 55.1 54 51.9
SEGI_00205 Sequoiadendron giganteum HOM05D000116 ORTHO05D000703 4.5e-06 55.1 44 59.1
A02p06270 Brassica napus HOM05D000116 ORTHO05D000703 5.8e-06 54.7 54 55.6
BNapus_Darmor_BZH_scaffold_38p01570 Brassica napus HOM05D000116 ORTHO05D000703 5.8e-06 54.7 54 55.6
BraA02t05575Z Brassica rapa HOM05D000116 ORTHO05D000703 5.8e-06 54.7 54 55.6
COL.COLO4_30867 Corchorus olitorius HOM05D000116 ORTHO05D000703 5.8e-06 54.7 50 54.0
BcaB08g36504 Brassica carinata HOM05D000116 ORTHO05D000703 7.6e-06 54.3 59 54.2
Sed0009975 Sechium edule HOM05D000116 ORTHO05D000703 7.6e-06 54.3 33 75.8
SGA_v2.0_scaffold17G07946 Striga asiatica HOM05D000116 ORTHO05D000703 7.6e-06 54.3 48 58.3


User provided reference genes

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