Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G5704 Papaver somniferum HOM05D006363 ORTHO05D007920 3.3e-119 431.8 226 100.0
PSO478G1739 Papaver somniferum HOM05D006363 ORTHO05D007920 3.7e-107 391.7 226 91.2
Nn6g34197 Nelumbo nucifera HOM05D006363 ORTHO05D007920 4.3e-71 271.9 222 68.5
Aqoxy7G00395 Aquilegia oxysepala HOM05D006363 ORTHO05D007920 5.6e-71 271.6 222 66.2
Dinv28459 Davidia involucrata HOM05D006363 ORTHO05D007920 8.1e-70 267.7 219 66.2
Lsat_1_v5_gn_2_133820 Lactuca sativa HOM05D006363 ORTHO05D007920 9.0e-69 264.2 222 63.1
GSVIVG01010552001 Vitis vinifera HOM05D006363 ORTHO05D007920 9.9e-68 260.8 221 65.6
ECA238G0548 Erigeron canadensis HOM05D006363 ORTHO05D007920 1.7e-67 260.0 215 64.7
HanXRQChr14g0462221 Helianthus annuus HOM05D006363 ORTHO05D007920 2.2e-67 259.6 220 65.5
Rhsim09G0197500 Rhododendron simsii HOM05D006363 ORTHO05D007920 6.4e-67 258.1 215 63.7
vmacro09843 Vaccinium macrocarpon HOM05D006363 ORTHO05D007920 8.4e-67 257.7 215 62.3
Lj8C25T12 Lonicera japonica HOM05D006363 ORTHO05D007920 1.1e-66 257.3 215 65.1
Oeu062762.2 Olea europaea HOM05D006363 ORTHO05D007920 3.2e-66 255.8 227 62.6
Peaxi162Scf00915g00018 Petunia axillaris HOM05D006363 ORTHO05D007920 3.2e-66 255.8 212 64.2
PGSC0003DMG400014325 Solanum tuberosum HOM05D006363 ORTHO05D007920 3.2e-66 255.8 212 66.5
AUR62016007 Chenopodium quinoa HOM05D006363 ORTHO05D007920 5.5e-66 255.0 212 62.7
AUR62021214 Chenopodium quinoa HOM05D006363 ORTHO05D007920 9.3e-66 254.2 218 61.0
Migut.F01133 Erythranthe guttata HOM05D006363 ORTHO05D007920 9.3e-66 254.2 218 61.9
Sopen03g004810 Solanum pennellii HOM05D006363 ORTHO05D007920 1.2e-65 253.8 222 63.5
TPR.G14326 Trifolium pratense HOM05D006363 ORTHO05D007920 1.6e-65 253.4 226 59.7
MBI04_g04731_MAGBIO Magnolia biondii HOM05D006363 ORTHO05D007920 2.1e-65 253.1 216 63.9
Solyc03g025990.1 Solanum lycopersicum HOM05D006363 ORTHO05D007920 2.1e-65 253.1 222 63.5
Nitab4.5_0001508g0030 Nicotiana tabacum HOM05D006363 ORTHO05D007920 4.6e-65 251.9 212 65.6
Nitab4.5_0000716g0210 Nicotiana tabacum HOM05D006363 ORTHO05D007920 6.0e-65 251.5 212 66.5
Duzib205G1779 Durio zibethinus HOM05D006363 ORTHO05D007920 7.9e-65 251.1 215 62.3
Psat6g200600 Pisum sativum HOM05D006363 ORTHO05D007920 1.0e-64 250.8 219 61.2
MSTRG.8448 Avicennia marina HOM05D006363 ORTHO05D007920 1.3e-64 250.4 219 62.6
Ciclev10007013m.g Citrus clementina HOM05D006363 ORTHO05D007920 1.3e-64 250.4 219 62.1
Thhalv10015742m.g Eutrema salsugineum HOM05D006363 ORTHO05D007920 1.3e-64 250.4 218 63.8
THA.LOC104811988 Tarenaya hassleriana HOM05D006363 ORTHO05D007920 1.3e-64 250.4 226 61.5
FvH4_7g29240 Fragaria vesca HOM05D006363 ORTHO05D007920 1.8e-64 250.0 226 59.7
FAN06G3928 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.8e-64 250.0 226 59.7
COL.COLO4_14288 Corchorus olitorius HOM05D006363 ORTHO05D007920 2.3e-64 249.6 215 61.9
FAN06G3284 Fragaria x ananassa HOM05D006363 ORTHO05D007920 3.0e-64 249.2 226 59.7
Medtr1g100753 Medicago truncatula HOM05D006363 ORTHO05D007920 3.9e-64 248.8 226 58.8
Gohir.D12G260100 Gossypium hirsutum HOM05D006363 ORTHO05D007920 5.1e-64 248.4 215 61.4
CSS0028509 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 6.7e-64 248.1 215 64.7
Gorai.008G278600 Gossypium raimondii HOM05D006363 ORTHO05D007920 6.7e-64 248.1 215 60.9
Thecc.03G174500 Theobroma cacao HOM05D006363 ORTHO05D007920 6.7e-64 248.1 215 59.5
Gohir.A12G258900 Gossypium hirsutum HOM05D006363 ORTHO05D007920 8.7e-64 247.7 215 60.9
CSS0002932 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 1.1e-63 247.3 215 64.7
FAN10G0438 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.5e-63 246.9 226 58.8
PGR042G3170 Punica granatum HOM05D006363 ORTHO05D007920 1.5e-63 246.9 228 59.2
Glyma.10G237500 Glycine max HOM05D006363 ORTHO05D007920 3.3e-63 245.7 220 59.5
Phvul.007G068100 Phaseolus vulgaris HOM05D006363 ORTHO05D007920 3.3e-63 245.7 213 62.0
Sabra15G0151200 Salix brachista HOM05D006363 ORTHO05D007920 3.3e-63 245.7 215 60.5
FAN03G1027 Fragaria x ananassa HOM05D006363 ORTHO05D007920 4.3e-63 245.4 226 58.8
Prupe.2G292400 Prunus persica HOM05D006363 ORTHO05D007920 4.3e-63 245.4 222 59.9
RcHm_v2.0_Chr1g0376991 Rosa chinensis HOM05D006363 ORTHO05D007920 4.3e-63 245.4 226 58.8
TWI39G0139 Tripterygium wilfordii HOM05D006363 ORTHO05D007920 4.3e-63 245.4 215 60.9
TAR375G0304 Trochodendron aralioides HOM05D006363 ORTHO05D007920 5.6e-63 245.0 199 67.3
BcaC01g06171 Brassica carinata HOM05D006363 ORTHO05D007920 7.4e-63 244.6 226 60.2
Atru.chr1.482 Acer truncatum HOM05D006363 ORTHO05D007920 9.6e-63 244.2 216 63.4
CARHR265110 Cardamine hirsuta HOM05D006363 ORTHO05D007920 9.6e-63 244.2 215 62.3
Aa31LG3G8570 Aethionema arabicum HOM05D006363 ORTHO05D007920 1.3e-62 243.8 215 62.3
EL10Ac3g05667 Beta vulgaris HOM05D006363 ORTHO05D007920 1.3e-62 243.8 213 59.6
Ca_10782_v3 Cicer arietinum L. HOM05D006363 ORTHO05D007920 1.3e-62 243.8 215 59.5
Glyma.20G157100 Glycine max HOM05D006363 ORTHO05D007920 1.6e-62 243.4 220 59.1
Cc03_g13850 Coffea canephora HOM05D006363 ORTHO05D007920 2.8e-62 242.7 215 61.4
BolC3t14244H Brassica oleracea HOM05D006363 ORTHO05D007920 3.7e-62 242.3 226 59.3
BraA03t10870Z Brassica rapa HOM05D006363 ORTHO05D007920 3.7e-62 242.3 215 61.4
BcaB01g04190 Brassica carinata HOM05D006363 ORTHO05D007920 4.8e-62 241.9 226 59.7
MD01G1199000 Malus domestica HOM05D006363 ORTHO05D007920 6.2e-62 241.5 214 59.8
C03p18470 Brassica napus HOM05D006363 ORTHO05D007920 8.1e-62 241.1 226 59.3
QL09p014582 Quercus lobata HOM05D006363 ORTHO05D007920 8.1e-62 241.1 214 60.3
CiPaw.03G104700 Carya illinoinensis HOM05D006363 ORTHO05D007920 1.1e-61 240.7 215 60.5
Haze_13734 Corylus avellana HOM05D006363 ORTHO05D007920 1.1e-61 240.7 217 59.4
Sp6g14440 Schrenkiella parvula HOM05D006363 ORTHO05D007920 3.1e-61 239.2 226 60.2
VMungo0720G1872 Vigna mungo HOM05D006363 ORTHO05D007920 3.1e-61 239.2 219 58.4
Cfa008303 Carpinus fangiana HOM05D006363 ORTHO05D007920 5.3e-61 238.4 215 58.6
LjContig00238g0019616 Lotus japonicus HOM05D006363 ORTHO05D007920 5.3e-61 238.4 222 56.3
MELO3C006895.2 Cucumis melo HOM05D006363 ORTHO05D007920 1.2e-60 237.3 219 58.0
Cpa.g.sc107.33 Carica papaya HOM05D006363 ORTHO05D007920 1.5e-60 236.9 218 57.8
CANSAT21G0627 Cannabis sativa HOM05D006363 ORTHO05D007920 2.0e-60 236.5 220 59.5
MD07G1266800 Malus domestica HOM05D006363 ORTHO05D007920 2.0e-60 236.5 215 58.6
Carub.0008s1228 Capsella rubella HOM05D006363 ORTHO05D007920 3.4e-60 235.7 215 58.1
CANSAT21G2254 Cannabis sativa HOM05D006363 ORTHO05D007920 4.5e-60 235.3 220 59.1
AL8G26570 Arabidopsis lyrata HOM05D006363 ORTHO05D007920 5.8e-60 235.0 216 59.3
FAN03G1282 Fragaria x ananassa HOM05D006363 ORTHO05D007920 7.6e-60 234.6 226 58.0
Sed0019375 Sechium edule HOM05D006363 ORTHO05D007920 7.6e-60 234.6 215 59.5
Manes.07G111200 Manihot esculenta HOM05D006363 ORTHO05D007920 1.7e-59 233.4 222 57.2
CsaV3_3G016980 Cucumis sativus L. HOM05D006363 ORTHO05D007920 2.2e-59 233.0 221 57.0
Potri.015G140600 Populus trichocarpa HOM05D006363 ORTHO05D007920 2.9e-59 232.6 215 57.2
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 4.9e-59 231.9 202 61.9
unitig_60.g25545 Utricularia gibba HOM05D006363 ORTHO05D007920 6.5e-59 231.5 212 62.3
Lalb_Chr02g0140961 Lupinus albus HOM05D006363 ORTHO05D007920 1.9e-58 229.9 220 56.8
AT5G52190 Arabidopsis thaliana HOM05D006363 ORTHO05D007920 2.5e-58 229.6 216 57.9
Eucgr.A02801 Eucalyptus grandis HOM05D006363 ORTHO05D007920 4.2e-58 228.8 225 56.4
CAN.G947.11 Capsicum annuum HOM05D006363 ORTHO05D007920 7.1e-58 228.0 212 62.7
Zm00001eb428810 Zea mays HOM05D006363 ORTHO05D007920 7.1e-58 228.0 226 57.1
DCAR_018188 Daucus carota HOM05D006363 ORTHO05D007920 3.9e-56 222.2 215 54.4
Os04g0568600 Oryza sativa ssp. japonica HOM05D006363 ORTHO05D007920 9.6e-55 217.6 211 57.8
HPP92_021110 Vanilla planifolia HOM05D006363 ORTHO05D007920 2.6e-52 209.5 198 60.1
CDE04G1845 Ceratophyllum demersum HOM05D006363 ORTHO05D007920 4.5e-52 208.8 200 60.5
ATR0757G111 Amborella trichopoda HOM05D006363 ORTHO05D007920 2.1e-49 199.9 215 52.6
A03p15800 Brassica napus HOM05D006363 ORTHO05D007920 1.5e-47 193.7 155 64.5
Pp3c6_24270 Physcomitrium patens HOM05D006363 ORTHO05D007920 7.7e-44 181.4 215 46.0
SEGI_31787 Sequoiadendron giganteum HOM05D006363 ORTHO05D007920 2.1e-41 173.3 215 47.4
FAN01G1422 Fragaria x ananassa HOM05D006363 ORTHO05D007920 7.9e-41 171.4 226 45.6
SalBow2G2214 Salvia bowleyana HOM05D006363 ORTHO05D007920 3.9e-40 169.1 151 63.6
Sc25g0000440 Simmondsia chinensis HOM05D006363 ORTHO05D007920 3.7e-38 162.5 177 54.2
SMO367G0077 Selaginella moellendorffii HOM05D006363 ORTHO05D007920 2.4e-37 159.8 182 52.2
A08p37210 Brassica napus HOM05D006363 ORTHO05D007920 5.3e-29 132.1 123 59.3
Mapoly0047s0087 Marchantia polymorpha HOM05D006363 ORTHO05D007920 1.7e-22 110.5 154 42.9
BcaC01g06168 Brassica carinata HOM05D006363 ORTHO05D007920 2.8e-22 109.8 109 59.6
BcaC06g36545 Brassica carinata HOM05D006363 ORTHO05D007920 1.4e-21 107.5 86 61.6
Pp3c17_12800 Physcomitrium patens HOM05D006363 ORTHO05D007920 5.3e-21 105.5 317 29.0
TAR633G0106 Trochodendron aralioides HOM05D006363 ORTHO05D007920 5.0e-19 99.0 91 56.0
TAR291G0005 Trochodendron aralioides HOM05D006363 ORTHO05D007920 9.4e-18 94.7 71 66.2
TAR375G0495 Trochodendron aralioides HOM05D006363 ORTHO05D007920 9.4e-18 94.7 71 66.2
TAR624G1193 Trochodendron aralioides HOM05D006363 ORTHO05D007920 9.4e-18 94.7 71 66.2
TAR614G0003 Trochodendron aralioides HOM05D006363 ORTHO05D007920 4.7e-17 92.4 71 64.8
TAR633G1276 Trochodendron aralioides HOM05D006363 ORTHO05D007920 4.7e-17 92.4 71 64.8
TAR629G0450 Trochodendron aralioides HOM05D006363 ORTHO05D007920 8.0e-17 91.7 71 64.8
TAR383G0849 Trochodendron aralioides HOM05D003653 ORTHO05D004249 1.4e-16 90.9 71 63.4
BolC5t32613H Brassica oleracea HOM05D006363 ORTHO05D007920 6.8e-16 88.6 56 76.8
C05p38730 Brassica napus HOM05D006363 ORTHO05D007920 2.6e-15 86.7 56 75.0
TPR.G33086 Trifolium pratense HOM05D006363 ORTHO05D007920 2.8e-14 83.2 72 61.1
BcaC01g06167 Brassica carinata HOM05D006363 ORTHO05D007920 5.4e-13 79.0 45 80.0
Actinidia03116 Actinidia chinensis HOM05D006363 ORTHO05D007920 3.5e-12 76.3 109 45.9
BcaC05g27871 Brassica carinata HOM05D006363 ORTHO05D007920 6.8e-08 62.0 41 73.2


User provided reference genes

Program Settings