Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 2.1e-250 868.6 448 100.0
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 2.7e-242 841.6 448 97.1
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 5.6e-155 551.6 446 65.9
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 1.2e-152 543.9 374 73.8
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 2.6e-152 542.7 449 63.0
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 2.9e-151 539.3 446 64.8
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 3.2e-150 535.8 446 64.3
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 4.1e-150 535.4 374 71.4
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 2.1e-149 533.1 422 65.6
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 1.6e-146 523.5 431 62.2
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 2.1e-146 523.1 448 60.9
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 6.8e-145 518.1 447 60.4
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 6.4e-143 511.5 377 68.7
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 1.2e-141 507.3 408 62.5
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 2.1e-141 506.5 409 64.3
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 1.1e-139 500.7 377 64.5
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 2.5e-139 499.6 407 61.7
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 2.8e-138 496.1 434 59.4
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 1.1e-137 494.2 416 62.7
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 9.9e-136 487.6 421 58.9
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 9.9e-136 487.6 413 61.0
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 1.3e-135 487.3 410 61.5
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 2.9e-135 486.1 448 58.5
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 3.8e-135 485.7 439 59.0
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 1.1e-134 484.2 441 59.9
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 9.3e-134 481.1 449 58.1
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 1.6e-133 480.3 410 61.2
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 1.6e-133 480.3 376 62.5
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 2.7e-133 479.6 379 63.9
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 3.5e-133 479.2 380 62.9
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 7.8e-133 478.0 381 63.8
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 2.3e-132 476.5 433 57.5
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 5.1e-132 475.3 379 63.6
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 6.6e-132 474.9 449 57.2
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 6.6e-132 474.9 409 58.9
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 8.7e-132 474.6 411 60.1
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 1.5e-131 473.8 439 57.4
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.5e-131 473.8 452 57.3
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 9.6e-131 471.1 420 58.6
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 1.6e-130 470.3 394 60.9
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 1.8e-129 466.8 379 62.3
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 1.8e-129 466.8 410 59.3
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 3.1e-129 466.1 382 62.0
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 2.0e-128 463.4 409 58.9
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 3.8e-127 459.1 382 60.5
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 4.9e-127 458.8 416 59.4
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 8.4e-127 458.0 416 58.7
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 1.1e-126 457.6 418 57.9
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 1.1e-126 457.6 416 58.7
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 1.4e-126 457.2 377 59.2
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 6.0e-125 451.8 410 55.1
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 7.9e-125 451.4 376 59.3
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 3.0e-124 449.5 380 57.6
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 3.3e-123 446.0 382 60.5
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 3.3e-123 446.0 381 57.7
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 7.4e-123 444.9 383 57.2
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 9.6e-123 444.5 386 59.8
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 8.1e-122 441.4 382 56.3
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 5.8e-120 435.3 349 61.0
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 2.1e-117 426.8 383 56.4
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 1.3e-114 417.5 437 51.0
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 8.2e-114 414.8 451 49.4
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 1.8e-113 413.7 384 54.4
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 3.1e-113 412.9 384 54.7
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 6.9e-113 411.8 377 57.0
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 7.6e-112 408.3 384 54.4
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 7.6e-112 408.3 384 54.4
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 1.3e-111 407.5 387 53.5
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 4.9e-111 405.6 378 54.8
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 1.1e-110 404.4 387 53.5
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 1.9e-110 403.7 386 53.1
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 1.9e-110 403.7 384 53.4
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 2.5e-110 403.3 407 51.4
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 1.8e-108 397.1 378 54.0
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 3.1e-105 386.3 344 57.3
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 6.5e-103 378.6 341 57.8
AUR62029919 Chenopodium quinoa HOM05D007058 ORTHO05D009036 3.6e-101 372.9 304 60.5
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 1.8e-100 370.5 377 50.4
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 3.0e-100 369.8 377 50.4
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 3.8e-95 352.8 341 54.0
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 5.5e-94 349.0 392 48.5
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 2.8e-90 336.7 377 46.4
Rhsim08G0129700 Rhododendron simsii HOM05D007058 ORTHO05D009036 4.7e-85 319.3 262 61.1
Glyma.05G242000 Glycine max HOM05D007058 ORTHO05D009036 8.0e-85 318.5 305 54.4
FvH4_5g16720 Fragaria vesca HOM05D007058 ORTHO05D009036 5.2e-84 315.8 264 59.5
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 2.0e-83 313.9 375 42.7
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 4.4e-83 312.8 358 48.0
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 2.2e-82 310.5 413 42.1
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 2.4e-73 280.4 306 47.7
Gohir.D07G064300 Gossypium hirsutum HOM05D007058 ORTHO05D009036 1.2e-59 235.0 245 50.6
Os01g0516700 Oryza sativa ssp. japonica HOM05D007058 ORTHO05D009036 4.4e-59 233.0 302 43.7
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 3.2e-57 226.9 405 35.1
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 2.7e-56 223.8 387 37.0
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 2.2e-50 204.1 595 27.4
Glyma.08G049500 Glycine max HOM05D007058 ORTHO05D009036 3.6e-45 186.8 200 48.0
Zm00001eb132130 Zea mays HOM05D007058 ORTHO05D009036 1.0e-39 168.7 251 40.2
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 3.9e-39 166.8 116 69.0
CAN.G1074.8 Capsicum annuum HOM05D007058 ORTHO05D009036 8.9e-36 155.6 129 59.7
arahy.Tifrunner.gnm1.ann1.4SU3WD Arachis hypogaea HOM05D007058 ORTHO05D009036 2.1e-32 144.4 132 50.8
SalBow5G0499 Salvia bowleyana HOM05D007058 ORTHO05D010040 2.9e-26 124.0 133 52.6
Gorai.001G067800 Gossypium raimondii HOM05D007058 ORTHO05D009036 1.3e-23 115.2 80 70.0
SEGI_28231 Sequoiadendron giganteum HOM05D007058 ORTHO05D009036 2.3e-23 114.4 78 70.5
CAN.G169.6 Capsicum annuum HOM05D007058 ORTHO05D009036 3.3e-22 110.5 99 60.6
Cre12.g527950 Chlamydomonas reinhardtii HOM05D007058 ORTHO05D009036 1.1e-20 105.5 391 25.6
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 9.3e-17 92.4 81 56.8
Ah.11g045170 Amaranthus hybridus HOM05D007058 ORTHO05D009036 1.7e-15 88.2 78 55.1
AUR62029918 Chenopodium quinoa HOM05D007058 ORTHO05D009036 8.7e-15 85.9 78 52.6
Gohir.D07G064250 Gossypium hirsutum HOM05D007058 ORTHO05D009036 1.1e-14 85.5 61 68.9
BcaC08g46795 Brassica carinata HOM05D007058 ORTHO05D009036 1.5e-14 85.1 87 48.3
Rhsim08G0129900 Rhododendron simsii HOM05D007058 ORTHO05D009036 3.6e-13 80.5 65 63.1
arahy.Tifrunner.gnm1.ann1.MMR300 Arachis hypogaea HOM05D007058 ORTHO05D009036 4.2e-09 67.0 66 54.5
Rhsim08G0129800 Rhododendron simsii HOM05D007058 ORTHO05D021411 1.6e-08 65.1 37 81.1


User provided reference genes

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