Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G5479 Papaver somniferum HOM05D007044 ORTHO05D008981 2.1e-291 1005.0 513 100.0
PSO170G6074 Papaver somniferum HOM05D007044 ORTHO05D008981 1.5e-273 945.7 515 93.6
Aqoxy6G00095 Aquilegia oxysepala HOM05D007044 ORTHO05D008981 4.1e-170 602.1 513 62.2
TAR381G1118 Trochodendron aralioides HOM05D007044 ORTHO05D008981 5.0e-168 595.1 511 62.4
Cfa020928 Carpinus fangiana HOM05D007044 ORTHO05D008981 4.3e-159 565.5 520 57.9
Haze_19360 Corylus avellana HOM05D007044 ORTHO05D008981 8.1e-158 561.2 519 57.0
MBI03_g18677_MAGBIO Magnolia biondii HOM05D007044 ORTHO05D008981 4.0e-157 558.9 517 58.2
Ciclev10027575m.g Citrus clementina HOM05D007044 ORTHO05D008981 3.7e-155 552.4 504 59.9
TWI75G1760 Tripterygium wilfordii HOM05D007044 ORTHO05D008981 1.1e-154 550.8 502 58.0
Actinidia19938 Actinidia chinensis HOM05D007044 ORTHO05D008981 3.5e-153 545.8 523 56.8
Thecc.01G145800 Theobroma cacao HOM05D007044 ORTHO05D008981 4.6e-153 545.4 503 58.6
TPR.G16624 Trifolium pratense HOM05D007044 ORTHO05D008981 7.8e-153 544.7 504 59.3
Gorai.012G045900 Gossypium raimondii HOM05D007044 ORTHO05D008981 1.1e-151 540.8 503 57.7
Gohir.A05G375000 Gossypium hirsutum HOM05D007044 ORTHO05D008981 2.1e-150 536.6 503 56.9
Ca_09906_v3 Cicer arietinum L. HOM05D007044 ORTHO05D008981 1.8e-149 533.5 506 56.9
Medtr1g077040 Medicago truncatula HOM05D007044 ORTHO05D008981 2.4e-149 533.1 504 56.9
Psat6g111960 Pisum sativum HOM05D007044 ORTHO05D008981 4.0e-149 532.3 510 57.8
Duzib147G1221 Durio zibethinus HOM05D007044 ORTHO05D008981 6.8e-149 531.6 502 57.8
Hma1.2p1_0050F.1_g029110 Hydrangea macrophylla HOM05D007044 ORTHO05D008981 8.9e-149 531.2 511 55.8
Glyma.20G214500 Glycine max HOM05D007044 ORTHO05D008981 1.2e-148 530.8 519 55.7
Gohir.D04G040700 Gossypium hirsutum HOM05D007044 ORTHO05D008981 1.2e-148 530.8 503 56.7
vmacro05323 Vaccinium macrocarpon HOM05D007044 ORTHO05D008981 1.2e-148 530.8 503 57.1
GSVIVG01000252001 Vitis vinifera HOM05D007044 ORTHO05D008981 1.7e-147 526.9 516 57.4
Manes.13G154300 Manihot esculenta HOM05D007044 ORTHO05D008981 1.1e-146 524.2 506 57.9
AUR62000601 Chenopodium quinoa HOM05D007044 ORTHO05D008981 4.2e-146 522.3 507 56.0
VMungo0720G2193 Vigna mungo HOM05D007044 ORTHO05D008981 5.4e-146 521.9 524 54.8
Phvul.007G114400 Phaseolus vulgaris HOM05D007044 ORTHO05D008981 9.3e-146 521.2 519 54.1
Ah.02g118170 Amaranthus hybridus HOM05D007044 ORTHO05D008981 1.6e-145 520.4 504 58.5
Lalb_Chr06g0168751 Lupinus albus HOM05D007044 ORTHO05D008981 3.0e-144 516.2 509 54.8
MELO3C024642.2 Cucumis melo HOM05D007044 ORTHO05D008981 3.9e-144 515.8 502 56.4
arahy.Tifrunner.gnm1.ann1.H6ML7T Arachis hypogaea HOM05D007044 ORTHO05D008981 4.3e-143 512.3 509 54.4
PGR119G1191 Punica granatum HOM05D007044 ORTHO05D008981 2.8e-142 509.6 504 55.4
Lj5g0011072 Lotus japonicus HOM05D007044 ORTHO05D008981 3.6e-142 509.2 506 55.9
Sed0003346 Sechium edule HOM05D007044 ORTHO05D008981 1.1e-141 507.7 502 55.4
arahy.Tifrunner.gnm1.ann1.B8MN22 Arachis hypogaea HOM05D007044 ORTHO05D008981 1.8e-141 506.9 513 54.0
AUR62006952 Chenopodium quinoa HOM05D007044 ORTHO05D008981 1.8e-141 506.9 503 55.9
EL10Ac4g09721 Beta vulgaris HOM05D007044 ORTHO05D008981 3.1e-141 506.1 501 55.3
THA.LOC104827319 Tarenaya hassleriana HOM05D007044 ORTHO05D008981 6.9e-141 505.0 506 53.8
ATR1136G039 Amborella trichopoda HOM05D007044 ORTHO05D008981 7.6e-140 501.5 550 49.6
Carub.0005s2331 Capsella rubella HOM05D007044 ORTHO05D008981 1.7e-139 500.4 528 54.0
Sabra04G0082400 Salix brachista HOM05D007044 ORTHO05D008981 1.4e-138 497.3 476 57.8
AL5G37940 Arabidopsis lyrata HOM05D007044 ORTHO05D008981 7.1e-138 495.0 518 52.5
Dinv05984 Davidia involucrata HOM05D007044 ORTHO05D008981 7.1e-138 495.0 466 58.2
ClCG04G002800 Citrullus lanatus HOM05D007044 ORTHO05D008981 7.9e-137 491.5 528 53.6
Lj7A490G62 Lonicera japonica HOM05D007044 ORTHO05D008981 1.3e-136 490.7 511 55.0
AT3G56570 Arabidopsis thaliana HOM05D007044 ORTHO05D008981 1.9e-135 486.9 525 53.1
Sp5g05990 Schrenkiella parvula HOM05D007044 ORTHO05D008981 9.6e-135 484.6 510 52.9
HPP92_022004 Vanilla planifolia HOM05D007044 ORTHO05D008981 1.2e-132 477.6 515 52.0
Aa31LG10G11390 Aethionema arabicum HOM05D007044 ORTHO05D008981 4.6e-129 465.7 521 50.9
Os01g0879500 Oryza sativa ssp. japonica HOM05D007044 ORTHO05D008981 8.7e-128 461.5 521 51.1
SalBow6G1252 Salvia bowleyana HOM05D007044 ORTHO05D008981 3.3e-127 459.5 521 49.3
Lsat_1_v5_gn_2_40340 Lactuca sativa HOM05D007044 ORTHO05D008981 8.1e-126 454.9 506 50.8
Migut.F00913 Erythranthe guttata HOM05D007044 ORTHO05D008981 1.4e-125 454.1 524 48.3
SGA_v2.0_scaffold13G06483 Striga asiatica HOM05D007044 ORTHO05D008981 1.4e-125 454.1 515 50.1
FAN23G2791 Fragaria x ananassa HOM05D007044 ORTHO05D008981 1.2e-124 451.1 506 49.2
Nitab4.5_0001785g0040 Nicotiana tabacum HOM05D007044 ORTHO05D008981 1.2e-124 451.1 545 49.0
FAN26G2478 Fragaria x ananassa HOM05D007044 ORTHO05D008981 5.8e-124 448.7 506 49.2
CAN.G10.5 Capsicum annuum HOM05D007044 ORTHO05D008981 1.3e-123 447.6 508 50.2
HanXRQChr10g0285851 Helianthus annuus HOM05D007044 ORTHO05D008981 1.9e-122 443.7 452 53.8
Zm00001eb366280 Zea mays HOM05D007044 ORTHO05D008981 1.9e-122 443.7 520 50.4
BraA09t40398Z Brassica rapa HOM05D007044 ORTHO05D008981 1.6e-121 440.7 506 48.6
FAN19G0897 Fragaria x ananassa HOM05D007044 ORTHO05D008981 4.6e-121 439.1 506 48.0
Oeu063700.1 Olea europaea HOM05D007044 ORTHO05D008981 2.3e-120 436.8 564 44.3
FvH4_1g25860 Fragaria vesca HOM05D007044 ORTHO05D008981 5.1e-120 435.6 506 47.6
C08p31830 Brassica napus HOM05D007044 ORTHO05D008981 6.7e-120 435.3 507 49.1
CSS0017775 Camellia sinensis var. sinensis HOM05D007044 ORTHO05D008981 3.7e-118 429.5 427 54.6
SEGI_35790 Sequoiadendron giganteum HOM05D007044 ORTHO05D008981 1.8e-117 427.2 543 46.8
BcaC07g39965 Brassica carinata HOM05D007044 ORTHO05D008981 2.4e-117 426.8 508 48.2
BolC8t50802H Brassica oleracea HOM05D007044 ORTHO05D008981 5.3e-117 425.6 509 47.9
A09p49450 Brassica napus HOM05D007044 ORTHO05D008981 9.0e-117 424.9 495 48.5
BcaC07g40141 Brassica carinata HOM05D007044 ORTHO05D008981 3.8e-115 419.5 506 47.6
Nn3g20178 Nelumbo nucifera HOM05D007044 ORTHO05D008981 6.5e-115 418.7 408 58.3
unitig_61.g26193 Utricularia gibba HOM05D007044 ORTHO05D008981 6.3e-110 402.1 545 43.5
MD00G1030500 Malus domestica HOM05D007044 ORTHO05D008981 2.4e-109 400.2 515 45.4
CiPaw.15G185700 Carya illinoinensis HOM05D007044 ORTHO05D008981 5.5e-106 389.0 391 56.3
Rhsim10G0120300 Rhododendron simsii HOM05D007044 ORTHO05D008981 1.7e-102 377.5 393 53.2
Hma1.2p1_0050F.1_g029120 Hydrangea macrophylla HOM05D007044 ORTHO05D008981 2.8e-102 376.7 378 54.5
Sc16g0009910 Simmondsia chinensis HOM05D007044 ORTHO05D008981 1.4e-101 374.4 406 53.0
Potri.004G135700 Populus trichocarpa HOM05D007044 ORTHO05D008981 4.5e-100 369.4 384 55.2
Atru.chr3.1445 Acer truncatum HOM05D007044 ORTHO05D008981 5.0e-99 365.9 389 54.8
Hund07191 Selenicereus undatus HOM05D007044 ORTHO05D008981 7.2e-98 362.1 391 53.5
SMO169G0173 Selaginella moellendorffii HOM05D007044 ORTHO05D008981 1.8e-93 347.4 500 42.0
Thhalv10006013m.g Eutrema salsugineum HOM05D007044 ORTHO05D008981 2.4e-93 347.1 407 49.4
CARHR166680 Cardamine hirsuta HOM05D007044 ORTHO05D008981 7.7e-92 342.0 401 49.4
CsaV3_4G029950 Cucumis sativus L. HOM05D007044 ORTHO05D008981 3.6e-89 333.2 367 51.5
Prupe.4G288100 Prunus persica HOM05D007044 ORTHO05D008981 6.1e-89 332.4 406 48.5
ECA240G2444 Erigeron canadensis HOM05D007044 ORTHO05D008981 1.0e-88 331.6 378 50.0
Pp3c8_4410 Physcomitrium patens HOM05D007044 ORTHO05D008981 2.9e-83 313.5 556 37.4
Mapoly0010s0148 Marchantia polymorpha HOM05D007044 ORTHO05D008981 2.3e-80 303.9 736 31.1
QL10p037675 Quercus lobata HOM05D007044 ORTHO05D008981 1.4e-77 294.7 329 53.2
Eucgr.I00024 Eucalyptus grandis HOM05D007044 ORTHO05D008981 1.5e-71 274.6 315 50.8
CDE06G0802 Ceratophyllum demersum HOM05D003697 ORTHO05D005452 4.5e-68 263.1 304 47.7
Cpa.g.sc138.45 Carica papaya HOM05D007044 ORTHO05D008981 2.3e-67 260.8 195 67.7
Glyma.10G176100 Glycine max HOM05D007044 ORTHO05D008981 1.2e-65 255.0 295 51.2
QL10p037666 Quercus lobata HOM05D007044 ORTHO05D008981 1.4e-64 251.5 193 63.2
CDE06G2742 Ceratophyllum demersum HOM05D007044 ORTHO05D008981 7.0e-61 239.2 184 65.2
PGSC0003DMG400004247 Solanum tuberosum HOM05D007044 ORTHO05D008981 3.0e-59 233.8 195 57.9
AagrBONN_evm.TU.Sc2ySwM_368.1798 Anthoceros agrestis HOM05D007044 ORTHO05D008981 5.6e-58 229.6 397 37.8
RcHm_v2.0_Chr3g0485001 Rosa chinensis HOM05D007044 ORTHO05D008981 7.3e-58 229.2 229 50.7
PRCOL_00000171 Prasinoderma coloniale HOM05D007044 ORTHO05D008981 6.6e-35 152.9 379 30.6
MELO3C033209.2 Cucumis melo HOM05D007044 ORTHO05D008981 3.3e-34 150.6 169 53.3
MCO15G559 Micromonas commoda HOM05D007044 ORTHO05D008981 3.0e-27 127.5 342 28.4
FAN28G0850 Fragaria x ananassa HOM05D007044 ORTHO05D008981 5.1e-27 126.7 228 35.5
Cre07.g346418 Chlamydomonas reinhardtii HOM05D007044 ORTHO05D008981 2.8e-25 120.9 206 35.0
MCO07G433 Micromonas commoda HOM05D007044 ORTHO05D008981 3.6e-25 120.6 411 26.3
CBR_g30110 Chara braunii HOM05D007044 ORTHO05D008981 1.3e-22 112.1 180 38.3
MCO12G445 Micromonas commoda HOM05D007044 ORTHO05D008981 6.4e-22 109.8 391 26.6
arahy.Tifrunner.gnm1.ann1.8K57QZ Arachis hypogaea HOM05D001339 ORTHO05D008981 1.9e-18 98.2 125 44.0
Cpa.g.sc138.46 Carica papaya HOM05D007044 ORTHO05D008981 4.5e-15 87.0 62 64.5
Cre03.g164650 Chlamydomonas reinhardtii HOM05D007044 ORTHO05D008981 1.7e-14 85.1 314 25.8
Thhalv10015946m.g Eutrema salsugineum HOM05D005252 ORTHO05D006788 3.2e-13 80.9 411 25.8
C02p08920 Brassica napus HOM05D005252 ORTHO05D006788 7.1e-13 79.7 413 24.9
Pp3c22_6390 Physcomitrium patens HOM05D004224 ORTHO05D006437 9.3e-13 79.3 204 24.5
SMO351G0583 Selaginella moellendorffii HOM05D005656 ORTHO05D007094 9.3e-13 79.3 199 28.1
arahy.Tifrunner.gnm1.ann1.H6TAT4 Arachis hypogaea HOM05D006665 ORTHO05D008327 1.2e-12 79.0 56 62.5
Sp6g26990 Schrenkiella parvula HOM05D005252 ORTHO05D006788 1.6e-12 78.6 411 25.8
Carub.0006s1543 Capsella rubella HOM05D005252 ORTHO05D006788 2.1e-12 78.2 371 24.8
Mapoly0016s0035 Marchantia polymorpha HOM05D005656 ORTHO05D006437 6.0e-12 76.6 198 26.3
A02p04080 Brassica napus HOM05D005252 ORTHO05D006788 7.9e-12 76.3 349 26.9
AL6G28290 Arabidopsis lyrata HOM05D005252 ORTHO05D006788 1.3e-11 75.5 368 25.5
BraA02t05370Z Brassica rapa HOM05D005252 ORTHO05D006788 5.1e-11 73.6 350 26.0
CARHR195970 Cardamine hirsuta HOM05D005252 ORTHO05D006788 5.1e-11 73.6 415 24.6
BcaC03g18544 Brassica carinata HOM05D005252 ORTHO05D006788 6.7e-11 73.2 320 26.2
Ciclev10011537m.g Citrus clementina HOM05D005252 ORTHO05D006788 8.7e-11 72.8 373 25.2
MCO12G473 Micromonas commoda HOM05D005456 ORTHO05D006805 1.1e-10 72.4 196 30.1
EL10Ac4g08917 Beta vulgaris HOM05D005252 ORTHO05D006788 2.5e-10 71.2 434 24.4
BolC2t06801H Brassica oleracea HOM05D005252 ORTHO05D006788 2.5e-10 71.2 320 25.9
Manes.01G124000 Manihot esculenta HOM05D005252 ORTHO05D006788 9.6e-10 69.3 445 24.9
EL10Ac6g13252 Beta vulgaris HOM05D005456 ORTHO05D006805 2.8e-09 67.8 168 28.6
Zm00001eb347700 Zea mays HOM05D001443 ORTHO05D001352 2.8e-09 67.8 134 38.1
AagrBONN_evm.TU.Sc2ySwM_228.1763 Anthoceros agrestis HOM05D004224 ORTHO05D006437 4.8e-09 67.0 218 25.7
RcHm_v2.0_Chr3g0488621 Rosa chinensis HOM05D005252 ORTHO05D006788 4.8e-09 67.0 320 26.9
PRCOL_00004023 Prasinoderma coloniale HOM05D007044 ORTHO05D044099 6.2e-09 66.6 192 26.6
Actinidia28776 Actinidia chinensis HOM05D005252 ORTHO05D006788 1.4e-08 65.5 355 24.2
Ah.03g134770 Amaranthus hybridus HOM05D005456 ORTHO05D006805 1.4e-08 65.5 170 27.6
CSS0009455 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 1.8e-08 65.1 317 26.2
Pp3c3_30340 Physcomitrium patens HOM05D005656 ORTHO05D007094 2.4e-08 64.7 151 29.8
AUR62032826 Chenopodium quinoa HOM05D005456 ORTHO05D006805 3.1e-08 64.3 168 26.8
Duzib133G0566 Durio zibethinus HOM05D005252 ORTHO05D006788 6.9e-08 63.2 324 24.7
CSS0014125 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 9.0e-08 62.8 312 25.6
MD16G1067900 Malus domestica HOM05D005456 ORTHO05D006805 1.2e-07 62.4 201 25.9
AagrBONN_evm.TU.Sc2ySwM_117.735 Anthoceros agrestis HOM05D004224 ORTHO05D006437 2.0e-07 61.6 196 25.0
FvH4_1g27420 Fragaria vesca HOM05D005252 ORTHO05D006788 2.0e-07 61.6 511 24.3
Pp3c10_18400 Physcomitrium patens HOM05D005656 ORTHO05D007094 2.0e-07 61.6 151 31.1
Hund25214 Selenicereus undatus HOM05D005456 ORTHO05D006805 2.6e-07 61.2 169 27.2
THA.LOC104820865 Tarenaya hassleriana HOM05D005252 ORTHO05D006788 2.6e-07 61.2 371 24.3
AUR62005833 Chenopodium quinoa HOM05D005456 ORTHO05D006805 3.4e-07 60.8 168 26.2
FAN28G2525 Fragaria x ananassa HOM05D005252 ORTHO05D006788 3.4e-07 60.8 319 26.3
QL03p069503 Quercus lobata HOM05D005456 ORTHO05D006805 4.5e-07 60.5 201 24.4
Rhsim12G0132700 Rhododendron simsii HOM05D005456 ORTHO05D006805 4.5e-07 60.5 198 24.7
FAN19G2162 Fragaria x ananassa HOM05D005252 ORTHO05D006788 5.8e-07 60.1 320 26.2
FAN28G2815 Fragaria x ananassa HOM05D005252 ORTHO05D006788 5.8e-07 60.1 319 26.0
TAR622G0726 Trochodendron aralioides HOM05D005252 ORTHO05D006788 5.8e-07 60.1 344 25.6
Ah.02g129440 Amaranthus hybridus HOM05D005456 ORTHO05D006805 7.6e-07 59.7 170 25.9
BolC8t52161H Brassica oleracea HOM05D005456 ORTHO05D006805 7.6e-07 59.7 202 26.7
Phvul.008G241400 Phaseolus vulgaris HOM05D005252 ORTHO05D006788 1.0e-06 59.3 319 23.2
PRCOL_00002664 Prasinoderma coloniale HOM05D035247 ORTHO05D001113 1.0e-06 59.3 229 25.3
MD17G1287300 Malus domestica HOM05D005252 ORTHO05D006788 1.3e-06 58.9 337 25.2
Pp3c4_19510 Physcomitrium patens HOM05D004224 ORTHO05D006437 1.3e-06 58.9 198 25.3
Prupe.3G014000 Prunus persica HOM05D005252 ORTHO05D006788 1.3e-06 58.9 320 25.0
PGSC0003DMG400016732 Solanum tuberosum HOM05D005252 ORTHO05D006788 1.3e-06 58.9 409 21.0
Cpa.g.sc178.38 Carica papaya HOM05D005252 ORTHO05D006788 1.7e-06 58.5 419 23.6
FAN07G2817 Fragaria x ananassa HOM05D005456 ORTHO05D006805 1.7e-06 58.5 202 25.7
FAN12G1233 Fragaria x ananassa HOM05D005456 ORTHO05D006805 1.7e-06 58.5 202 24.8
Hma1.2p1_0158F.1_g069575 Hydrangea macrophylla HOM05D005252 ORTHO05D006788 1.7e-06 58.5 320 25.3
AT1G14030 Arabidopsis thaliana HOM05D005456 ORTHO05D006805 2.2e-06 58.2 203 27.6
Sc04g0007920 Simmondsia chinensis HOM05D005456 ORTHO05D006805 2.2e-06 58.2 196 25.0
BolC2t06607H Brassica oleracea HOM05D005656 ORTHO05D005446 2.9e-06 57.8 328 25.0
TWI74G0077 Tripterygium wilfordii HOM05D005252 ORTHO05D006788 2.9e-06 57.8 320 24.7
Carub.0001s1372 Capsella rubella HOM05D005456 ORTHO05D006805 3.8e-06 57.4 199 27.6
BraA09t41618Z Brassica rapa HOM05D005456 ORTHO05D006805 4.9e-06 57.0 202 26.2
FAN17G1535 Fragaria x ananassa HOM05D005456 ORTHO05D006805 4.9e-06 57.0 202 25.2
HanXRQChr15g0476951 Helianthus annuus HOM05D005456 ORTHO05D006805 4.9e-06 57.0 171 28.1
Lalb_Chr06g0164091 Lupinus albus HOM05D005234 ORTHO05D006583 4.9e-06 57.0 302 20.9
MD01G1116500 Malus domestica HOM05D005234 ORTHO05D006583 4.9e-06 57.0 211 22.7
MCO05G022 Micromonas commoda HOM05D007044 ORTHO05D028567 4.9e-06 57.0 356 24.2
AL1G25870 Arabidopsis lyrata HOM05D005456 ORTHO05D006805 6.5e-06 56.6 203 27.6
A09p62550 Brassica napus HOM05D005456 ORTHO05D006805 6.5e-06 56.6 202 26.2
SEGI_32636 Sequoiadendron giganteum HOM05D005252 ORTHO05D006788 6.5e-06 56.6 306 25.5
C08p46110 Brassica napus HOM05D005456 ORTHO05D006805 8.4e-06 56.2 203 26.6
SMO180G0001 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 8.4e-06 56.2 191 24.6


User provided reference genes

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