Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G5466 Papaver somniferum HOM05D005711 ORTHO05D007125 0.0e+00 2118.6 1102 100.0
TAR633G2044 Trochodendron aralioides HOM05D005711 ORTHO05D007125 0.0e+00 1211.8 1128 59.7
Aqoxy7G01800 Aquilegia oxysepala HOM05D005711 ORTHO05D007125 0.0e+00 1119.4 1133 55.9
GSVIVG01033319001 Vitis vinifera HOM05D005711 ORTHO05D007125 0.0e+00 1092.8 1114 53.9
Nn7g36123 Nelumbo nucifera HOM05D005711 ORTHO05D007125 0.0e+00 1091.3 1110 55.8
Dinv24132 Davidia involucrata HOM05D005711 ORTHO05D007125 0.0e+00 1090.5 1111 54.0
CiPaw.09G035700 Carya illinoinensis HOM05D005711 ORTHO05D007125 3.3e-310 1068.5 1093 53.4
QL07p021385 Quercus lobata HOM05D005711 ORTHO05D007125 5.2e-303 1044.6 1124 52.0
Actinidia09354 Actinidia chinensis HOM05D005711 ORTHO05D007125 3.7e-301 1038.5 1100 52.8
Thecc.05G160700 Theobroma cacao HOM05D005711 ORTHO05D007125 4.1e-300 1035.0 1118 52.4
Cfa016851 Carpinus fangiana HOM05D005711 ORTHO05D007125 2.5e-297 1025.8 1058 53.3
Ciclev10004212m.g Citrus clementina HOM05D005711 ORTHO05D007125 5.2e-295 1018.1 1099 52.1
CSS0036262 Camellia sinensis var. sinensis HOM05D005711 ORTHO05D007125 4.4e-294 1015.0 1103 52.4
TWI53G1199 Tripterygium wilfordii HOM05D005711 ORTHO05D007125 7.0e-292 1007.7 1114 50.4
Gorai.002G230200 Gossypium raimondii HOM05D005711 ORTHO05D007125 5.9e-291 1004.6 1110 51.3
Prupe.8G156400 Prunus persica HOM05D005711 ORTHO05D007125 1.9e-289 999.6 1110 50.5
CANSAT80G2574 Cannabis sativa HOM05D005711 ORTHO05D007125 4.2e-289 998.4 1118 51.3
RcHm_v2.0_Chr7g0177161 Rosa chinensis HOM05D005711 ORTHO05D007125 6.1e-288 994.6 1110 50.4
MD05G1111300 Malus domestica HOM05D005711 ORTHO05D007125 3.0e-287 992.3 1120 50.2
RcHm_v2.0_Chr6g0247071 Rosa chinensis HOM05D005711 ORTHO05D007125 1.5e-286 989.9 1110 50.1
Gohir.A01G196500 Gossypium hirsutum HOM05D005711 ORTHO05D007125 2.6e-286 989.2 1104 50.6
FAN24G0778 Fragaria x ananassa HOM05D005711 ORTHO05D007125 8.3e-285 984.2 1123 50.2
FAN20G1206 Fragaria x ananassa HOM05D005711 ORTHO05D007125 4.1e-284 981.9 1110 50.4
FAN15G2563 Fragaria x ananassa HOM05D005711 ORTHO05D007125 4.5e-283 978.4 1110 50.1
Potri.006G054100 Populus trichocarpa HOM05D005711 ORTHO05D007125 4.5e-283 978.4 1108 51.0
FvH4_2g02670 Fragaria vesca HOM05D005711 ORTHO05D007125 7.8e-283 977.6 1104 50.1
Manes.09G026800 Manihot esculenta HOM05D005711 ORTHO05D007125 2.9e-282 975.7 1114 49.6
Haze_19901 Corylus avellana HOM05D005711 ORTHO05D007125 3.2e-276 955.7 1104 50.3
HanXRQChr13g0390691 Helianthus annuus HOM05D005711 ORTHO05D007125 3.6e-272 942.2 1107 48.1
Lj1g0025810 Lotus japonicus HOM05D005711 ORTHO05D007125 2.6e-270 936.0 1109 48.2
Migut.J01777 Erythranthe guttata HOM05D005711 ORTHO05D007125 2.9e-269 932.6 1116 46.3
Glyma.19G141900 Glycine max HOM05D005711 ORTHO05D007125 1.9e-268 929.9 1119 48.3
Lalb_Chr20g0110821 Lupinus albus HOM05D005711 ORTHO05D007125 3.5e-267 925.6 1092 48.3
THA.LOC104802271 Tarenaya hassleriana HOM05D005711 ORTHO05D007125 1.7e-266 923.3 1115 48.1
MSTRG.6443 Avicennia marina HOM05D005711 ORTHO05D007125 6.6e-266 921.4 1109 46.6
Medtr7g092130 Medicago truncatula HOM05D005711 ORTHO05D007125 2.1e-264 916.4 1115 46.5
Phvul.001G135900 Phaseolus vulgaris HOM05D005711 ORTHO05D007125 6.8e-263 911.4 1116 48.0
Sed0005844 Sechium edule HOM05D005711 ORTHO05D007125 9.9e-262 907.5 1119 48.3
VMungo1383G1829 Vigna mungo HOM05D005711 ORTHO05D007125 6.4e-261 904.8 1124 47.9
Cc06_g17000 Coffea canephora HOM05D005711 ORTHO05D007125 5.4e-260 901.7 1100 46.6
Carub.0005s2441 Capsella rubella HOM05D005711 ORTHO05D007125 2.7e-259 899.4 1105 47.6
PGR004G1983 Punica granatum HOM05D005711 ORTHO05D007125 1.0e-258 897.5 1020 49.8
Ca_08477_v3 Cicer arietinum L. HOM05D005711 ORTHO05D007125 3.0e-258 896.0 1113 46.0
arahy.Tifrunner.gnm1.ann1.FZG2LY Arachis hypogaea HOM05D005711 ORTHO05D007125 3.9e-258 895.6 1126 46.7
CsaV3_4G031330 Cucumis sativus L. HOM05D005711 ORTHO05D007125 6.6e-258 894.8 1115 47.0
AL5G39150 Arabidopsis lyrata HOM05D005711 ORTHO05D007125 8.6e-258 894.4 1102 47.4
Oeu018003.1 Olea europaea HOM05D005711 ORTHO05D007125 8.6e-258 894.4 1101 46.4
arahy.Tifrunner.gnm1.ann1.7A57YA Arachis hypogaea HOM05D005711 ORTHO05D007125 1.6e-256 890.2 1126 46.3
AT3G57570 Arabidopsis thaliana HOM05D005711 ORTHO05D007125 4.7e-256 888.6 1108 47.0
BraA09t40497Z Brassica rapa HOM05D005711 ORTHO05D007125 6.2e-256 888.3 1112 47.5
ECA248G2859 Erigeron canadensis HOM05D005711 ORTHO05D007125 5.2e-255 885.2 1072 46.7
A09p50460 Brassica napus HOM05D005711 ORTHO05D007125 1.5e-254 883.6 1109 47.5
Duzib093G0922 Durio zibethinus HOM05D005711 ORTHO05D007125 1.3e-253 880.6 1108 46.8
Psat3g071760 Pisum sativum HOM05D005711 ORTHO05D007125 7.1e-252 874.8 1119 45.1
ATR0605G192 Amborella trichopoda HOM05D005711 ORTHO05D007125 1.0e-250 870.9 1134 45.3
SGA_v2.0_scaffold69G23097 Striga asiatica HOM05D005711 ORTHO05D007125 1.7e-250 870.2 1120 43.5
AUR62026001 Chenopodium quinoa HOM05D005711 ORTHO05D007125 2.3e-250 869.8 1119 45.8
C08p33160 Brassica napus HOM05D005711 ORTHO05D007125 5.1e-250 868.6 1131 46.2
BolC8t50918H Brassica oleracea HOM05D005711 ORTHO05D007125 5.1e-250 868.6 1130 46.2
TPR.G3825 Trifolium pratense HOM05D005711 ORTHO05D007125 4.8e-248 862.1 1058 46.3
CDE10G0401 Ceratophyllum demersum HOM05D005711 ORTHO05D007125 6.2e-248 861.7 1123 46.7
Sc25g0005260 Simmondsia chinensis HOM05D005711 ORTHO05D007125 8.1e-248 861.3 1047 47.9
Lj2C380T2 Lonicera japonica HOM05D005711 ORTHO05D007125 4.2e-244 849.0 952 50.7
Gohir.D01G186800 Gossypium hirsutum HOM05D005711 ORTHO05D007125 6.0e-243 845.1 921 50.8
EL10Ac3g07027 Beta vulgaris HOM05D005711 ORTHO05D007125 1.5e-238 830.5 1125 44.0
Ah.13g076290 Amaranthus hybridus HOM05D005711 ORTHO05D007125 2.6e-238 829.7 1164 43.0
MELO3C009042.2 Cucumis melo HOM05D005711 ORTHO05D007125 1.7e-237 827.0 1155 43.7
Aa31LG10G12390 Aethionema arabicum HOM05D005711 ORTHO05D007125 1.9e-236 823.5 1103 45.7
Rhsim03G0016500 Rhododendron simsii HOM05D005711 ORTHO05D007125 1.2e-235 820.8 957 49.5
DCAR_009055 Daucus carota HOM05D005711 ORTHO05D007125 2.1e-235 820.1 1112 45.1
Cpa.g.sc92.19 Carica papaya HOM05D005711 ORTHO05D007125 7.9e-235 818.1 826 53.5
Lsat_1_v5_gn_5_162580 Lactuca sativa HOM05D005711 ORTHO05D007125 1.6e-232 810.4 1103 43.9
COL.COLO4_28164 Corchorus olitorius HOM05D005711 ORTHO05D007125 8.4e-229 798.1 986 48.2
FAN27G3244 Fragaria x ananassa HOM05D005711 ORTHO05D007125 3.9e-226 789.3 877 49.6
Sp5g05020 Schrenkiella parvula HOM05D005711 ORTHO05D007125 9.3e-220 768.1 975 46.6
Thhalv10005777m.g Eutrema salsugineum HOM05D005711 ORTHO05D007125 1.0e-210 738.0 920 47.1
Peaxi162Scf00650g00112 Petunia axillaris HOM05D005711 ORTHO05D007125 1.0e-210 738.0 1108 42.0
SalBow6G5243 Salvia bowleyana HOM05D005711 ORTHO05D007125 1.0e-210 738.0 1084 40.2
Atru.chr1.1044 Acer truncatum HOM05D005711 ORTHO05D007125 3.4e-206 723.0 769 52.0
BcaC07g40362 Brassica carinata HOM05D005711 ORTHO05D007125 3.8e-197 693.0 981 43.8
Eucgr.A02387 Eucalyptus grandis HOM05D005711 ORTHO05D007125 1.3e-181 641.3 732 50.0
vmacro22370 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 8.6e-173 612.1 801 44.9
CARHR167800 Cardamine hirsuta HOM05D005711 ORTHO05D007125 1.1e-167 595.1 760 45.4
FvH4_7g07942 Fragaria vesca HOM05D005711 ORTHO05D007125 1.3e-160 571.6 634 49.2
Rhsim03G0017400 Rhododendron simsii HOM05D005711 ORTHO05D007125 7.0e-159 565.8 929 40.2
Pp3c13_4080 Physcomitrium patens HOM05D005711 ORTHO05D007125 3.9e-157 560.1 1148 33.8
AUR62024408 Chenopodium quinoa HOM05D005711 ORTHO05D007125 3.1e-154 550.4 755 42.9
Nitab4.5_0002510g0050 Nicotiana tabacum HOM05D005711 ORTHO05D007125 4.6e-150 536.6 1092 34.9
Mapoly0169s0013 Marchantia polymorpha HOM05D005711 ORTHO05D007125 2.7e-134 484.2 1346 29.7
Rhsim03G0016100 Rhododendron simsii HOM05D005711 ORTHO05D007125 3.9e-109 400.6 467 50.5
ClCG04G000840 Citrullus lanatus HOM05D005711 ORTHO05D007125 8.7e-109 399.4 458 49.6
ClCG04G000850 Citrullus lanatus HOM05D005711 ORTHO05D007125 2.1e-107 394.8 685 38.1
vmacro07877 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 5.5e-87 327.0 342 50.6
Rhsim05G0135200 Rhododendron simsii HOM05D005711 ORTHO05D007125 7.2e-87 326.6 1241 27.2
FAN01G1916 Fragaria x ananassa HOM05D005711 ORTHO05D007125 2.3e-85 321.6 397 47.1
CARHR167810 Cardamine hirsuta HOM05D005711 ORTHO05D007125 3.5e-81 307.8 358 51.7
vmacro07878 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 1.5e-79 302.4 344 50.0
Rhsim03G0014800 Rhododendron simsii HOM05D005711 ORTHO05D007125 3.6e-78 297.7 592 35.6
Thecc.05G160900 Theobroma cacao HOM05D005711 ORTHO05D007125 1.9e-71 275.4 350 45.4
Solyc03g063700.1 Solanum lycopersicum HOM05D005711 ORTHO05D007125 2.0e-68 265.4 309 48.5
Dinv01671 Davidia involucrata HOM05D005711 ORTHO05D007125 1.4e-66 259.2 279 53.0
AUR62024409 Chenopodium quinoa HOM05D005711 ORTHO05D007125 4.5e-65 254.2 383 41.5
Nitab4.5_0005201g0010 Nicotiana tabacum HOM05D005711 ORTHO05D007125 5.9e-65 253.8 294 49.3
PGSC0003DMG402011958 Solanum tuberosum HOM05D005711 ORTHO05D007125 5.2e-61 240.7 288 49.7
Sabra06G0038400 Salix brachista HOM05D005711 ORTHO05D007125 3.6e-54 218.0 234 56.0
SEGI_36353 Sequoiadendron giganteum HOM05D005711 ORTHO05D007125 1.8e-53 215.7 261 48.7
SEGI_00323 Sequoiadendron giganteum HOM05D005711 ORTHO05D007125 3.4e-44 184.9 248 44.8
Lj2A380T68 Lonicera japonica HOM05D005711 ORTHO05D007125 1.7e-43 182.6 190 51.1
Cpa.g.sc92.20 Carica papaya HOM05D005711 ORTHO05D010193 1.7e-40 172.6 185 50.8
Rhsim03G0097300 Rhododendron simsii HOM05D005711 ORTHO05D007125 4.7e-38 164.5 374 32.6
PGSC0003DMG401011958 Solanum tuberosum HOM05D005711 ORTHO05D007125 6.8e-37 160.6 194 45.4
Hma1.2p1_0247F.1_g101860 Hydrangea macrophylla HOM05D005711 ORTHO05D007125 9.8e-36 156.8 152 52.6
COL.COLO4_28165 Corchorus olitorius HOM05D005711 ORTHO05D007125 1.4e-34 152.9 146 57.5
SMO356G0176 Selaginella moellendorffii HOM05D005711 ORTHO05D007125 4.3e-31 141.4 320 35.9
Nitab4.5_0010669g0020 Nicotiana tabacum HOM05D005711 ORTHO05D007125 2.8e-30 138.7 486 28.4
BcaC07g40361 Brassica carinata HOM05D005711 ORTHO05D007125 2.3e-29 135.6 138 53.6
CBR_g41427 Chara braunii HOM05D005711 ORTHO05D007125 1.0e-24 120.2 510 25.1
FvH4_7g07943 Fragaria vesca HOM05D005711 ORTHO05D007125 4.9e-19 101.3 118 44.1
FAN10G0844 Fragaria x ananassa HOM05D005711 ORTHO05D007125 4.9e-19 101.3 118 44.1
FAN06G4049 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.4e-18 99.8 118 44.1
FvH4_7g07941 Fragaria vesca HOM05D005711 ORTHO05D007125 1.6e-17 96.3 139 48.9
SalBow4G0785 Salvia bowleyana HOM05D005711 ORTHO05D007125 3.5e-17 95.1 139 41.7
Nitab4.5_0010669g0030 Nicotiana tabacum HOM05D005711 ORTHO05D007125 7.3e-15 87.4 165 35.2
Rhsim03G0016400 Rhododendron simsii HOM05D005711 ORTHO05D007125 1.8e-13 82.8 95 48.4
MCO09G818 Micromonas commoda HOM05D005711 ORTHO05D007125 2.4e-13 82.4 412 24.0
FAN26G1840 Fragaria x ananassa HOM05D005711 ORTHO05D007125 3.1e-13 82.0 136 38.2
CBR_g41430 Chara braunii HOM05D000019 ORTHO05D000048 4.9e-11 74.7 262 25.6
SEGI_21308 Sequoiadendron giganteum HOM05D005711 ORTHO05D007125 7.1e-10 70.9 84 39.3
CBR_g34900 Chara braunii HOM05D002414 ORTHO05D002531 6.0e-09 67.8 305 23.9
Hma1.2p1_0247F.1_g101870 Hydrangea macrophylla HOM05D005711 ORTHO05D007125 1.3e-06 60.1 95 44.2
arahy.Tifrunner.gnm1.ann1.N4MAIX Arachis hypogaea HOM05D005711 ORTHO05D007125 2.8e-06 58.9 62 51.6
FAN04G1389 Fragaria x ananassa HOM05D005711 ORTHO05D007125 2.8e-06 58.9 48 56.2


User provided reference genes

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