Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G5402 Papaver somniferum HOM05D004568 ORTHO05D005343 6.2e-211 737.3 389 100.0
PSO063G5818 Papaver somniferum HOM05D004568 ORTHO05D005343 1.4e-194 682.9 400 92.5
Aqoxy3G03818 Aquilegia oxysepala HOM05D004568 ORTHO05D005343 1.7e-59 234.2 390 48.7
CiPaw.05G118300 Carya illinoinensis HOM05D004568 ORTHO05D005343 1.9e-58 230.7 405 46.2
Cfa008803 Carpinus fangiana HOM05D004568 ORTHO05D005343 2.5e-58 230.3 414 43.7
Prupe.1G299900 Prunus persica HOM05D004568 ORTHO05D005343 8.2e-54 215.3 429 42.9
Hma1.2p1_1424F.1_g282720 Hydrangea macrophylla HOM05D004568 ORTHO05D005343 2.4e-53 213.8 383 43.3
Nn3g17622 Nelumbo nucifera HOM05D004568 ORTHO05D005343 3.1e-53 213.4 377 43.8
QL03p044380 Quercus lobata HOM05D004568 ORTHO05D005343 1.2e-52 211.5 410 42.2
Lj2g0022626 Lotus japonicus HOM05D004568 ORTHO05D005343 1.6e-52 211.1 388 39.9
Thecc.09G210800 Theobroma cacao HOM05D004568 ORTHO05D005343 7.7e-52 208.8 419 44.6
CiPaw.06G097400 Carya illinoinensis HOM05D004568 ORTHO05D005343 2.2e-51 207.2 406 45.1
TAR374G1393 Trochodendron aralioides HOM05D004568 ORTHO05D005343 1.9e-50 204.1 387 43.7
Potri.010G133600 Populus trichocarpa HOM05D004568 ORTHO05D005343 1.2e-49 201.4 415 43.9
Lalb_Chr10g0099511 Lupinus albus HOM05D004568 ORTHO05D005343 1.6e-49 201.1 405 43.2
Cpa.g.sc1.257 Carica papaya HOM05D004568 ORTHO05D005343 8.0e-49 198.7 398 38.9
Potri.008G109600 Populus trichocarpa HOM05D004568 ORTHO05D005343 8.0e-49 198.7 413 42.9
Potri.T062072 Populus trichocarpa HOM05D004568 ORTHO05D005343 8.0e-49 198.7 413 42.4
Atru.chr11.1442 Acer truncatum HOM05D004568 ORTHO05D005343 3.0e-48 196.8 409 39.1
Atru.chr11.1472 Acer truncatum HOM05D004568 ORTHO05D005343 3.0e-48 196.8 409 39.1
Duzib168G1705 Durio zibethinus HOM05D004568 ORTHO05D005343 3.0e-48 196.8 421 43.5
MD13G1052200 Malus domestica HOM05D004568 ORTHO05D005343 8.8e-48 195.3 398 39.7
MD16G1057700 Malus domestica HOM05D004568 ORTHO05D005343 1.2e-47 194.9 406 37.4
Hma1.2p1_1459F.1_g284900 Hydrangea macrophylla HOM05D004568 ORTHO05D005343 2.0e-47 194.1 379 38.5
Sabra10G0102200 Salix brachista HOM05D004568 ORTHO05D005343 2.6e-47 193.7 414 42.5
Thecc.02G315200 Theobroma cacao HOM05D004568 ORTHO05D005343 5.7e-47 192.6 396 38.6
VMungo1215G2036 Vigna mungo HOM05D004568 ORTHO05D005343 7.5e-47 192.2 425 41.4
RcHm_v2.0_Chr4g0436671 Rosa chinensis HOM05D004568 ORTHO05D005343 3.1e-45 186.8 419 41.1
Dinv16554 Davidia involucrata HOM05D004568 ORTHO05D005343 7.0e-45 185.7 388 45.1
COL.COLO4_34999 Corchorus olitorius HOM05D004568 ORTHO05D005343 2.7e-44 183.7 406 39.4
Ciclev10033580m.g Citrus clementina HOM05D004568 ORTHO05D005343 3.5e-44 183.3 403 43.2
Duzib251G0342 Durio zibethinus HOM05D004568 ORTHO05D005343 3.5e-44 183.3 412 42.5
FAN17G1809 Fragaria x ananassa HOM05D004568 ORTHO05D005343 1.0e-43 181.8 428 40.2
FAN07G0048 Fragaria x ananassa HOM05D004568 ORTHO05D005343 2.2e-43 180.6 420 40.2
CANSAT64G0418 Cannabis sativa HOM05D004568 ORTHO05D005343 3.8e-43 179.9 428 34.8
Duzib268G1242 Durio zibethinus HOM05D004568 ORTHO05D005343 6.5e-43 179.1 402 41.0
TWI79G0507 Tripterygium wilfordii HOM05D004568 ORTHO05D005343 1.1e-42 178.3 384 39.8
COL.COLO4_27716 Corchorus olitorius HOM05D004568 ORTHO05D005343 1.5e-42 177.9 401 38.2
FAN12G0798 Fragaria x ananassa HOM05D004568 ORTHO05D005343 1.9e-42 177.6 418 39.7
TWI75G0122 Tripterygium wilfordii HOM05D004568 ORTHO05D005343 1.9e-42 177.6 382 39.8
FAN22G1274 Fragaria x ananassa HOM05D004568 ORTHO05D005343 2.5e-42 177.2 419 40.6
FvH4_4g28580 Fragaria vesca HOM05D004568 ORTHO05D005343 9.4e-42 175.3 419 40.3
DCAR_026699 Daucus carota HOM05D004568 ORTHO05D005343 1.6e-41 174.5 402 39.6
Manes.06G076600 Manihot esculenta HOM05D004568 ORTHO05D005343 1.6e-41 174.5 405 39.3
Gorai.005G149300 Gossypium raimondii HOM05D004568 ORTHO05D005343 3.6e-41 173.3 410 42.7
Gohir.A03G108200 Gossypium hirsutum HOM05D004568 ORTHO05D005343 4.7e-41 172.9 409 42.1
MELO3C012188.2 Cucumis melo HOM05D004568 ORTHO05D005343 8.0e-41 172.2 398 43.5
TAR622G0675 Trochodendron aralioides HOM05D004568 ORTHO05D005343 8.0e-41 172.2 383 42.8
ClCG05G023290 Citrullus lanatus HOM05D004568 ORTHO05D005343 1.0e-40 171.8 400 41.8
Gohir.D02G133400 Gossypium hirsutum HOM05D004568 ORTHO05D005343 1.4e-40 171.4 411 42.6
CsaV3_5G033720 Cucumis sativus L. HOM05D004568 ORTHO05D005343 3.0e-40 170.2 406 42.9
TPR.G2653 Trifolium pratense HOM05D004568 ORTHO05D005343 8.8e-40 168.7 391 41.2
CSS0002717 Camellia sinensis var. sinensis HOM05D004568 ORTHO05D005343 1.5e-39 167.9 379 41.7
Manes.14G094400 Manihot esculenta HOM05D004568 ORTHO05D005343 2.0e-39 167.5 389 38.8
CSS0045744 Camellia sinensis var. sinensis HOM05D004568 ORTHO05D005343 2.6e-39 167.2 396 39.9
Sabra08G0083400 Salix brachista HOM05D004568 ORTHO05D005343 4.4e-39 166.4 393 37.7
Gohir.D13G217400 Gossypium hirsutum HOM05D004568 ORTHO05D005343 7.5e-39 165.6 416 39.7
Gorai.013G247900 Gossypium raimondii HOM05D004568 ORTHO05D005343 7.5e-39 165.6 416 39.7
Ca_05120_v3 Cicer arietinum L. HOM05D004568 ORTHO05D005343 1.3e-38 164.9 414 39.9
Gohir.A12G157850 Gossypium hirsutum HOM05D004568 ORTHO05D005343 2.8e-38 163.7 379 37.2
Gohir.A12G157951 Gossypium hirsutum HOM05D004568 ORTHO05D005343 2.8e-38 163.7 379 37.2
Lsat_1_v5_gn_3_58841 Lactuca sativa HOM05D004568 ORTHO05D005343 1.1e-37 161.8 399 41.4
Nitab4.5_0001554g0060 Nicotiana tabacum HOM05D004568 ORTHO05D005343 1.1e-37 161.8 393 35.9
Gohir.D12G160800 Gossypium hirsutum HOM05D004568 ORTHO05D005343 1.4e-37 161.4 390 36.4
Medtr6g472100 Medicago truncatula HOM05D004568 ORTHO05D005343 1.8e-37 161.0 383 40.7
Glyma.02G128700 Glycine max HOM05D004568 ORTHO05D005343 2.4e-37 160.6 421 34.4
Nitab4.5_0004681g0010 Nicotiana tabacum HOM05D004568 ORTHO05D005343 1.2e-36 158.3 387 36.2
Peaxi162Scf00208g00131 Petunia axillaris HOM05D004568 ORTHO05D005343 1.2e-36 158.3 386 36.3
Psat2g096280 Pisum sativum HOM05D004568 ORTHO05D005343 1.3e-35 154.8 390 40.8
Glyma.04G152800 Glycine max HOM05D004568 ORTHO05D005343 1.7e-35 154.5 415 34.2
Gohir.A13G213600 Gossypium hirsutum HOM05D004568 ORTHO05D005343 1.7e-35 154.5 427 39.6
Sed0022479 Sechium edule HOM05D004568 ORTHO05D005343 5.0e-35 152.9 387 37.5
GSVIVG01012027001 Vitis vinifera HOM05D004568 ORTHO05D005343 6.6e-35 152.5 242 46.7
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 1.1e-34 151.8 313 40.6
Migut.L01125 Erythranthe guttata HOM05D004568 ORTHO05D005343 1.1e-34 151.8 393 36.4
Sc04g0007050 Simmondsia chinensis HOM05D004568 ORTHO05D005343 1.9e-34 151.0 389 36.2
ECA246G3306 Erigeron canadensis HOM05D004568 ORTHO05D005343 3.3e-34 150.2 405 41.0
Gorai.008G173800 Gossypium raimondii HOM05D004568 ORTHO05D005343 3.3e-34 150.2 381 35.2
DCAR_030135 Daucus carota HOM05D004568 ORTHO05D005343 6.1e-33 146.0 363 35.5
TWI31G1373 Tripterygium wilfordii HOM05D004568 ORTHO05D005343 1.0e-32 145.2 371 36.1
Phvul.003G034500 Phaseolus vulgaris HOM05D004568 ORTHO05D005343 4.0e-32 143.3 323 38.7
Oeu033529.1 Olea europaea HOM05D004568 ORTHO05D005343 6.8e-32 142.5 384 35.9
PGR119G0824 Punica granatum HOM05D004568 ORTHO05D005343 4.4e-31 139.8 417 37.2
HanXRQChr17g0551111 Helianthus annuus HOM05D004568 ORTHO05D005343 5.7e-31 139.4 401 38.7
HanXRQChr17g0551511 Helianthus annuus HOM05D004568 ORTHO05D005343 5.7e-31 139.4 401 38.7
HanXRQChr12g0365221 Helianthus annuus HOM05D004568 ORTHO05D005343 9.8e-31 138.7 400 34.5
THA.LOC104824044 Tarenaya hassleriana HOM05D004568 ORTHO05D005343 1.7e-30 137.9 246 47.6
PGSC0003DMG400002843 Solanum tuberosum HOM05D004568 ORTHO05D005343 6.4e-30 136.0 378 35.4
SalBow8G3235 Salvia bowleyana HOM05D004568 ORTHO05D005343 1.2e-28 131.7 377 32.6
SalBow8G5572 Salvia bowleyana HOM05D004568 ORTHO05D005343 1.2e-28 131.7 377 32.6
Solyc04g005920.1 Solanum lycopersicum HOM05D004568 ORTHO05D005343 2.0e-28 131.0 382 35.6
Sopen04g001970 Solanum pennellii HOM05D004568 ORTHO05D005343 1.7e-27 127.9 381 34.6
Rhsim09G0116100 Rhododendron simsii HOM05D004568 ORTHO05D005343 3.0e-27 127.1 393 36.9
Rhsim09G0116400 Rhododendron simsii HOM05D004568 ORTHO05D005343 3.9e-27 126.7 389 36.8
EL10Ac6g14584 Beta vulgaris HOM05D004568 ORTHO05D005343 5.0e-27 126.3 387 32.8
HanXRQChr08g0214641 Helianthus annuus HOM05D004568 ORTHO05D005343 6.6e-27 125.9 388 33.8
HanXRQChr08g0214671 Helianthus annuus HOM05D004568 ORTHO05D005343 6.6e-27 125.9 388 33.8
Cc11_g11080 Coffea canephora HOM05D004568 ORTHO05D005343 1.9e-26 124.4 380 35.8
AUR62039200 Chenopodium quinoa HOM05D004568 ORTHO05D005343 1.6e-25 121.3 418 29.9
THA.LOC104805234 Tarenaya hassleriana HOM05D004568 ORTHO05D005343 8.0e-25 119.0 464 32.8
AUR62007782 Chenopodium quinoa HOM05D004568 ORTHO05D005343 2.3e-24 117.5 406 31.5
Lsat_1_v5_gn_8_37860 Lactuca sativa HOM05D004568 ORTHO05D005343 3.1e-24 117.1 385 36.6
A09p24900 Brassica napus HOM05D004568 ORTHO05D005343 4.0e-24 116.7 398 29.1
Eucgr.G02393 Eucalyptus grandis HOM05D004568 ORTHO05D005343 1.2e-23 115.2 441 35.6
PGSC0003DMG400007516 Solanum tuberosum HOM05D004568 ORTHO05D005343 7.5e-23 112.5 379 32.7
Ah.04g164810 Amaranthus hybridus HOM05D004568 ORTHO05D005343 1.3e-22 111.7 384 31.5
Solyc05g010450.1 Solanum lycopersicum HOM05D004568 ORTHO05D005343 1.7e-22 111.3 385 32.5
Sopen05g006240 Solanum pennellii HOM05D004568 ORTHO05D005343 1.7e-22 111.3 385 32.5
Haze_11818 Corylus avellana HOM05D004568 ORTHO05D005343 2.0e-20 104.4 234 37.6
SGA_v2.0_scaffold16G07859 Striga asiatica HOM05D004568 ORTHO05D005343 1.0e-19 102.1 204 36.8
BolC9t56047H Brassica oleracea HOM05D004568 ORTHO05D005343 1.3e-19 101.7 399 31.1
C09p31920 Brassica napus HOM05D004568 ORTHO05D005343 5.0e-19 99.8 399 30.8
BolC2t11302H Brassica oleracea HOM05D004568 ORTHO05D005343 6.6e-19 99.4 406 28.8
Haze_11819 Corylus avellana HOM05D004568 ORTHO05D005343 1.5e-18 98.2 103 56.3
SGA_v2.0_scaffold36G14507 Striga asiatica HOM05D004568 ORTHO05D005343 1.5e-18 98.2 254 33.5
BraA02t08408Z Brassica rapa HOM05D004568 ORTHO05D005343 1.9e-18 97.8 408 32.4
A06p42720 Brassica napus HOM05D004568 ORTHO05D005343 2.5e-18 97.4 222 34.7
BcaC04g21427 Brassica carinata HOM05D004568 ORTHO05D005343 3.3e-18 97.1 397 28.0
BraA06t27185Z Brassica rapa HOM05D004568 ORTHO05D005343 9.5e-18 95.5 222 35.6
arahy.Tifrunner.gnm1.ann1.35X7C5 Arachis hypogaea HOM05D004568 ORTHO05D005343 1.2e-17 95.1 419 29.1
BcaC04g21428 Brassica carinata HOM05D004568 ORTHO05D005343 1.6e-17 94.7 200 36.0
A02p33910 Brassica napus HOM05D004568 ORTHO05D005343 1.6e-17 94.7 245 39.6
Nitab4.5_0012448g0010 Nicotiana tabacum HOM05D004568 ORTHO05D005343 2.8e-17 94.0 276 37.7
Aa31LG2G6720 Aethionema arabicum HOM05D004568 ORTHO05D005343 4.7e-17 93.2 281 40.2
BraA09t38078Z Brassica rapa HOM05D004568 ORTHO05D005343 6.2e-17 92.8 230 34.3
Thhalv10004268m.g Eutrema salsugineum HOM05D004568 ORTHO05D005343 1.4e-16 91.7 245 40.0
BcaC03g17273 Brassica carinata HOM05D004568 ORTHO05D005343 1.5e-15 88.2 386 28.5
AUR62019434 Chenopodium quinoa HOM05D000052 ORTHO05D000046 1.5e-15 88.2 318 30.2
Actinidia37881 Actinidia chinensis HOM05D004568 ORTHO05D005343 9.8e-15 85.5 302 33.4
C07p34410 Brassica napus HOM05D004568 ORTHO05D005343 9.8e-15 85.5 221 34.4
BolC7t43969H Brassica oleracea HOM05D004568 ORTHO05D005343 9.8e-15 85.5 221 34.4
vmacro10495 Vaccinium macrocarpon HOM05D004568 ORTHO05D005343 9.8e-15 85.5 375 34.4
CDE04G2972 Ceratophyllum demersum HOM05D004568 ORTHO05D005343 1.3e-14 85.1 199 37.2
AL5G14100 Arabidopsis lyrata HOM05D004568 ORTHO05D005343 1.7e-14 84.7 251 37.5
unitig_747.g21193 Utricularia gibba HOM05D004568 ORTHO05D005343 1.7e-14 84.7 312 31.4
Sp2g14860 Schrenkiella parvula HOM05D004568 ORTHO05D005343 2.9e-14 84.0 424 30.2
arahy.Tifrunner.gnm1.ann1.Y3DNXR Arachis hypogaea HOM05D004568 ORTHO05D005343 4.1e-13 80.1 412 27.7
AT3G25590 Arabidopsis thaliana HOM05D004568 ORTHO05D005343 2.1e-12 77.8 441 27.9
Actinidia30170 Actinidia chinensis HOM05D004568 ORTHO05D005343 2.7e-12 77.4 96 62.5
BcaC06g33977 Brassica carinata HOM05D004568 ORTHO05D005343 1.3e-11 75.1 411 26.5
Ah.06g195100 Amaranthus hybridus HOM05D004568 ORTHO05D005343 5.1e-11 73.2 420 26.2
C02p52170 Brassica napus HOM05D004568 ORTHO05D005343 3.3e-10 70.5 382 26.7
Carub.0005s0337 Capsella rubella HOM05D004568 ORTHO05D005343 3.3e-10 70.5 214 36.9
SEGI_17788 Sequoiadendron giganteum HOM05D004568 ORTHO05D005343 3.6e-09 67.0 144 36.1
Ah.12g062580 Amaranthus hybridus HOM05D004568 ORTHO05D005343 8.1e-09 65.9 195 32.8
BcaB07g30266 Brassica carinata HOM05D004568 ORTHO05D005343 1.4e-08 65.1 415 26.0
CDE04G2720 Ceratophyllum demersum HOM05D004568 ORTHO05D005343 1.8e-08 64.7 72 63.9
ECA233G1390 Erigeron canadensis HOM05D004568 ORTHO05D005343 2.6e-07 60.8 255 28.6
BcaB07g30637 Brassica carinata HOM05D004568 ORTHO05D005343 3.4e-07 60.5 410 27.3
BcaC06g31131 Brassica carinata HOM05D004568 ORTHO05D005343 4.4e-07 60.1 236 35.2
Lj3P1023T52 Lonicera japonica HOM05D004568 ORTHO05D005343 4.4e-07 60.1 204 35.3


User provided reference genes

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