Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G5381 Papaver somniferum HOM05D007440 ORTHO05D009418 3.3e-144 515.0 252 100.0
PSO170G3813 Papaver somniferum HOM05D007440 ORTHO05D009418 2.7e-138 495.4 251 97.2
Lj9C701T14 Lonicera japonica HOM05D007440 ORTHO05D009418 3.0e-105 385.6 251 72.5
TAR381G0685 Trochodendron aralioides HOM05D007440 ORTHO05D009418 2.5e-104 382.5 252 71.0
CiPaw.03G017000 Carya illinoinensis HOM05D007440 ORTHO05D009418 3.6e-103 378.6 250 72.0
GSVIVG01036437001 Vitis vinifera HOM05D007440 ORTHO05D009418 8.1e-103 377.5 249 72.7
Thecc.08G172800 Theobroma cacao HOM05D007440 ORTHO05D009418 1.4e-102 376.7 250 72.8
Dinv41796 Davidia involucrata HOM05D007440 ORTHO05D009418 4.0e-102 375.2 250 71.2
Manes.18G121350 Manihot esculenta HOM05D007440 ORTHO05D009418 6.9e-102 374.4 250 70.8
Cfa008111 Carpinus fangiana HOM05D007440 ORTHO05D009418 2.6e-101 372.5 250 72.8
Nn1g02997 Nelumbo nucifera HOM05D007440 ORTHO05D009418 2.6e-101 372.5 250 69.6
FAN18G0056 Fragaria x ananassa HOM05D007440 ORTHO05D009418 1.7e-100 369.8 250 72.0
RcHm_v2.0_Chr7g0224381 Rosa chinensis HOM05D007440 ORTHO05D009418 2.9e-100 369.0 250 71.2
QL09p004054 Quercus lobata HOM05D007440 ORTHO05D009418 3.8e-100 368.6 250 70.4
FvH4_5g32910 Fragaria vesca HOM05D007440 ORTHO05D009418 2.4e-99 365.9 250 71.6
Prupe.1G546900 Prunus persica HOM05D007440 ORTHO05D009418 3.2e-99 365.5 250 70.8
ClCG11G008830 Citrullus lanatus HOM05D007440 ORTHO05D009418 7.1e-99 364.4 250 68.8
Cpa.g.sc21.56 Carica papaya HOM05D007440 ORTHO05D009418 9.3e-99 364.0 250 69.6
Actinidia29398 Actinidia chinensis HOM05D007440 ORTHO05D009418 1.6e-98 363.2 249 69.9
Solyc12g017690.3 Solanum lycopersicum HOM05D007440 ORTHO05D009418 1.6e-98 363.2 250 68.4
CSS0017361 Camellia sinensis var. sinensis HOM05D007440 ORTHO05D009418 2.1e-98 362.8 253 68.4
CsaV3_2G033090 Cucumis sativus L. HOM05D007440 ORTHO05D009418 2.7e-98 362.5 250 69.2
Duzib177G0102 Durio zibethinus HOM05D007440 ORTHO05D009418 3.5e-98 362.1 239 73.2
Gorai.009G265700 Gossypium raimondii HOM05D007440 ORTHO05D009418 4.6e-98 361.7 250 70.8
MELO3C008079.2 Cucumis melo HOM05D007440 ORTHO05D009418 6.0e-98 361.3 250 68.4
TWI23G1187 Tripterygium wilfordii HOM05D007440 ORTHO05D009418 6.0e-98 361.3 250 68.4
Gohir.D05G254100 Gossypium hirsutum HOM05D007440 ORTHO05D009418 1.0e-97 360.5 250 70.4
Sopen12g008470 Solanum pennellii HOM05D007440 ORTHO05D009418 1.3e-97 360.1 250 67.2
Hma1.2p1_0708F.1_g207100 Hydrangea macrophylla HOM05D007440 ORTHO05D009418 1.8e-97 359.8 250 67.2
Gohir.A05G252301 Gossypium hirsutum HOM05D007440 ORTHO05D009418 5.1e-97 358.2 250 69.6
Aqoxy6G00075 Aquilegia oxysepala HOM05D007440 ORTHO05D009418 6.7e-97 357.8 267 65.5
Glyma.13G000800 Glycine max HOM05D007440 ORTHO05D009418 4.3e-96 355.1 251 65.3
arahy.Tifrunner.gnm1.ann1.E07HZ8 Arachis hypogaea HOM05D007440 ORTHO05D009418 2.1e-95 352.8 250 66.4
arahy.Tifrunner.gnm1.ann1.YQ4984 Arachis hypogaea HOM05D007440 ORTHO05D009418 2.1e-95 352.8 250 66.4
MD15G1399400 Malus domestica HOM05D007440 ORTHO05D009418 4.8e-95 351.7 250 69.6
Sed0012539 Sechium edule HOM05D007440 ORTHO05D009418 8.1e-95 350.9 250 67.2
CDE05G2917 Ceratophyllum demersum HOM05D007440 ORTHO05D009418 1.4e-94 350.1 251 66.9
Haze_13927 Corylus avellana HOM05D007440 ORTHO05D009418 4.0e-94 348.6 234 72.6
Cc03_g16220 Coffea canephora HOM05D007440 ORTHO05D009418 6.9e-94 347.8 252 66.3
MBI03_g14514_MAGBIO Magnolia biondii HOM05D007440 ORTHO05D009418 9.0e-94 347.4 276 63.4
Potri.019G076200 Populus trichocarpa HOM05D007440 ORTHO05D009418 9.0e-94 347.4 253 66.8
Sabra19G0086600 Salix brachista HOM05D007440 ORTHO05D009418 9.0e-94 347.4 252 66.7
Atru.chr12.1704 Acer truncatum HOM05D007440 ORTHO05D009418 5.8e-93 344.7 250 66.0
CANSAT25G0816 Cannabis sativa HOM05D007440 ORTHO05D009418 1.3e-92 343.6 250 66.4
ATR1089G110 Amborella trichopoda HOM05D007440 ORTHO05D009418 3.8e-92 342.0 251 66.5
PGR031G3126 Punica granatum HOM05D007440 ORTHO05D009418 3.8e-92 342.0 249 67.5
Rhsim02G0174300 Rhododendron simsii HOM05D007440 ORTHO05D009418 4.9e-92 341.7 261 66.3
Lj3g0019924 Lotus japonicus HOM05D007440 ORTHO05D009418 6.4e-92 341.3 254 64.2
Oeu061891.1 Olea europaea HOM05D007440 ORTHO05D009418 3.2e-91 339.0 252 66.3
Phvul.011G216600 Phaseolus vulgaris HOM05D007440 ORTHO05D009418 1.2e-90 337.0 250 64.4
Lsat_1_v5_gn_1_25281 Lactuca sativa HOM05D007440 ORTHO05D009418 2.7e-90 335.9 262 63.0
Migut.N03008 Erythranthe guttata HOM05D007440 ORTHO05D009418 3.5e-90 335.5 252 64.3
SalBow6G1672 Salvia bowleyana HOM05D007440 ORTHO05D009418 2.5e-88 329.3 252 63.5
Psat7g227720 Pisum sativum HOM05D007440 ORTHO05D009418 3.3e-88 328.9 245 64.1
Medtr4g031180 Medicago truncatula HOM05D007440 ORTHO05D009418 5.6e-88 328.2 246 63.4
HanXRQChr02g0037061 Helianthus annuus HOM05D007440 ORTHO05D009418 1.3e-87 327.0 254 63.8
HPP92_004660 Vanilla planifolia HOM05D007440 ORTHO05D009418 2.8e-87 325.9 249 63.5
TPR.G34135 Trifolium pratense HOM05D007440 ORTHO05D009418 8.2e-87 324.3 245 64.5
Hund26630 Selenicereus undatus HOM05D007440 ORTHO05D009418 3.1e-86 322.4 251 63.3
THA.LOC104810378 Tarenaya hassleriana HOM05D007440 ORTHO05D009418 5.8e-85 318.2 250 59.2
Aa31LG4G9050 Aethionema arabicum HOM05D007440 ORTHO05D009418 6.5e-84 314.7 251 61.0
FAN04G2515 Fragaria x ananassa HOM05D007440 ORTHO05D009418 4.6e-82 308.5 250 61.6
Os10g0141900 Oryza sativa ssp. japonica HOM05D007440 ORTHO05D009418 2.2e-79 299.7 251 58.2
SGA_v2.0_scaffold19G08914 Striga asiatica HOM05D007440 ORTHO05D009418 3.7e-79 298.9 335 47.5
Ciclev10024582m.g Citrus clementina HOM05D007440 ORTHO05D009418 4.8e-79 298.5 250 60.8
Lalb_Chr17g0336871 Lupinus albus HOM05D007440 ORTHO05D009418 1.0e-73 280.8 259 55.6
Ca_12759_v3 Cicer arietinum L. HOM05D007440 ORTHO05D009418 2.0e-69 266.5 248 53.2
COL.COLO4_24615 Corchorus olitorius HOM05D007440 ORTHO05D009418 2.0e-69 266.5 187 69.0
RcHm_v2.0_Chr7g0230881 Rosa chinensis HOM05D007440 ORTHO05D009418 3.4e-69 265.8 181 68.5
PGSC0003DMG401002240 Solanum tuberosum HOM05D007440 ORTHO05D009418 7.9e-66 254.6 176 67.6
ECA247G2087 Erigeron canadensis HOM05D007440 ORTHO05D009418 1.1e-64 250.8 181 64.6
CSS0010463 Camellia sinensis var. sinensis HOM05D007440 ORTHO05D009418 9.7e-64 247.7 184 63.6
Nitab4.5_0000219g0040 Nicotiana tabacum HOM05D007440 ORTHO05D009418 3.7e-63 245.7 175 66.9
Nitab4.5_0006566g0010 Nicotiana tabacum HOM05D007440 ORTHO05D009418 1.8e-62 243.4 181 63.0
vmacro11039 Vaccinium macrocarpon HOM05D007440 ORTHO05D009418 2.6e-61 239.6 224 58.0
Pp3c17_10270 Physcomitrium patens HOM05D007440 ORTHO05D009418 2.9e-60 236.1 251 47.8
Eucgr.H00023 Eucalyptus grandis HOM05D007440 ORTHO05D009418 8.5e-60 234.6 165 64.2
Mapoly0046s0064 Marchantia polymorpha HOM05D007440 ORTHO05D009418 9.4e-59 231.1 250 46.8
DCAR_002184 Daucus carota HOM05D007440 ORTHO05D004363 2.1e-58 229.9 223 50.7
Zm00001eb026400 Zea mays HOM05D007440 ORTHO05D009418 9.1e-54 214.5 165 59.4
FAN08G1847 Fragaria x ananassa HOM05D007440 ORTHO05D009418 5.0e-52 208.8 141 70.2
Pp3c9_24070 Physcomitrium patens HOM05D007440 ORTHO05D009418 1.9e-51 206.8 252 42.5
SMO347G0497 Selaginella moellendorffii HOM05D007440 ORTHO05D009418 7.2e-51 204.9 223 47.5
CBR_g29696 Chara braunii HOM05D007440 ORTHO05D009418 4.0e-49 199.1 252 42.5
Atru.chr13.2417 Acer truncatum HOM05D007440 ORTHO05D009418 6.8e-49 198.4 162 61.7
Peaxi162Scf00017g00002 Petunia axillaris HOM05D007440 ORTHO05D009418 2.1e-42 176.8 118 69.5
CAN.G8.40 Capsicum annuum HOM05D007440 ORTHO05D009418 2.8e-34 149.8 107 60.7
Thecc.09G136000 Theobroma cacao HOM05D007440 ORTHO05D009418 5.2e-33 145.6 98 74.5
AagrBONN_evm.TU.Sc2ySwM_362.1381 Anthoceros agrestis HOM05D007440 ORTHO05D009418 9.2e-30 134.8 119 49.6
Lsat_1_v5_gn_7_9441 Lactuca sativa HOM05D007440 ORTHO05D009418 7.8e-29 131.7 108 59.3
PRCOL_00006364 Prasinoderma coloniale HOM05D007440 ORTHO05D009418 1.0e-28 131.3 241 34.4
Thecc.02G308000 Theobroma cacao HOM05D007440 ORTHO05D009418 1.2e-24 117.9 77 76.6
CAN.G8.41 Capsicum annuum HOM05D007440 ORTHO05D009418 9.2e-22 108.2 74 66.2
Nitab4.5_0000219g0060 Nicotiana tabacum HOM05D007440 ORTHO05D009418 3.0e-20 103.2 67 70.1
ECA247G2990 Erigeron canadensis HOM05D007440 ORTHO05D009418 1.1e-17 94.7 107 49.5
Cre10.g451000 Chlamydomonas reinhardtii HOM05D007440 ORTHO05D009418 6.8e-17 92.0 285 26.0
PSO170G4713 Papaver somniferum HOM05D006997 ORTHO05D008713 2.6e-16 90.1 254 26.8
PSO447G0258 Papaver somniferum HOM05D006997 ORTHO05D008713 1.7e-15 87.4 254 26.8
PSO700G0253 Papaver somniferum HOM05D006997 ORTHO05D008713 2.2e-15 87.0 263 26.6
Mapoly0028s0040 Marchantia polymorpha HOM05D006997 ORTHO05D008713 8.3e-15 85.1 243 25.5
TPR.G18644 Trifolium pratense HOM05D006997 ORTHO05D008713 7.1e-14 82.0 254 23.6
Cre12.g558400 Chlamydomonas reinhardtii HOM05D006997 ORTHO05D008713 2.3e-12 77.0 259 26.6
arahy.Tifrunner.gnm1.ann1.2V06JV Arachis hypogaea HOM05D006997 ORTHO05D008713 1.1e-11 74.7 243 23.9
SMO203G0247 Selaginella moellendorffii HOM05D006997 ORTHO05D008713 1.1e-11 74.7 182 26.4


User provided reference genes

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