Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G5303 Papaver somniferum HOM05D002915 ORTHO05D003004 2.1e-103 379.0 191 100.0
PSO339G6727 Papaver somniferum HOM05D002915 ORTHO05D003004 2.7e-66 255.8 198 68.7
PSO384G2811 Papaver somniferum HOM05D002915 ORTHO05D003004 1.8e-65 253.1 199 69.3
PSO384G3355 Papaver somniferum HOM05D002915 ORTHO05D003004 1.8e-65 253.1 199 69.3
PSO832G1590 Papaver somniferum HOM05D002915 ORTHO05D003004 2.9e-28 129.4 183 41.0
Cfa002665 Carpinus fangiana HOM05D002915 ORTHO05D003004 1.4e-17 94.0 117 43.6
Haze_24934 Corylus avellana HOM05D002915 ORTHO05D003004 1.5e-16 90.5 114 43.0
TAR629G0058 Trochodendron aralioides HOM05D002915 ORTHO05D003004 3.7e-15 85.9 153 34.0
Potri.013G008800 Populus trichocarpa HOM05D002915 ORTHO05D003004 4.8e-15 85.5 94 43.6
TAR629G0865 Trochodendron aralioides HOM05D002915 ORTHO05D003004 6.3e-15 85.1 166 32.5
PSO832G1209 Papaver somniferum HOM05D002915 ORTHO05D003004 1.1e-14 84.3 140 36.4
Lj6A821T72 Lonicera japonica HOM05D002915 ORTHO05D003004 1.8e-14 83.6 166 29.5
Manes.12G014800 Manihot esculenta HOM05D002915 ORTHO05D003004 1.8e-14 83.6 161 34.2
CiPaw.06G099700 Carya illinoinensis HOM05D002915 ORTHO05D003004 2.4e-14 83.2 83 48.2
Manes.13G015600 Manihot esculenta HOM05D002915 ORTHO05D003004 2.4e-14 83.2 100 38.0
Migut.F00476 Erythranthe guttata HOM05D002915 ORTHO05D003004 3.1e-14 82.8 113 38.9
Sabra13G0007400 Salix brachista HOM05D002915 ORTHO05D003004 7.0e-14 81.6 198 29.3
Atru.chr1.711 Acer truncatum HOM05D002915 ORTHO05D003004 9.1e-14 81.3 177 28.8
Cc00_g21400 Coffea canephora HOM05D002915 ORTHO05D003004 9.1e-14 81.3 87 46.0
Migut.C00063 Erythranthe guttata HOM05D002915 ORTHO05D003004 9.1e-14 81.3 115 39.1
Manes.12G023850 Manihot esculenta HOM05D002915 ORTHO05D003004 1.2e-13 80.9 161 34.2
Migut.H01084 Erythranthe guttata HOM05D002915 ORTHO05D003004 1.6e-13 80.5 112 38.4
Haze_14809 Corylus avellana HOM05D002915 ORTHO05D003004 2.0e-13 80.1 109 40.4
Migut.C00066 Erythranthe guttata HOM05D002915 ORTHO05D003004 2.0e-13 80.1 182 30.2
Atru.chr11.2288 Acer truncatum HOM05D002915 ORTHO05D003004 2.7e-13 79.7 82 43.9
TAR374G0847 Trochodendron aralioides HOM05D002915 ORTHO05D003004 3.5e-13 79.3 83 48.2
Cc08_g03020 Coffea canephora HOM05D002915 ORTHO05D003004 4.5e-13 79.0 100 41.0
MD16G1169500 Malus domestica HOM05D002915 ORTHO05D003004 4.5e-13 79.0 137 32.1
Manes.11G084185 Manihot esculenta HOM05D002915 ORTHO05D003004 4.5e-13 79.0 122 36.1
Atru.chr11.2244 Acer truncatum HOM05D002915 ORTHO05D003004 5.9e-13 78.6 95 40.0
Atru.chr11.2259 Acer truncatum HOM05D002915 ORTHO05D003004 5.9e-13 78.6 95 40.0
Lalb_Chr18g0050831 Lupinus albus HOM05D002915 ORTHO05D003004 5.9e-13 78.6 111 38.7
Atru.chr1.712 Acer truncatum HOM05D002915 ORTHO05D003004 7.7e-13 78.2 177 28.2
Actinidia25760 Actinidia chinensis HOM05D002915 ORTHO05D003004 7.7e-13 78.2 199 29.1
Cc11_g03110 Coffea canephora HOM05D002915 ORTHO05D003004 7.7e-13 78.2 119 38.7
Thecc.09G039200 Theobroma cacao HOM05D002915 ORTHO05D003004 7.7e-13 78.2 90 43.3
Gohir.A11G040100 Gossypium hirsutum HOM05D002915 ORTHO05D003004 1.0e-12 77.8 95 43.2
Thecc.03G155900 Theobroma cacao HOM05D002915 ORTHO05D003004 1.3e-12 77.4 82 43.9
Dinv14798 Davidia involucrata HOM05D002915 ORTHO05D003004 1.7e-12 77.0 149 32.9
Hma1.2p1_0167F.1_g073810 Hydrangea macrophylla HOM05D002915 ORTHO05D003004 1.7e-12 77.0 85 40.0
Potri.001G321400 Populus trichocarpa HOM05D002915 ORTHO05D003004 1.7e-12 77.0 178 30.3
Prupe.1G137300 Prunus persica HOM05D002915 ORTHO05D003004 1.7e-12 77.0 122 35.2
Cc00_g09710 Coffea canephora HOM05D002915 ORTHO05D003004 2.9e-12 76.3 111 36.0
Cc03_g08730 Coffea canephora HOM05D002915 ORTHO05D003004 3.8e-12 75.9 87 43.7
Lj4g0001673 Lotus japonicus HOM05D002915 ORTHO05D003004 3.8e-12 75.9 91 40.7
Lsat_1_v5_gn_8_150181 Lactuca sativa HOM05D000825 ORTHO05D003684 5.0e-12 75.5 89 39.3
Aqoxy1G01229 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 6.5e-12 75.1 83 39.8
Lj1g0003622 Lotus japonicus HOM05D002915 ORTHO05D003004 6.5e-12 75.1 92 40.2
MD16G1170100 Malus domestica HOM05D002915 ORTHO05D003004 6.5e-12 75.1 119 35.3
TPR.G23884 Trifolium pratense HOM05D002915 ORTHO05D003004 6.5e-12 75.1 96 37.5
TAR629G2135 Trochodendron aralioides HOM05D002915 ORTHO05D003004 6.5e-12 75.1 119 37.8
CSS0045033 Camellia sinensis var. sinensis HOM05D002915 ORTHO05D003004 1.1e-11 74.3 83 45.8
HanXRQChr08g0207481 Helianthus annuus HOM05D002915 ORTHO05D003004 1.1e-11 74.3 95 36.8
Phvul.002G142400 Phaseolus vulgaris HOM05D002915 ORTHO05D003004 1.5e-11 73.9 91 35.2
Aqoxy4G02244 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 1.9e-11 73.6 81 40.7
CiPaw.05G115500 Carya illinoinensis HOM05D002915 ORTHO05D003004 1.9e-11 73.6 83 43.4
Lj5g0016376 Lotus japonicus HOM05D002915 ORTHO05D003004 1.9e-11 73.6 93 37.6
Lalb_Chr13g0303601 Lupinus albus HOM05D002915 ORTHO05D003004 1.9e-11 73.6 86 40.7
FAN19G1392 Fragaria x ananassa HOM05D002915 ORTHO05D003004 2.5e-11 73.2 106 34.0
Gorai.007G046700 Gossypium raimondii HOM05D002915 ORTHO05D003004 2.5e-11 73.2 95 41.1
Lj4g0025234 Lotus japonicus HOM05D002915 ORTHO05D003004 2.5e-11 73.2 93 36.6
Oeu033490.1 Olea europaea HOM05D002915 ORTHO05D003004 2.5e-11 73.2 83 41.0
CiPaw.05G115300 Carya illinoinensis HOM05D002915 ORTHO05D003004 4.2e-11 72.4 83 43.4
CiPaw.05G115400 Carya illinoinensis HOM05D002915 ORTHO05D003004 4.2e-11 72.4 83 43.4
Lalb_Chr10g0105601 Lupinus albus HOM05D002915 ORTHO05D003004 4.2e-11 72.4 72 44.4
RcHm_v2.0_Chr4g0422141 Rosa chinensis HOM05D002915 ORTHO05D003004 4.2e-11 72.4 143 29.4
Glyma.07G247800 Glycine max HOM05D002915 ORTHO05D003004 5.5e-11 72.0 96 39.6
FAN26G0404 Fragaria x ananassa HOM05D002915 ORTHO05D003004 7.2e-11 71.6 104 33.7
Rhsim12G0105400 Rhododendron simsii HOM05D002915 ORTHO05D003004 7.2e-11 71.6 179 28.5
ECA233G1149 Erigeron canadensis HOM05D000825 ORTHO05D003004 9.4e-11 71.2 89 37.1
QL03p054762 Quercus lobata HOM05D002915 ORTHO05D003004 1.2e-10 70.9 178 31.5
TWI09G1418 Tripterygium wilfordii HOM05D002915 ORTHO05D003004 1.2e-10 70.9 86 36.0
vmacro16134 Vaccinium macrocarpon HOM05D002915 ORTHO05D003004 1.2e-10 70.9 83 44.6
Lj4g0014849 Lotus japonicus HOM05D002915 ORTHO05D003004 2.1e-10 70.1 93 35.5
PGSC0003DMG400021580 Solanum tuberosum HOM05D002915 ORTHO05D003004 2.1e-10 70.1 90 38.9
Aqoxy7G00055 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 2.7e-10 69.7 82 37.8
Lj6A815T43 Lonicera japonica HOM05D002915 ORTHO05D003004 2.7e-10 69.7 82 37.8
Lj2g0014982 Lotus japonicus HOM05D002915 ORTHO05D003004 2.7e-10 69.7 91 36.3
DCAR_018111 Daucus carota HOM05D002915 ORTHO05D003004 4.7e-10 68.9 112 31.2
Lj5g0000576 Lotus japonicus HOM05D002915 ORTHO05D003004 4.7e-10 68.9 92 34.8
Medtr5g033770 Medicago truncatula HOM05D002915 ORTHO05D003004 4.7e-10 68.9 95 32.6
Rhsim12G0105300 Rhododendron simsii HOM05D002915 ORTHO05D003004 4.7e-10 68.9 85 41.2
MELO3C029741.2 Cucumis melo HOM05D002915 ORTHO05D003004 6.1e-10 68.6 106 36.8
CsaV3_1G004340 Cucumis sativus L. HOM05D002915 ORTHO05D003004 6.1e-10 68.6 82 41.5
Gohir.D11G043350 Gossypium hirsutum HOM05D002915 ORTHO05D003004 6.1e-10 68.6 95 42.1
PGR142G3351 Punica granatum HOM05D002915 ORTHO05D003004 6.1e-10 68.6 100 37.0
Ciclev10006753m.g Citrus clementina HOM05D002915 ORTHO05D003004 8.0e-10 68.2 76 42.1
Ciclev10033456m.g Citrus clementina HOM05D002915 ORTHO05D003004 8.0e-10 68.2 83 38.6
CAN.G853.27 Capsicum annuum HOM05D002915 ORTHO05D003004 1.4e-09 67.4 89 34.8
Thecc.06G218700 Theobroma cacao HOM05D002915 ORTHO05D003004 1.4e-09 67.4 128 32.8
Lj1g0028201 Lotus japonicus HOM05D002915 ORTHO05D003004 1.8e-09 67.0 90 35.6
Lj3g0023229 Lotus japonicus HOM05D002915 ORTHO05D003004 1.8e-09 67.0 92 35.9
Lj5g0020165 Lotus japonicus HOM05D002915 ORTHO05D003004 2.3e-09 66.6 92 34.8
Psat4g025920 Pisum sativum HOM05D002915 ORTHO05D003004 2.3e-09 66.6 95 35.8
FAN07G0523 Fragaria x ananassa HOM05D002915 ORTHO05D003004 3.0e-09 66.2 104 34.6
Rhsim02G0221300 Rhododendron simsii HOM05D002915 ORTHO05D003004 3.0e-09 66.2 85 40.0
FAN17G1773 Fragaria x ananassa HOM05D002915 ORTHO05D003004 4.0e-09 65.9 104 34.6
Rhsim13G0213700 Rhododendron simsii HOM05D002915 ORTHO05D003004 4.0e-09 65.9 85 40.0
TPR.G3196 Trifolium pratense HOM05D002915 ORTHO05D003004 4.0e-09 65.9 106 31.1
ClCG11G013100 Citrullus lanatus HOM05D002915 ORTHO05D003004 6.8e-09 65.1 90 36.7
Psat0s1573g0120 Pisum sativum HOM05D002915 ORTHO05D003004 6.8e-09 65.1 98 31.6
Cpa.g.sc3.322 Carica papaya HOM05D002915 ORTHO05D003004 8.8e-09 64.7 88 39.8
DCAR_018110 Daucus carota HOM05D002915 ORTHO05D003004 8.8e-09 64.7 97 36.1
Duzib150G0710 Durio zibethinus HOM05D002915 ORTHO05D003004 8.8e-09 64.7 166 28.9
Hund03449 Selenicereus undatus HOM05D002915 ORTHO05D003004 8.8e-09 64.7 81 34.6
Medtr4g119850 Medicago truncatula HOM05D002915 ORTHO05D003004 1.2e-08 64.3 95 31.6
Glyma.17G026300 Glycine max HOM05D002915 ORTHO05D003004 1.5e-08 63.9 97 37.1
SGA_v2.0_scaffold51G18778 Striga asiatica HOM05D002915 ORTHO05D003004 1.5e-08 63.9 84 35.7
Aqoxy1G00479 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 2.0e-08 63.5 81 34.6
CAN.G1143.27 Capsicum annuum HOM05D002915 ORTHO05D003004 3.4e-08 62.8 99 31.3
Cc02_g04260 Coffea canephora HOM05D002915 ORTHO05D003004 3.4e-08 62.8 90 33.3
FAN12G2317 Fragaria x ananassa HOM05D002915 ORTHO05D003004 4.4e-08 62.4 94 36.2
Lj4g0008862 Lotus japonicus HOM05D002915 ORTHO05D003004 4.4e-08 62.4 91 35.2
Gohir.A05G169100 Gossypium hirsutum HOM05D002915 ORTHO05D003004 7.5e-08 61.6 161 29.8
MELO3C011803.2 Cucumis melo HOM05D002915 ORTHO05D003004 9.8e-08 61.2 84 40.5
Duzib168G1329 Durio zibethinus HOM05D002915 ORTHO05D003004 9.8e-08 61.2 125 31.2
FAN23G0131 Fragaria x ananassa HOM05D002915 ORTHO05D003004 9.8e-08 61.2 69 43.5
Cc05_g03590 Coffea canephora HOM05D002915 ORTHO05D003004 2.8e-07 59.7 90 38.9
MELO3C034049.2 Cucumis melo HOM05D002915 ORTHO05D003004 2.8e-07 59.7 84 39.3
Lj2g0026934 Lotus japonicus HOM05D002915 ORTHO05D003004 2.8e-07 59.7 76 36.8
Phvul.003G180500 Phaseolus vulgaris HOM05D002915 ORTHO05D003004 3.7e-07 59.3 76 32.9
Lj4g0002182 Lotus japonicus HOM05D002915 ORTHO05D003004 4.8e-07 58.9 102 30.4
Phvul.L006943 Phaseolus vulgaris HOM05D002915 ORTHO05D003004 4.8e-07 58.9 94 31.9
THA.LOC104810144 Tarenaya hassleriana HOM05D002915 ORTHO05D003004 4.8e-07 58.9 155 30.3
CsaV3_5G029620 Cucumis sativus L. HOM05D002915 ORTHO05D003004 6.3e-07 58.5 84 38.1
Eucgr.H01273 Eucalyptus grandis HOM05D002915 ORTHO05D003004 6.3e-07 58.5 79 34.2
Lj6g0013707 Lotus japonicus HOM05D002915 ORTHO05D003004 6.3e-07 58.5 76 36.8
Lj6g0019512 Lotus japonicus HOM05D002915 ORTHO05D003004 6.3e-07 58.5 76 35.5
Medtr3g075360 Medicago truncatula HOM05D002915 ORTHO05D003004 6.3e-07 58.5 84 33.3
Sed0005801 Sechium edule HOM05D002915 ORTHO05D003004 6.3e-07 58.5 88 30.7
DCAR_016182 Daucus carota HOM05D002915 ORTHO05D003004 8.3e-07 58.2 115 31.3
Ca_21504_v3 Cicer arietinum L. HOM05D002915 ORTHO05D003004 1.4e-06 57.4 91 35.2
Lj3g0026757 Lotus japonicus HOM05D002915 ORTHO05D003004 1.4e-06 57.4 71 40.8
Sp5g30010 Schrenkiella parvula HOM05D002915 ORTHO05D003004 1.4e-06 57.4 95 31.6
PGSC0003DMG400037269 Solanum tuberosum HOM05D002915 ORTHO05D003004 1.4e-06 57.4 90 32.2
TPR.G19430 Trifolium pratense HOM05D002915 ORTHO05D003004 1.4e-06 57.4 93 34.4
Dinv28571 Davidia involucrata HOM05D002915 ORTHO05D003004 1.8e-06 57.0 139 30.2
Gohir.D05G172300 Gossypium hirsutum HOM05D002915 ORTHO05D003004 3.1e-06 56.2 159 28.3
TPR.G19429 Trifolium pratense HOM05D002915 ORTHO05D003004 3.1e-06 56.2 92 32.6
Duzib168G1942 Durio zibethinus HOM05D002915 ORTHO05D003004 5.4e-06 55.5 88 38.6
ECA234G1395 Erigeron canadensis HOM05D004805 ORTHO05D005756 5.4e-06 55.5 86 34.9
Gorai.009G177500 Gossypium raimondii HOM05D002915 ORTHO05D003004 5.4e-06 55.5 159 28.3


User provided reference genes

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