Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G5280 Papaver somniferum HOM05D006380 ORTHO05D008400 3.9e-48 194.5 100 100.0
PSO782G2024 Papaver somniferum HOM05D006380 ORTHO05D008400 2.2e-35 152.1 80 97.5
PSO782G2056 Papaver somniferum HOM05D006380 ORTHO05D008400 2.2e-35 152.1 80 97.5
PSO782G3094 Papaver somniferum HOM05D006380 ORTHO05D008400 2.2e-35 152.1 80 97.5
PSO782G3183 Papaver somniferum HOM05D006380 ORTHO05D008400 2.2e-35 152.1 80 97.5
PSO782G4930 Papaver somniferum HOM05D006380 ORTHO05D008400 2.2e-35 152.1 80 97.5
PSO478G2487 Papaver somniferum HOM05D006380 ORTHO05D008400 9.2e-34 146.7 80 93.8
Nn5g30673 Nelumbo nucifera HOM05D006380 ORTHO05D008400 4.4e-28 127.9 80 81.2
CiPaw.05G020800 Carya illinoinensis HOM05D006380 ORTHO05D008400 9.9e-28 126.7 80 82.5
Ah.01g007080 Amaranthus hybridus HOM05D006380 ORTHO05D008400 1.3e-27 126.3 80 77.5
EL10Ac9g22178 Beta vulgaris HOM05D006380 ORTHO05D008400 1.7e-27 125.9 80 77.5
Cfa004699 Carpinus fangiana HOM05D006380 ORTHO05D008400 1.7e-27 125.9 80 82.5
Haze_10300 Corylus avellana HOM05D006380 ORTHO05D008400 1.7e-27 125.9 80 82.5
Hund00420 Selenicereus undatus HOM05D006380 ORTHO05D008400 1.7e-27 125.9 80 76.2
CARHR018470 Cardamine hirsuta HOM05D006380 ORTHO05D008400 2.2e-27 125.6 80 77.5
TAR628G0543 Trochodendron aralioides HOM05D006380 ORTHO05D008400 2.2e-27 125.6 80 80.0
THA.LOC104812194 Tarenaya hassleriana HOM05D006380 ORTHO05D008400 2.9e-27 125.2 80 77.5
AT1G17870 Arabidopsis thaliana HOM05D006380 ORTHO05D008400 3.8e-27 124.8 80 76.2
AUR62027024 Chenopodium quinoa HOM05D006380 ORTHO05D008400 3.8e-27 124.8 80 77.5
AUR62030866 Chenopodium quinoa HOM05D006380 ORTHO05D008400 3.8e-27 124.8 80 77.5
Cc02_g20060 Coffea canephora HOM05D006380 ORTHO05D008400 3.8e-27 124.8 80 78.8
Thhalv10007206m.g Eutrema salsugineum HOM05D006380 ORTHO05D008400 3.8e-27 124.8 80 76.2
Sp1g15960 Schrenkiella parvula HOM05D006380 ORTHO05D008400 4.9e-27 124.4 80 78.8
Atru.chr5.2291 Acer truncatum HOM05D006380 ORTHO05D008400 8.4e-27 123.6 80 76.2
AL1G30230 Arabidopsis lyrata HOM05D006380 ORTHO05D008400 8.4e-27 123.6 80 76.2
Duzib132G0363 Durio zibethinus HOM05D006380 ORTHO05D008400 1.1e-26 123.2 80 78.8
QL09p050079 Quercus lobata HOM05D006380 ORTHO05D008400 1.1e-26 123.2 80 76.2
A06p13930 Brassica napus HOM05D006380 ORTHO05D008400 2.4e-26 122.1 80 76.2
BraA06t24534Z Brassica rapa HOM05D006380 ORTHO05D008400 2.4e-26 122.1 80 76.2
BcaB07g34011 Brassica carinata HOM05D006380 ORTHO05D008400 3.2e-26 121.7 80 76.2
C05p16250 Brassica napus HOM05D006380 ORTHO05D008400 3.2e-26 121.7 80 76.2
BolC5t30327H Brassica oleracea HOM05D006380 ORTHO05D008400 3.2e-26 121.7 80 76.2
Carub.0001s1760 Capsella rubella HOM05D006380 ORTHO05D008400 3.2e-26 121.7 80 75.0
Medtr4g010130 Medicago truncatula HOM05D006380 ORTHO05D008400 3.2e-26 121.7 80 76.2
Potri.001G289700 Populus trichocarpa HOM05D006380 ORTHO05D008400 3.2e-26 121.7 80 78.8
GSVIVG01037052001 Vitis vinifera HOM05D006380 ORTHO05D008400 4.2e-26 121.3 80 78.8
Aa31LG7G2670 Aethionema arabicum HOM05D006380 ORTHO05D008400 5.4e-26 120.9 80 75.0
SGA_v2.0_scaffold225G43062 Striga asiatica HOM05D006380 ORTHO05D008400 5.4e-26 120.9 80 78.8
Gohir.A01G009420 Gossypium hirsutum HOM05D006380 ORTHO05D008400 7.1e-26 120.6 80 76.2
Gohir.D01G009000 Gossypium hirsutum HOM05D006380 ORTHO05D008400 7.1e-26 120.6 80 76.2
MELO3C018023.2 Cucumis melo HOM05D006380 ORTHO05D008400 9.3e-26 120.2 80 76.2
Oeu037293.1 Olea europaea HOM05D006380 ORTHO05D008400 9.3e-26 120.2 80 77.5
SalBow6G3392 Salvia bowleyana HOM05D006380 ORTHO05D008400 9.3e-26 120.2 80 76.2
FvH4_2g03320 Fragaria vesca HOM05D006380 ORTHO05D008400 1.2e-25 119.8 80 77.5
FAN20G2135 Fragaria x ananassa HOM05D006380 ORTHO05D008400 1.2e-25 119.8 80 77.5
CANSAT25G1826 Cannabis sativa HOM05D006380 ORTHO05D008400 1.6e-25 119.4 80 77.5
CAN.G606.71 Capsicum annuum HOM05D006380 ORTHO05D008400 1.6e-25 119.4 80 76.2
FAN24G2317 Fragaria x ananassa HOM05D006380 ORTHO05D008400 1.6e-25 119.4 80 76.2
Phvul.002G050700 Phaseolus vulgaris HOM05D006380 ORTHO05D008400 2.1e-25 119.0 80 72.5
Psat7g257160 Pisum sativum HOM05D006380 ORTHO05D008400 2.1e-25 119.0 80 75.0
TWI59G1228 Tripterygium wilfordii HOM05D006380 ORTHO05D008400 2.1e-25 119.0 80 76.2
Dinv09537 Davidia involucrata HOM05D006380 ORTHO05D008400 3.5e-25 118.2 80 75.0
Gorai.002G011000 Gossypium raimondii HOM05D006380 ORTHO05D008400 3.5e-25 118.2 80 75.0
Lsat_1_v5_gn_9_113340 Lactuca sativa HOM05D006380 ORTHO05D008400 3.5e-25 118.2 80 72.5
ECA240G4721 Erigeron canadensis HOM05D006380 ORTHO05D008400 4.6e-25 117.9 80 75.0
FAN15G1102 Fragaria x ananassa HOM05D006380 ORTHO05D008400 4.6e-25 117.9 80 76.2
Manes.10G087000 Manihot esculenta HOM05D006380 ORTHO05D008400 4.6e-25 117.9 80 76.2
Thecc.02G120100 Theobroma cacao HOM05D006380 ORTHO05D008400 4.6e-25 117.9 80 75.0
VMungo1215G0608 Vigna mungo HOM05D006380 ORTHO05D008400 4.6e-25 117.9 80 72.5
MSTRG.16672 Avicennia marina HOM05D006380 ORTHO05D008400 6.0e-25 117.5 80 75.0
Sc08g0004330 Simmondsia chinensis HOM05D006380 ORTHO05D008400 6.0e-25 117.5 80 76.2
Eucgr.G01188 Eucalyptus grandis HOM05D006380 ORTHO05D008400 7.8e-25 117.1 80 75.0
RhsimUnG0040900 Rhododendron simsii HOM05D006380 ORTHO05D008400 7.8e-25 117.1 80 71.2
RhsimUnG0122900 Rhododendron simsii HOM05D006380 ORTHO05D008400 7.8e-25 117.1 80 71.2
Sabra16G0181300 Salix brachista HOM05D006380 ORTHO05D008400 7.8e-25 117.1 80 76.2
Nitab4.5_0001099g0050 Nicotiana tabacum HOM05D006380 ORTHO05D008400 1.0e-24 116.7 80 75.0
Nitab4.5_0010145g0010 Nicotiana tabacum HOM05D006380 ORTHO05D008400 1.0e-24 116.7 80 75.0
RcHm_v2.0_Chr6g0248441 Rosa chinensis HOM05D006380 ORTHO05D008400 1.0e-24 116.7 80 75.0
Aqoxy5G00814 Aquilegia oxysepala HOM05D006380 ORTHO05D008400 1.3e-24 116.3 80 77.5
COL.COLO4_32484 Corchorus olitorius HOM05D006380 ORTHO05D008400 1.3e-24 116.3 80 73.8
Prupe.8G150400 Prunus persica HOM05D006380 ORTHO05D008400 1.3e-24 116.3 80 75.0
CSS0017857 Camellia sinensis var. sinensis HOM05D006380 ORTHO05D008400 1.7e-24 115.9 80 73.8
CSS0030074 Camellia sinensis var. sinensis HOM05D006380 ORTHO05D008400 1.7e-24 115.9 80 73.8
Solyc01g106820.3 Solanum lycopersicum HOM05D006380 ORTHO05D008400 1.7e-24 115.9 80 75.0
PGSC0003DMG400025737 Solanum tuberosum HOM05D006380 ORTHO05D008400 1.7e-24 115.9 80 75.0
ClCG10G010040 Citrullus lanatus HOM05D006380 ORTHO05D008400 2.3e-24 115.5 80 75.0
CsaV3_4G000080 Cucumis sativus L. HOM05D006380 ORTHO05D008400 2.3e-24 115.5 80 72.5
TPR.G38635 Trifolium pratense HOM05D006380 ORTHO05D008400 3.0e-24 115.2 80 71.2
vmacro01945 Vaccinium macrocarpon HOM05D006380 ORTHO05D008400 3.0e-24 115.2 80 70.0
Ca_20446_v3 Cicer arietinum L. HOM05D006380 ORTHO05D008400 3.9e-24 114.8 80 71.2
HanXRQChr09g0250961 Helianthus annuus HOM05D006380 ORTHO05D008400 5.1e-24 114.4 80 70.0
Lj3g0024697 Lotus japonicus HOM05D006380 ORTHO05D008400 5.1e-24 114.4 80 70.0
MBI16_g31132_MAGBIO Magnolia biondii HOM05D006380 ORTHO05D008400 5.1e-24 114.4 79 74.7
Ciclev10028052m.g Citrus clementina HOM05D006380 ORTHO05D008400 1.1e-23 113.2 80 72.5
MD10G1110200 Malus domestica HOM05D006380 ORTHO05D008400 1.5e-23 112.8 80 72.5
Glyma.01G241500 Glycine max HOM05D006380 ORTHO05D008400 3.3e-23 111.7 80 67.5
Migut.B00463 Erythranthe guttata HOM05D006380 ORTHO05D008400 4.3e-23 111.3 80 67.5
PGR042G2482 Punica granatum HOM05D006380 ORTHO05D008400 7.3e-23 110.5 80 73.8
Sed0021356 Sechium edule HOM05D006380 ORTHO05D008400 1.3e-22 109.8 80 71.2
HPP92_020044 Vanilla planifolia HOM05D006380 ORTHO05D008400 1.3e-22 109.8 79 69.6
Actinidia02441 Actinidia chinensis HOM05D006380 ORTHO05D008400 1.6e-22 109.4 80 70.0
arahy.Tifrunner.gnm1.ann1.3DIB68 Arachis hypogaea HOM05D006380 ORTHO05D008400 1.1e-21 106.7 81 66.7
arahy.Tifrunner.gnm1.ann1.XY5X2R Arachis hypogaea HOM05D006380 ORTHO05D008400 1.1e-21 106.7 81 66.7
Zm00001eb056010 Zea mays HOM05D006380 ORTHO05D008400 4.0e-21 104.8 79 68.4
SEGI_29752 Sequoiadendron giganteum HOM05D006380 ORTHO05D008400 2.9e-19 98.6 79 65.8
SMO239G0018 Selaginella moellendorffii HOM05D006380 ORTHO05D008400 3.8e-19 98.2 80 62.5
DCAR_021944 Daucus carota HOM05D006380 ORTHO05D008400 1.4e-18 96.3 72 72.2
AagrBONN_evm.TU.Sc2ySwM_228.3314 Anthoceros agrestis HOM05D006380 ORTHO05D008400 2.1e-17 92.4 86 53.5
Lj9C337G13 Lonicera japonica HOM05D006380 ORTHO05D008400 3.5e-17 91.7 68 70.6
Pp3c20_2440 Physcomitrium patens HOM05D006380 ORTHO05D008400 1.3e-16 89.7 85 54.1
Os03g0729000 Oryza sativa ssp. japonica HOM05D006380 ORTHO05D008400 3.0e-16 88.6 79 63.3
Mapoly0031s0097 Marchantia polymorpha HOM05D006380 ORTHO05D008400 8.7e-16 87.0 78 53.8
Pp3c24_14160 Physcomitrium patens HOM05D006380 ORTHO05D008400 1.9e-15 85.9 85 51.8
Sopen01g049130 Solanum pennellii HOM05D006380 ORTHO05D008400 5.6e-15 84.3 64 67.2
Peaxi162Scf00016g03133 Petunia axillaris HOM05D006380 ORTHO05D008400 7.4e-15 84.0 80 61.2
ATR0739G100 Amborella trichopoda HOM05D006380 ORTHO05D008400 8.1e-14 80.5 68 63.2
Atru.chr5.2289 Acer truncatum HOM05D006380 ORTHO05D008400 3.0e-08 62.0 39 74.4


User provided reference genes

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