Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G5196 Papaver somniferum HOM05D006738 ORTHO05D008191 2.0e-58 229.2 139 100.0
PSO170G3684 Papaver somniferum HOM05D006738 ORTHO05D008191 1.1e-56 223.4 140 98.6
Dinv41794 Davidia involucrata HOM05D006738 ORTHO05D008191 3.7e-41 171.8 140 79.3
GSVIVG01025906001 Vitis vinifera HOM05D006738 ORTHO05D008191 4.1e-40 168.3 140 78.6
THA.LOC104815902 Tarenaya hassleriana HOM05D006738 ORTHO05D008191 5.4e-40 167.9 138 76.8
PGSC0003DMG400005175 Solanum tuberosum HOM05D006738 ORTHO05D008191 1.7e-38 162.9 138 64.5
Solyc06g064810.3 Solanum lycopersicum HOM05D006738 ORTHO05D008191 5.0e-38 161.4 138 63.8
Sopen06g023320 Solanum pennellii HOM05D006738 ORTHO05D008191 5.0e-38 161.4 138 63.8
Nitab4.5_0006564g0050 Nicotiana tabacum HOM05D006738 ORTHO05D008191 1.1e-37 160.2 138 63.8
Aqoxy6G00074 Aquilegia oxysepala HOM05D006738 ORTHO05D008191 1.5e-37 159.8 140 60.7
Sc20g0004710 Simmondsia chinensis HOM05D006738 ORTHO05D008191 4.3e-37 158.3 138 63.0
MD15G1400100 Malus domestica HOM05D006738 ORTHO05D008191 5.6e-37 157.9 138 73.2
Prupe.1G547300 Prunus persica HOM05D006738 ORTHO05D008191 5.6e-37 157.9 138 73.2
PGR042G2463 Punica granatum HOM05D006738 ORTHO05D008191 5.6e-37 157.9 138 72.5
CANSAT11G1518 Cannabis sativa HOM05D006738 ORTHO05D008191 1.6e-36 156.4 138 71.7
Potri.019G076400 Populus trichocarpa HOM05D006738 ORTHO05D008191 1.6e-36 156.4 139 74.8
Nn5g27492 Nelumbo nucifera HOM05D006738 ORTHO05D008191 2.1e-36 156.0 139 76.3
Cpa.g.sc21.54 Carica papaya HOM05D006738 ORTHO05D008191 2.8e-36 155.6 139 71.9
MD08G1215600 Malus domestica HOM05D006738 ORTHO05D008191 2.8e-36 155.6 138 72.5
QL09p004200 Quercus lobata HOM05D006738 ORTHO05D008191 3.6e-36 155.2 139 71.2
HPP92_002035 Vanilla planifolia HOM05D006738 ORTHO05D008191 3.6e-36 155.2 139 72.7
AUR62017706 Chenopodium quinoa HOM05D006738 ORTHO05D008191 4.7e-36 154.8 137 75.2
Atru.chr12.822 Acer truncatum HOM05D006738 ORTHO05D008191 6.2e-36 154.5 139 72.7
AUR62032974 Chenopodium quinoa HOM05D006738 ORTHO05D008191 6.2e-36 154.5 139 74.1
CSS0018644 Camellia sinensis var. sinensis HOM05D006738 ORTHO05D008191 1.1e-35 153.7 141 63.1
CSS0019392 Camellia sinensis var. sinensis HOM05D006738 ORTHO05D008191 1.1e-35 153.7 141 63.1
QL09p002987 Quercus lobata HOM05D006738 ORTHO05D008191 1.1e-35 153.7 139 59.7
QL09p004074 Quercus lobata HOM05D006738 ORTHO05D008191 1.1e-35 153.7 139 70.5
CiPaw.03G017200 Carya illinoinensis HOM05D006738 ORTHO05D008191 1.4e-35 153.3 138 71.7
COL.COLO4_24620 Corchorus olitorius HOM05D006738 ORTHO05D008191 2.3e-35 152.5 139 71.9
Sabra19G0086800 Salix brachista HOM05D006738 ORTHO05D008191 2.3e-35 152.5 139 72.7
Cc10_g09240 Coffea canephora HOM05D006738 ORTHO05D008191 3.1e-35 152.1 138 69.6
Gohir.A05G252100 Gossypium hirsutum HOM05D006738 ORTHO05D008191 3.1e-35 152.1 139 71.2
Medtr4g031650 Medicago truncatula HOM05D006738 ORTHO05D008191 3.1e-35 152.1 138 70.3
Migut.C01346 Erythranthe guttata HOM05D006738 ORTHO05D008191 4.0e-35 151.8 139 59.7
CiPaw.04G011300 Carya illinoinensis HOM05D006738 ORTHO05D008191 5.2e-35 151.4 138 71.0
Glyma.01G010600 Glycine max HOM05D006738 ORTHO05D008191 5.2e-35 151.4 139 71.2
Gohir.D05G253900 Gossypium hirsutum HOM05D006738 ORTHO05D008191 6.8e-35 151.0 139 70.5
TPR.G34128 Trifolium pratense HOM05D006738 ORTHO05D008191 6.8e-35 151.0 138 67.4
MELO3C022198.2 Cucumis melo HOM05D006738 ORTHO05D008191 8.9e-35 150.6 138 71.7
Manes.02G195900 Manihot esculenta HOM05D006738 ORTHO05D008191 1.5e-34 149.8 139 71.2
CsaV3_5G040220 Cucumis sativus L. HOM05D006738 ORTHO05D008191 2.0e-34 149.4 138 65.9
Thecc.08G171800 Theobroma cacao HOM05D006738 ORTHO05D008191 2.0e-34 149.4 139 71.9
BcaB07g33015 Brassica carinata HOM05D006738 ORTHO05D008191 3.4e-34 148.7 139 70.5
CDE05G2754 Ceratophyllum demersum HOM05D006738 ORTHO05D008191 3.4e-34 148.7 139 65.5
Duzib211G0443 Durio zibethinus HOM05D006738 ORTHO05D008191 3.4e-34 148.7 139 71.2
FvH4_5g25840 Fragaria vesca HOM05D006738 ORTHO05D008191 3.4e-34 148.7 140 57.9
FAN04G1736 Fragaria x ananassa HOM05D006738 ORTHO05D008191 3.4e-34 148.7 140 57.9
FAN18G1689 Fragaria x ananassa HOM05D006738 ORTHO05D008191 3.4e-34 148.7 140 57.9
Sed0003815 Sechium edule HOM05D006738 ORTHO05D008191 3.4e-34 148.7 139 68.3
SGA_v2.0_scaffold24G10619 Striga asiatica HOM05D006738 ORTHO05D008191 3.4e-34 148.7 137 70.1
Sp1g29140 Schrenkiella parvula HOM05D006738 ORTHO05D008191 4.4e-34 148.3 140 70.0
TWI14G1101 Tripterygium wilfordii HOM05D006738 ORTHO05D008191 4.4e-34 148.3 138 67.4
RcHm_v2.0_Chr7g0216321 Rosa chinensis HOM05D006738 ORTHO05D008191 7.5e-34 147.5 140 59.3
Aa31LG6G8130 Aethionema arabicum HOM05D000065 ORTHO05D000162 9.8e-34 147.1 136 69.1
ATR1089G071 Amborella trichopoda HOM05D006738 ORTHO05D008191 1.3e-33 146.7 140 72.9
Carub.0001s3198 Capsella rubella HOM05D006738 ORTHO05D008191 1.3e-33 146.7 139 72.7
Eucgr.F02960 Eucalyptus grandis HOM05D006738 ORTHO05D008191 1.3e-33 146.7 139 70.5
Oeu048220.2 Olea europaea HOM05D006738 ORTHO05D008191 1.3e-33 146.7 138 70.3
Thhalv10009075m.g Eutrema salsugineum HOM05D006738 ORTHO05D008191 1.7e-33 146.4 140 72.1
Lsat_1_v5_gn_5_78501 Lactuca sativa HOM05D006738 ORTHO05D008191 2.9e-33 145.6 137 58.4
BolC6t36356H Brassica oleracea HOM05D006738 ORTHO05D008191 3.7e-33 145.2 138 57.2
ECA234G1792 Erigeron canadensis HOM05D006738 ORTHO05D008191 3.7e-33 145.2 141 57.4
FAN08G0599 Fragaria x ananassa HOM05D006738 ORTHO05D008191 3.7e-33 145.2 140 57.1
A09p32610 Brassica napus HOM05D006738 ORTHO05D008191 4.9e-33 144.8 141 56.7
C06p12150 Brassica napus HOM05D006738 ORTHO05D008191 4.9e-33 144.8 138 57.2
BraA09t38801Z Brassica rapa HOM05D006738 ORTHO05D008191 4.9e-33 144.8 141 56.7
Lalb_Chr01g0000011 Lupinus albus HOM05D006738 ORTHO05D008191 4.9e-33 144.8 138 68.8
Phvul.002G133500 Phaseolus vulgaris HOM05D006738 ORTHO05D008191 6.4e-33 144.4 138 68.1
arahy.Tifrunner.gnm1.ann1.WI646Q Arachis hypogaea HOM05D006738 ORTHO05D008191 1.1e-32 143.7 140 58.6
AT1G33810 Arabidopsis thaliana HOM05D006738 ORTHO05D008191 1.4e-32 143.3 139 59.0
BcaC08g43833 Brassica carinata HOM05D006738 ORTHO05D008191 1.9e-32 142.9 138 56.5
CARHR033210 Cardamine hirsuta HOM05D006738 ORTHO05D008191 1.9e-32 142.9 139 70.5
AL1G48260 Arabidopsis lyrata HOM05D006738 ORTHO05D008191 3.2e-32 142.1 139 58.3
EL10Ac9g22957 Beta vulgaris HOM05D006738 ORTHO05D008191 3.2e-32 142.1 138 58.0
Ciclev10022763m.g Citrus clementina HOM05D006738 ORTHO05D008191 3.2e-32 142.1 140 67.9
VMungo1215G3331 Vigna mungo HOM05D006738 ORTHO05D008191 3.2e-32 142.1 138 58.0
DCAR_002119 Daucus carota HOM05D006738 ORTHO05D008191 7.1e-32 141.0 138 58.7
Psat0s2394g0120 Pisum sativum HOM05D006738 ORTHO05D008191 7.1e-32 141.0 138 66.7
arahy.Tifrunner.gnm1.ann1.67ZQRX Arachis hypogaea HOM05D006738 ORTHO05D008191 9.2e-32 140.6 140 57.9
Ah.01g012440 Amaranthus hybridus HOM05D006738 ORTHO05D008191 1.2e-31 140.2 136 58.1
unitig_748.g7730 Utricularia gibba HOM05D000331 ORTHO05D003399 1.2e-31 140.2 138 55.8
Lj3g0020973 Lotus japonicus HOM05D006738 ORTHO05D008191 4.6e-31 138.3 138 56.5
arahy.Tifrunner.gnm1.ann1.H480WY Arachis hypogaea HOM05D006738 ORTHO05D008191 1.0e-30 137.1 136 58.1
Haze_13918 Corylus avellana HOM05D006738 ORTHO05D008191 1.0e-30 137.1 141 55.3
Peaxi162Scf00269g01621 Petunia axillaris HOM05D006738 ORTHO05D008191 6.2e-28 127.9 138 53.6
Lj2A790G37 Lonicera japonica HOM05D006738 ORTHO05D008191 1.4e-27 126.7 115 65.2
MBI03_g14516_MAGBIO Magnolia biondii HOM05D006738 ORTHO05D008191 4.4e-26 121.7 102 81.4
Actinidia29399 Actinidia chinensis HOM05D006738 ORTHO05D008191 9.2e-24 114.0 114 71.9
Os08g0112600 Oryza sativa ssp. japonica HOM05D006738 ORTHO05D008191 1.6e-23 113.2 143 49.0
Gorai.009G265500 Gossypium raimondii HOM05D006738 ORTHO05D008191 4.6e-23 111.7 114 68.4
Rhsim07G0068100 Rhododendron simsii HOM05D006738 ORTHO05D008191 1.7e-22 109.8 157 44.6
QL09p000479 Quercus lobata HOM05D006738 ORTHO05D008191 2.3e-22 109.4 115 53.9
QL09p000618 Quercus lobata HOM05D006738 ORTHO05D008191 3.0e-22 109.0 92 64.1
Cfa008114 Carpinus fangiana HOM05D006738 ORTHO05D008191 2.4e-19 99.4 138 43.5
SEGI_33861 Sequoiadendron giganteum HOM05D006738 ORTHO05D008191 1.2e-18 97.1 119 61.3
QL09p000342 Quercus lobata HOM05D006738 ORTHO05D008191 7.6e-18 94.4 142 45.1
CiPaw.09G026000 Carya illinoinensis HOM05D006738 ORTHO05D008191 2.9e-17 92.4 143 42.0
Mapoly0047s0047 Marchantia polymorpha HOM05D006738 ORTHO05D008191 1.4e-16 90.1 115 45.2
SMO118G0306 Selaginella moellendorffii HOM05D006738 ORTHO05D008191 1.9e-16 89.7 139 37.4
vmacro13762 Vaccinium macrocarpon HOM05D006738 ORTHO05D008191 7.1e-16 87.8 133 45.1
Cc10_g16410 Coffea canephora HOM05D006738 ORTHO05D008191 1.6e-15 86.7 77 58.4
FAN13G2380 Fragaria x ananassa HOM05D006738 ORTHO05D008191 2.1e-15 86.3 138 41.3
Pp3c3_5650 Physcomitrium patens HOM05D006738 ORTHO05D008191 2.3e-14 82.8 131 38.2
Zm00001eb260580 Zea mays HOM05D006738 ORTHO05D008191 2.3e-14 82.8 98 52.0
AagrBONN_evm.TU.Sc2ySwM_228.5134 Anthoceros agrestis HOM05D006738 ORTHO05D008191 3.9e-14 82.0 131 35.9
Medtr4g031845 Medicago truncatula HOM05D006738 ORTHO05D008191 9.6e-13 77.4 71 59.2
Glyma.09G210500 Glycine max HOM05D006738 ORTHO05D008191 2.1e-12 76.3 75 54.7
ClCG08G000640 Citrullus lanatus HOM05D006738 ORTHO05D008191 2.8e-12 75.9 75 61.3
Zm00001eb236960 Zea mays HOM05D002538 ORTHO05D008191 5.3e-11 71.6 94 50.0
HanXRQChr10g0309751 Helianthus annuus HOM05D006738 ORTHO05D008191 9.0e-11 70.9 76 52.6
QL09p003020 Quercus lobata HOM05D006738 ORTHO05D008191 1.3e-09 67.0 71 52.1
Oeu017736.2 Olea europaea HOM05D006738 ORTHO05D008191 2.9e-09 65.9 87 43.7
SHI08988 Sapria himalayana HOM05D006738 ORTHO05D008191 4.9e-09 65.1 76 50.0
Hma1.2p1_0935F.1_g238670 Hydrangea macrophylla HOM05D006738 ORTHO05D008191 1.4e-08 63.5 49 69.4


User provided reference genes

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