Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G5178 Papaver somniferum HOM05D004727 ORTHO05D005788 1.1e-179 633.3 324 100.0
PSO478G4818 Papaver somniferum HOM05D004727 ORTHO05D005788 5.1e-174 614.4 324 92.0
Aqoxy7G00234 Aquilegia oxysepala HOM05D004727 ORTHO05D005788 5.0e-105 385.2 311 61.7
Psat0ss29864g0280 Pisum sativum HOM05D004727 ORTHO05D005788 4.2e-104 382.1 307 59.6
MD01G1208600 Malus domestica HOM05D004727 ORTHO05D005788 1.2e-103 380.6 321 59.5
HanXRQChr12g0381081 Helianthus annuus HOM05D004727 ORTHO05D005788 2.1e-103 379.8 295 63.1
Eucgr.A02736 Eucalyptus grandis HOM05D004727 ORTHO05D005788 3.6e-103 379.0 290 60.7
Ca_23692_v3 Cicer arietinum L. HOM05D004727 ORTHO05D005788 4.7e-103 378.6 319 59.2
Potri.004G073700 Populus trichocarpa HOM05D004727 ORTHO05D005788 6.1e-103 378.3 315 59.7
CSS0032352 Camellia sinensis var. sinensis HOM05D004727 ORTHO05D005788 1.0e-102 377.5 252 67.5
Lsat_1_v5_gn_9_56621 Lactuca sativa HOM05D004727 ORTHO05D005788 1.8e-102 376.7 314 60.8
GSVIVG01028857001 Vitis vinifera HOM05D004727 ORTHO05D005788 2.3e-102 376.3 249 68.3
Lalb_Chr03g0034881 Lupinus albus HOM05D004727 ORTHO05D005788 5.2e-102 375.2 321 57.0
Nn1g01641 Nelumbo nucifera HOM05D004727 ORTHO05D005788 5.2e-102 375.2 316 59.8
TPR.G33517 Trifolium pratense HOM05D004727 ORTHO05D005788 8.8e-102 374.4 318 58.2
Prupe.2G301200 Prunus persica HOM05D004727 ORTHO05D005788 2.0e-101 373.2 261 66.7
RcHm_v2.0_Chr1g0378381 Rosa chinensis HOM05D004727 ORTHO05D005788 5.7e-101 371.7 254 67.3
ECA232G4896 Erigeron canadensis HOM05D004727 ORTHO05D005788 9.8e-101 370.9 257 67.7
Cc02_g02360 Coffea canephora HOM05D004727 ORTHO05D005788 1.7e-100 370.2 316 57.0
Duzib205G1763 Durio zibethinus HOM05D004727 ORTHO05D005788 1.7e-100 370.2 251 64.9
vmacro09814 Vaccinium macrocarpon HOM05D004727 ORTHO05D005788 1.7e-100 370.2 269 63.6
Atru.chr1.354 Acer truncatum HOM05D004727 ORTHO05D005788 2.2e-100 369.8 246 66.3
Manes.06G152500 Manihot esculenta HOM05D004727 ORTHO05D005788 2.8e-100 369.4 248 66.1
FvH4_7g30250 Fragaria vesca HOM05D004727 ORTHO05D005788 8.3e-100 367.9 253 66.4
Potri.017G146200 Populus trichocarpa HOM05D004727 ORTHO05D005788 1.4e-99 367.1 253 66.0
FAN03G1377 Fragaria x ananassa HOM05D004727 ORTHO05D005788 1.8e-99 366.7 253 66.0
unitig_0.g2469 Utricularia gibba HOM05D004727 ORTHO05D005788 1.8e-99 366.7 251 65.7
FAN10G1092 Fragaria x ananassa HOM05D004727 ORTHO05D005788 3.1e-99 365.9 253 66.4
FAN10G3700 Fragaria x ananassa HOM05D004727 ORTHO05D005788 3.1e-99 365.9 253 66.4
Oeu061663.1 Olea europaea HOM05D004727 ORTHO05D005788 3.1e-99 365.9 251 66.1
MSTRG.8711 Avicennia marina HOM05D004727 ORTHO05D005788 7.0e-99 364.8 318 55.7
Gohir.D11G011600 Gossypium hirsutum HOM05D004727 ORTHO05D005788 9.1e-99 364.4 248 64.1
Gorai.007G013000 Gossypium raimondii HOM05D004727 ORTHO05D005788 9.1e-99 364.4 248 64.1
Phvul.004G107900 Phaseolus vulgaris HOM05D004727 ORTHO05D005788 9.1e-99 364.4 249 66.3
Sed0015096 Sechium edule HOM05D004727 ORTHO05D005788 9.1e-99 364.4 248 67.7
CAN.G126.29 Capsicum annuum HOM05D004727 ORTHO05D005788 1.2e-98 364.0 316 56.6
Cfa016290 Carpinus fangiana HOM05D002238 ORTHO05D007272 1.2e-98 364.0 317 55.8
Gohir.D08G109400 Gossypium hirsutum HOM05D004727 ORTHO05D005788 1.6e-98 363.6 248 64.9
Gohir.A08G085600 Gossypium hirsutum HOM05D004727 ORTHO05D005788 2.0e-98 363.2 248 64.5
Gorai.004G117100 Gossypium raimondii HOM05D004727 ORTHO05D005788 2.0e-98 363.2 248 64.9
VMungo0464G1912 Vigna mungo HOM05D004727 ORTHO05D005788 4.5e-98 362.1 249 65.5
Rhsim09G0200700 Rhododendron simsii HOM05D004727 ORTHO05D005788 5.9e-98 361.7 309 57.3
Glyma.09G131600 Glycine max HOM05D004727 ORTHO05D005788 1.0e-97 360.9 248 66.1
Lalb_Chr19g0130641 Lupinus albus HOM05D004727 ORTHO05D005788 1.0e-97 360.9 248 66.9
CsaV3_3G017470 Cucumis sativus L. HOM05D004727 ORTHO05D005788 1.7e-97 360.1 248 66.1
Aa31sc163G30 Aethionema arabicum HOM05D004727 ORTHO05D005788 2.3e-97 359.8 239 69.9
ATR0661G169 Amborella trichopoda HOM05D004727 ORTHO05D005788 2.3e-97 359.8 231 70.6
BolC1t02052H Brassica oleracea HOM05D004727 ORTHO05D005788 3.8e-97 359.0 256 64.8
Medtr0057s0080 Medicago truncatula HOM05D004727 ORTHO05D005788 3.8e-97 359.0 319 55.5
FAN06G4134 Fragaria x ananassa HOM05D004727 ORTHO05D005788 6.6e-97 358.2 267 62.9
Gohir.A11G012400 Gossypium hirsutum HOM05D004727 ORTHO05D005788 6.6e-97 358.2 320 54.7
Solyc03g007900.3 Solanum lycopersicum HOM05D004727 ORTHO05D005788 6.6e-97 358.2 317 55.2
COL.COLO4_30213 Corchorus olitorius HOM05D004727 ORTHO05D005788 8.6e-97 357.8 248 63.3
FAN06G0456 Fragaria x ananassa HOM05D004727 ORTHO05D005788 8.6e-97 357.8 267 62.5
CARHR233170 Cardamine hirsuta HOM05D004727 ORTHO05D005788 1.1e-96 357.5 248 66.9
A01p16970 Brassica napus HOM05D004727 ORTHO05D005788 1.9e-96 356.7 256 64.8
Nitab4.5_0008522g0010 Nicotiana tabacum HOM05D004727 ORTHO05D005788 2.5e-96 356.3 317 55.8
PGR042G1629 Punica granatum HOM05D004727 ORTHO05D005788 2.5e-96 356.3 248 66.9
Glyma.16G178900 Glycine max HOM05D004727 ORTHO05D005788 3.3e-96 355.9 248 64.5
Sopen03g003850 Solanum pennellii HOM05D004727 ORTHO05D005788 4.2e-96 355.5 317 54.9
C01p21250 Brassica napus HOM05D004727 ORTHO05D005788 5.5e-96 355.1 256 64.1
Thhalv10025771m.g Eutrema salsugineum HOM05D004727 ORTHO05D005788 5.5e-96 355.1 255 64.7
Peaxi162Scf00444g00244 Petunia axillaris HOM05D004727 ORTHO05D005788 1.2e-95 354.0 349 52.1
BraA01t01653Z Brassica rapa HOM05D004727 ORTHO05D005788 1.6e-95 353.6 256 64.1
Lj2g0018940 Lotus japonicus HOM05D004727 ORTHO05D005788 2.1e-95 353.2 319 55.2
unitig_52.g17730 Utricularia gibba HOM05D004727 ORTHO05D005788 3.6e-95 352.4 248 64.1
Sp7g23750 Schrenkiella parvula HOM05D004727 ORTHO05D005788 8.0e-95 351.3 246 65.4
Migut.F00289 Erythranthe guttata HOM05D004727 ORTHO05D005788 1.4e-94 350.5 252 62.7
Sabra04G0048400 Salix brachista HOM05D004727 ORTHO05D005788 1.4e-94 350.5 320 55.9
Medtr0057s0130 Medicago truncatula HOM05D004727 ORTHO05D005788 1.8e-94 350.1 252 65.9
Thecc.03G184500 Theobroma cacao HOM05D004727 ORTHO05D005788 1.8e-94 350.1 242 63.6
Carub.0007s1524 Capsella rubella HOM05D004727 ORTHO05D005788 2.3e-94 349.7 236 67.8
Actinidia03138 Actinidia chinensis HOM05D004727 ORTHO05D005788 3.0e-94 349.4 294 59.2
Glyma.09G131900 Glycine max HOM05D004727 ORTHO05D005788 3.0e-94 349.4 251 64.5
AL7G27320 Arabidopsis lyrata HOM05D004727 ORTHO05D005788 6.8e-94 348.2 234 67.9
Haze_00047 Corylus avellana HOM05D004727 ORTHO05D005788 1.5e-93 347.1 348 50.9
EL10Ac3g05418 Beta vulgaris HOM05D004727 ORTHO05D005788 2.0e-93 346.7 249 63.9
HanXRQChr05g0130171 Helianthus annuus HOM05D004727 ORTHO05D005788 4.4e-93 345.5 250 63.2
Sc25g0000700 Simmondsia chinensis HOM05D004727 ORTHO05D005788 4.4e-93 345.5 248 62.5
CDE11G0547 Ceratophyllum demersum HOM05D004727 ORTHO05D005788 5.7e-93 345.1 231 67.5
Os06g0103700 Oryza sativa ssp. japonica HOM05D004727 ORTHO05D005788 9.8e-93 344.4 251 62.2
HPP92_025470 Vanilla planifolia HOM05D004727 ORTHO05D005788 1.7e-92 343.6 247 62.8
ClCG05G008410 Citrullus lanatus HOM05D004727 ORTHO05D005788 4.9e-92 342.0 281 58.7
Glyma.09G131800 Glycine max HOM05D004727 ORTHO05D005788 1.4e-91 340.5 248 62.9
SalBow4G1885 Salvia bowleyana HOM05D004727 ORTHO05D005788 2.4e-91 339.7 374 47.9
VMungo0464G2071 Vigna mungo HOM05D004727 ORTHO05D005788 1.6e-90 337.0 248 62.1
Phvul.004G108600 Phaseolus vulgaris HOM05D004727 ORTHO05D005788 2.0e-90 336.7 248 61.7
Hund04788 Selenicereus undatus HOM05D004727 ORTHO05D005788 4.5e-90 335.5 241 61.4
Nitab4.5_0000084g0450 Nicotiana tabacum HOM05D004727 ORTHO05D005788 7.8e-90 334.7 366 48.6
Nitab4.5_0000084g0460 Nicotiana tabacum HOM05D004727 ORTHO05D005788 7.8e-90 334.7 251 60.6
CiPaw.05G262100 Carya illinoinensis HOM05D004727 ORTHO05D005788 1.3e-89 334.0 230 64.3
MELO3C006936.2 Cucumis melo HOM05D004727 ORTHO05D005788 8.6e-89 331.3 248 62.9
Ah.06g181400 Amaranthus hybridus HOM05D004727 ORTHO05D005788 1.1e-88 330.9 247 60.7
Nitab4.5_0008522g0030 Nicotiana tabacum HOM05D004727 ORTHO05D005788 1.5e-88 330.5 251 60.2
CANSAT21G0167 Cannabis sativa HOM05D004727 ORTHO05D005788 5.6e-88 328.6 247 60.3
CANSAT21G2173 Cannabis sativa HOM05D004727 ORTHO05D005788 5.6e-88 328.6 247 60.3
CAN.G126.24 Capsicum annuum HOM05D004727 ORTHO05D005788 1.2e-87 327.4 249 59.8
Solyc03g007920.4 Solanum lycopersicum HOM05D004727 ORTHO05D005788 2.8e-87 326.2 232 63.4
Manes.06G152600 Manihot esculenta HOM05D004727 ORTHO05D005788 1.4e-86 323.9 217 67.3
PGSC0003DMG400009500 Solanum tuberosum HOM05D004727 ORTHO05D005788 1.4e-86 323.9 232 62.5
Duzib068G1006 Durio zibethinus HOM05D004727 ORTHO05D005788 1.8e-86 323.6 217 65.4
Sopen03g003870 Solanum pennellii HOM05D004727 ORTHO05D005788 1.8e-86 323.6 232 62.9
SEGI_23205 Sequoiadendron giganteum HOM05D004727 ORTHO05D005788 4.0e-86 322.4 309 51.8
Hund11719 Selenicereus undatus HOM05D004727 ORTHO05D005788 5.2e-86 322.0 254 60.2
Dinv35254 Davidia involucrata HOM05D004727 ORTHO05D005788 1.2e-85 320.9 201 73.6
AT4G25720 Arabidopsis thaliana HOM05D004727 ORTHO05D005788 3.4e-85 319.3 220 66.8
SGA_v2.0_scaffold60G21112 Striga asiatica HOM05D004727 ORTHO05D005788 1.3e-84 317.4 260 59.2
Lalb_Chr19g0130651 Lupinus albus HOM05D004727 ORTHO05D005788 1.1e-83 314.3 258 57.0
AUR62021119 Chenopodium quinoa HOM05D004727 ORTHO05D005788 3.2e-83 312.8 326 52.1
AUR62031423 Chenopodium quinoa HOM05D004727 ORTHO05D005788 1.7e-81 307.0 318 50.3
arahy.Tifrunner.gnm1.ann1.G1I5XM Arachis hypogaea HOM05D004727 ORTHO05D005788 3.0e-81 306.2 249 57.8
Cpa.g.sc107.111 Carica papaya HOM05D004727 ORTHO05D005788 3.0e-81 306.2 276 55.1
HPP92_025401 Vanilla planifolia HOM05D004727 ORTHO05D005788 3.0e-81 306.2 226 61.9
EL10Ac4g07582 Beta vulgaris HOM05D004727 ORTHO05D005788 6.8e-78 295.0 320 47.8
Pp3c10_5500 Physcomitrium patens HOM05D004727 ORTHO05D005788 1.1e-72 277.7 229 55.9
SMO351G0007 Selaginella moellendorffii HOM05D004727 ORTHO05D005788 1.5e-72 277.3 246 53.7
Mapoly0062s0028 Marchantia polymorpha HOM05D004727 ORTHO05D005788 5.6e-72 275.4 229 55.9
AUR62036451 Chenopodium quinoa HOM05D004727 ORTHO05D005788 8.1e-71 271.6 236 55.5
arahy.Tifrunner.gnm1.ann1.NE53A1 Arachis hypogaea HOM05D004727 ORTHO05D005788 6.8e-70 268.5 230 56.5
MSTRG.27085 Avicennia marina HOM05D004727 ORTHO05D005788 3.4e-69 266.2 190 63.2
CBR_g3311 Chara braunii HOM05D004727 ORTHO05D005788 6.4e-68 261.9 232 53.0
CBR_g3313 Chara braunii HOM05D004727 ORTHO05D005788 6.4e-68 261.9 232 53.0
Ciclev10005858m.g Citrus clementina HOM05D004727 ORTHO05D005788 3.0e-65 253.1 170 66.5
AUR62017096 Chenopodium quinoa HOM05D004727 ORTHO05D005788 4.3e-64 249.2 211 56.9
CBR_g727 Chara braunii HOM05D004727 ORTHO05D005788 5.6e-64 248.8 232 50.9
FAN03G2629 Fragaria x ananassa HOM05D004727 ORTHO05D005788 1.4e-62 244.2 216 54.6
Zm00001eb268480 Zea mays HOM05D004727 ORTHO05D005788 1.3e-57 227.6 168 61.3
MBI12_g08716_MAGBIO Magnolia biondii HOM05D004727 ORTHO05D005788 1.5e-56 224.2 198 58.1
QL09p012782 Quercus lobata HOM05D004727 ORTHO05D005788 5.6e-56 222.2 154 62.3
Cre11.g476150 Chlamydomonas reinhardtii HOM05D004727 ORTHO05D005788 4.8e-55 219.2 241 42.7
Peaxi162Scf00444g00021 Petunia axillaris HOM05D004727 ORTHO05D005788 7.6e-53 211.8 213 51.2
SMO231G0015 Selaginella moellendorffii HOM05D004727 ORTHO05D005788 8.4e-52 208.4 193 52.8
Actinidia31840 Actinidia chinensis HOM05D004727 ORTHO05D005788 1.1e-51 208.0 140 65.7
Ah.13g069160 Amaranthus hybridus HOM05D004727 ORTHO05D005788 7.1e-51 205.3 161 57.8
DCAR_024607 Daucus carota HOM05D004727 ORTHO05D005788 1.5e-48 197.6 161 59.0
AUR62036407 Chenopodium quinoa HOM05D004727 ORTHO05D005788 2.8e-47 193.4 212 47.2
MCO01G501 Micromonas commoda HOM05D004727 ORTHO05D005788 1.1e-46 191.4 237 39.7
DCAR_008880 Daucus carota HOM05D001628 ORTHO05D001568 2.7e-42 176.8 116 67.2
PRCOL_00002776 Prasinoderma coloniale HOM05D004727 ORTHO05D005788 2.3e-41 173.7 300 35.3
AagrBONN_evm.TU.Sc2ySwM_344.2696 Anthoceros agrestis HOM05D004727 ORTHO05D005788 2.5e-40 170.2 132 58.3
SEGI_30519 Sequoiadendron giganteum HOM05D004727 ORTHO05D005788 6.0e-34 149.1 108 61.1
arahy.Tifrunner.gnm1.ann1.FZN7A9 Arachis hypogaea HOM05D004727 ORTHO05D005788 3.0e-33 146.7 196 39.8
Actinidia31841 Actinidia chinensis HOM05D004727 ORTHO05D005788 3.7e-31 139.8 162 47.5
EL10Ac4g07580 Beta vulgaris HOM05D004727 ORTHO05D005788 8.4e-28 128.6 109 55.0
FAN01G2810 Fragaria x ananassa HOM05D000427 ORTHO05D000386 1.4e-22 111.3 71 71.8
QL09p012777 Quercus lobata HOM05D004727 ORTHO05D005788 5.3e-22 109.4 154 45.5
SHI13754 Sapria himalayana HOM05D004727 ORTHO05D005788 1.7e-20 104.4 110 49.1
SEGI_06548 Sequoiadendron giganteum HOM05D004727 ORTHO05D005788 6.5e-20 102.4 75 58.7
Ciclev10006767m.g Citrus clementina HOM05D004727 ORTHO05D005788 3.6e-18 96.7 64 65.6
Mapoly1114s0001 Marchantia polymorpha HOM05D004727 ORTHO05D005788 3.9e-17 93.2 72 55.6
ECA233G3504 Erigeron canadensis HOM05D004727 ORTHO05D005788 6.7e-17 92.4 141 40.4
TWI39G0716 Tripterygium wilfordii HOM05D001943 ORTHO05D001969 1.5e-16 91.3 72 56.9
MD14G1086700 Malus domestica HOM05D004727 ORTHO05D005788 3.2e-11 73.6 46 76.1
Ah.13g069170 Amaranthus hybridus HOM05D004727 ORTHO05D005788 1.6e-10 71.2 120 37.5
Medtr4g012780 Medicago truncatula HOM05D004727 ORTHO05D005788 7.9e-10 68.9 36 80.6
Hund04787 Selenicereus undatus HOM05D021542 ORTHO05D383482 6.3e-07 59.3 43 55.8


User provided reference genes

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