Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G5154 Papaver somniferum HOM05D006678 ORTHO05D008388 2.0e-61 238.8 113 100.0
PSO063G3868 Papaver somniferum HOM05D006678 ORTHO05D008388 2.7e-58 228.4 113 96.5
Nn1g01909 Nelumbo nucifera HOM05D006678 ORTHO05D008388 3.8e-44 181.4 111 77.5
Duzib177G0619 Durio zibethinus HOM05D006678 ORTHO05D008388 1.6e-42 176.0 104 79.8
Ciclev10023015m.g Citrus clementina HOM05D006678 ORTHO05D008388 2.7e-42 175.3 105 79.0
TAR629G1392 Trochodendron aralioides HOM05D006678 ORTHO05D008388 4.7e-42 174.5 108 77.8
Thecc.05G213400 Theobroma cacao HOM05D006678 ORTHO05D008388 8.0e-42 173.7 104 79.8
Gohir.A13G156100 Gossypium hirsutum HOM05D006678 ORTHO05D008388 2.3e-41 172.2 89 87.6
Manes.09G127100 Manihot esculenta HOM05D006678 ORTHO05D008388 4.0e-41 171.4 111 73.0
MELO3C024729.2 Cucumis melo HOM05D006678 ORTHO05D008388 6.8e-41 170.6 105 75.2
Duzib106G0454 Durio zibethinus HOM05D006678 ORTHO05D008388 6.8e-41 170.6 104 77.9
Gohir.D13G161000 Gossypium hirsutum HOM05D006678 ORTHO05D008388 8.8e-41 170.2 89 86.5
Gorai.013G181600 Gossypium raimondii HOM05D006678 ORTHO05D008388 8.8e-41 170.2 89 86.5
RcHm_v2.0_Chr1g0384211 Rosa chinensis HOM05D006678 ORTHO05D008388 1.2e-40 169.9 105 78.1
CsaV3_2G036030 Cucumis sativus L. HOM05D006678 ORTHO05D008388 1.5e-40 169.5 105 75.2
COL.COLO4_11805 Corchorus olitorius HOM05D006678 ORTHO05D008388 2.6e-40 168.7 104 76.9
Psat7g171800 Pisum sativum HOM05D006678 ORTHO05D008388 2.6e-40 168.7 105 74.3
THA.LOC104827215 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 2.6e-40 168.7 105 77.1
Glyma.11G091800 Glycine max HOM05D006678 ORTHO05D008388 3.4e-40 168.3 105 75.2
Potri.013G082100 Populus trichocarpa HOM05D006678 ORTHO05D008388 3.4e-40 168.3 109 73.4
Prupe.2G326100 Prunus persica HOM05D006678 ORTHO05D008388 3.4e-40 168.3 104 76.9
Ca_04918_v3 Cicer arietinum L. HOM05D006678 ORTHO05D008388 4.4e-40 167.9 105 73.3
Lalb_Chr01g0000921 Lupinus albus HOM05D006678 ORTHO05D008388 4.4e-40 167.9 104 76.0
MD01G1236000 Malus domestica HOM05D006678 ORTHO05D008388 4.4e-40 167.9 105 76.2
THA.LOC104802920 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 4.4e-40 167.9 105 77.1
Atru.chr12.1964 Acer truncatum HOM05D006678 ORTHO05D008388 5.7e-40 167.5 106 76.4
Lalb_Chr03g0024411 Lupinus albus HOM05D006678 ORTHO05D008388 5.7e-40 167.5 107 72.0
Medtr4g077807 Medicago truncatula HOM05D006678 ORTHO05D008388 5.7e-40 167.5 105 74.3
GSVIVG01024408001 Vitis vinifera HOM05D006678 ORTHO05D008388 5.7e-40 167.5 105 75.2
ClCG02G007680 Citrullus lanatus HOM05D006678 ORTHO05D008388 9.8e-40 166.8 105 72.4
Phvul.011G020300 Phaseolus vulgaris HOM05D006678 ORTHO05D008388 9.8e-40 166.8 105 75.2
QL09p024031 Quercus lobata HOM05D006678 ORTHO05D008388 9.8e-40 166.8 104 75.0
VMungo1127G1968 Vigna mungo HOM05D006678 ORTHO05D008388 9.8e-40 166.8 105 74.3
Lj3g0002487 Lotus japonicus HOM05D006678 ORTHO05D008388 1.7e-39 166.0 111 72.1
TPR.G27187 Trifolium pratense HOM05D006678 ORTHO05D008388 1.7e-39 166.0 105 73.3
FAN10G1380 Fragaria x ananassa HOM05D006678 ORTHO05D008388 2.8e-39 165.2 105 74.3
Aqoxy3G02158 Aquilegia oxysepala HOM05D006678 ORTHO05D008388 6.3e-39 164.1 123 68.3
FAN01G1466 Fragaria x ananassa HOM05D006678 ORTHO05D008388 1.1e-38 163.3 105 74.3
CiPaw.06G032600 Carya illinoinensis HOM05D006678 ORTHO05D008388 1.4e-38 162.9 105 72.4
TWI39G0757 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 1.4e-38 162.9 105 73.3
FAN03G1679 Fragaria x ananassa HOM05D006678 ORTHO05D008388 1.8e-38 162.5 105 73.3
FvH4_7g33980 Fragaria vesca HOM05D006678 ORTHO05D008388 2.4e-38 162.2 105 73.3
TWI38G1314 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 2.4e-38 162.2 86 84.9
Glyma.12G017800 Glycine max HOM05D006678 ORTHO05D008388 4.1e-38 161.4 105 73.3
Sabra13G0070800 Salix brachista HOM05D006678 ORTHO05D008388 5.4e-38 161.0 88 83.0
PGR042G1336 Punica granatum HOM05D006678 ORTHO05D008388 7.0e-38 160.6 111 70.3
arahy.Tifrunner.gnm1.ann1.Z69A25 Arachis hypogaea HOM05D006678 ORTHO05D008388 9.1e-38 160.2 105 70.5
CANSAT21G1467 Cannabis sativa HOM05D006678 ORTHO05D008388 9.1e-38 160.2 105 70.5
ATR0829G044 Amborella trichopoda HOM05D006678 ORTHO05D008388 2.0e-37 159.1 103 72.8
Sp3g02110 Schrenkiella parvula HOM05D006678 ORTHO05D008388 3.5e-37 158.3 114 69.3
C05p63740 Brassica napus HOM05D006678 ORTHO05D008388 4.5e-37 157.9 123 65.0
CARHR077080 Cardamine hirsuta HOM05D006678 ORTHO05D008388 4.5e-37 157.9 113 69.0
Aa31LG5G13550 Aethionema arabicum HOM05D006678 ORTHO05D008388 7.7e-37 157.1 113 69.0
AT3G03070 Arabidopsis thaliana HOM05D006678 ORTHO05D008388 7.7e-37 157.1 113 69.0
Thhalv10021803m.g Eutrema salsugineum HOM05D006678 ORTHO05D008388 7.7e-37 157.1 113 69.0
Oeu031704.1 Olea europaea HOM05D006678 ORTHO05D008388 1.0e-36 156.8 111 69.4
Sed0006085 Sechium edule HOM05D006678 ORTHO05D008388 1.3e-36 156.4 106 73.6
AL3G12580 Arabidopsis lyrata HOM05D006678 ORTHO05D008388 2.9e-36 155.2 113 68.1
BcaB04g21385 Brassica carinata HOM05D006678 ORTHO05D008388 2.9e-36 155.2 114 68.4
BolC5t35043H Brassica oleracea HOM05D006678 ORTHO05D008388 2.9e-36 155.2 115 67.0
SGA_v2.0_scaffold50G18440 Striga asiatica HOM05D006678 ORTHO05D008388 2.9e-36 155.2 113 65.5
Nitab4.5_0011186g0030 Nicotiana tabacum HOM05D006678 ORTHO05D008388 3.8e-36 154.8 113 66.4
Carub.0003s0222 Capsella rubella HOM05D006678 ORTHO05D008388 8.5e-36 153.7 113 67.3
CDE03G0140 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 8.5e-36 153.7 110 66.4
Nitab4.5_0000021g0500 Nicotiana tabacum HOM05D006678 ORTHO05D008388 8.5e-36 153.7 113 65.5
A05p44110 Brassica napus HOM05D006678 ORTHO05D008388 1.1e-35 153.3 115 66.1
BolC1t05850H Brassica oleracea HOM05D006678 ORTHO05D008388 1.1e-35 153.3 114 66.7
BraSC90t46700Z Brassica rapa HOM05D006678 ORTHO05D008388 1.1e-35 153.3 115 66.1
Migut.F00948 Erythranthe guttata HOM05D006678 ORTHO05D008388 1.9e-35 152.5 113 64.6
Actinidia34306 Actinidia chinensis HOM05D006678 ORTHO05D008388 2.5e-35 152.1 114 66.7
HanXRQChr03g0088421 Helianthus annuus HOM05D006678 ORTHO05D008388 2.5e-35 152.1 105 66.7
Lsat_1_v5_gn_9_47480 Lactuca sativa HOM05D006678 ORTHO05D008388 2.5e-35 152.1 115 63.5
BNapus_Darmor_BZH_scaffold_129p00040 Brassica napus HOM05D006678 ORTHO05D008388 3.2e-35 151.8 114 65.8
CDE06G2089 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 4.2e-35 151.4 86 79.1
BraA01t04595Z Brassica rapa HOM05D006678 ORTHO05D008388 5.5e-35 151.0 114 65.8
Actinidia18705 Actinidia chinensis HOM05D006678 ORTHO05D008388 7.2e-35 150.6 110 67.3
MSTRG.26930 Avicennia marina HOM05D006678 ORTHO05D008388 7.2e-35 150.6 113 64.6
Rhsim03G0221400 Rhododendron simsii HOM05D006678 ORTHO05D008388 7.2e-35 150.6 109 67.9
CSS0031072 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 9.5e-35 150.2 119 62.2
Dinv17257 Davidia involucrata HOM05D006678 ORTHO05D008388 1.2e-34 149.8 114 64.9
Dinv29159 Davidia involucrata HOM05D006678 ORTHO05D008388 3.6e-34 148.3 114 67.5
Hund09791 Selenicereus undatus HOM05D006678 ORTHO05D008388 3.6e-34 148.3 90 75.6
Gorai.013G182200 Gossypium raimondii HOM05D006678 ORTHO05D008388 4.7e-34 147.9 85 78.8
Peaxi162Scf00133g00723 Petunia axillaris HOM05D006678 ORTHO05D008388 6.1e-34 147.5 113 63.7
CSS0016806 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 8.0e-34 147.1 125 58.4
Solyc03g097010.3 Solanum lycopersicum HOM05D006678 ORTHO05D008388 8.0e-34 147.1 114 64.9
Sopen03g027760 Solanum pennellii HOM05D006678 ORTHO05D008388 8.0e-34 147.1 114 64.9
DCAR_009010 Daucus carota HOM05D006678 ORTHO05D008388 1.4e-33 146.4 121 61.2
Hma1.2p1_1680F.1_g297200 Hydrangea macrophylla HOM05D006678 ORTHO05D008388 1.8e-33 146.0 114 62.3
vmacro06510 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 4.0e-33 144.8 120 61.7
unitig_90.g27534 Utricularia gibba HOM05D006678 ORTHO05D008388 2.6e-32 142.1 106 64.2
Cc02_g00280 Coffea canephora HOM05D006678 ORTHO05D008388 3.4e-32 141.7 113 61.1
SalBow2G2234 Salvia bowleyana HOM05D006678 ORTHO05D008388 2.2e-31 139.0 113 59.3
EL10Ac3g05077 Beta vulgaris HOM05D006678 ORTHO05D008388 6.3e-31 137.5 89 71.9
AUR62028176 Chenopodium quinoa HOM05D006678 ORTHO05D008388 8.3e-31 137.1 89 70.8
Oeu063732.2 Olea europaea HOM05D006678 ORTHO05D008388 1.8e-30 136.0 166 48.2
AUR62002062 Chenopodium quinoa HOM05D006678 ORTHO05D008388 3.1e-30 135.2 89 70.8
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 9.2e-30 133.7 66 89.4
AagrBONN_evm.TU.Sc2ySwM_368.1248 Anthoceros agrestis HOM05D006678 ORTHO05D008388 1.2e-29 133.3 104 58.7
Zm00001eb172200 Zea mays HOM05D006678 ORTHO05D008388 1.0e-28 130.2 76 76.3
Os08g0161700 Oryza sativa ssp. japonica HOM05D006678 ORTHO05D008388 2.3e-28 129.0 80 71.2
vmacro22173 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 2.3e-28 129.0 64 89.1
CAN.G1131.11 Capsicum annuum HOM05D006678 ORTHO05D008388 8.6e-28 127.1 66 83.3
Mapoly0006s0269 Marchantia polymorpha HOM05D006678 ORTHO05D008388 1.5e-27 126.3 73 75.3
Duzib128G0155 Durio zibethinus HOM05D006678 ORTHO05D008388 4.3e-27 124.8 77 74.0
Nitab4.5_0000011g0100 Nicotiana tabacum HOM05D006678 ORTHO05D008388 3.6e-26 121.7 65 83.1
Pp3c24_2620 Physcomitrium patens HOM05D006678 ORTHO05D008388 4.7e-26 121.3 93 63.4
SMO239G0055 Selaginella moellendorffii HOM05D006678 ORTHO05D008388 1.0e-25 120.2 71 71.8
SEGI_28569 Sequoiadendron giganteum HOM05D006678 ORTHO05D008388 2.3e-25 119.0 62 83.9
ECA232G0519 Erigeron canadensis HOM05D006678 ORTHO05D008388 2.6e-24 115.5 94 60.6
Pp3c23_13320 Physcomitrium patens HOM05D006678 ORTHO05D008388 3.7e-23 111.7 72 70.8
Ah.13g072760 Amaranthus hybridus HOM05D006678 ORTHO05D008388 1.1e-22 110.2 65 80.0
PRCOL_00006130 Prasinoderma coloniale HOM05D006678 ORTHO05D008388 6.2e-18 94.4 81 56.8
Gohir.D13G160300 Gossypium hirsutum HOM05D006678 ORTHO05D008388 8.0e-18 94.0 67 71.6
arahy.Tifrunner.gnm1.ann1.GV73NI Arachis hypogaea HOM05D006678 ORTHO05D008388 3.1e-17 92.0 68 66.2
Cre03.g178250 Chlamydomonas reinhardtii HOM05D006678 ORTHO05D008388 2.9e-15 85.5 75 57.3
Sc06g0002530 Simmondsia chinensis HOM05D002239 ORTHO05D002408 9.2e-14 80.5 55 72.7
Zm00001eb415610 Zea mays HOM05D006678 ORTHO05D008388 7.3e-11 70.9 38 81.6
CBR_g6679 Chara braunii HOM05D006678 ORTHO05D008388 5.2e-09 64.7 35 74.3


User provided reference genes

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