Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G4988 Papaver somniferum HOM05D003137 ORTHO05D003433 3.0e-122 441.8 215 100.0
PSO478G4699 Papaver somniferum HOM05D003137 ORTHO05D003433 1.1e-28 131.0 136 53.7
FAN14G4002 Fragaria x ananassa HOM05D003137 ORTHO05D003433 1.0e-13 81.3 197 34.0
Sed0002741 Sechium edule HOM05D003137 ORTHO05D003433 2.3e-13 80.1 196 33.2
MELO3C019066.2 Cucumis melo HOM05D003137 ORTHO05D003433 3.0e-13 79.7 195 32.8
CsaV3_4G029720 Cucumis sativus L. HOM05D003137 ORTHO05D003433 3.0e-13 79.7 195 32.8
FvH4_6g43560 Fragaria vesca HOM05D003137 ORTHO05D003433 3.9e-13 79.3 197 33.5
Sp4g14700 Schrenkiella parvula HOM05D003137 ORTHO05D003433 5.1e-13 79.0 196 32.7
PSO478G5260 Papaver somniferum HOM05D003137 ORTHO05D304568 6.7e-13 78.6 80 48.8
EL10Ac8g19786 Beta vulgaris HOM05D003137 ORTHO05D003433 1.9e-12 77.0 193 33.2
Thhalv10016614m.g Eutrema salsugineum HOM05D003137 ORTHO05D003433 1.9e-12 77.0 196 32.7
Aa31LG5G4220 Aethionema arabicum HOM05D003137 ORTHO05D003433 2.5e-12 76.6 196 32.1
Carub.0004s1367 Capsella rubella HOM05D003137 ORTHO05D003433 2.5e-12 76.6 196 32.1
BcaB01g03986 Brassica carinata HOM05D003137 ORTHO05D003433 3.3e-12 76.3 196 33.2
FAN05G0260 Fragaria x ananassa HOM05D003137 ORTHO05D003433 3.3e-12 76.3 197 33.0
Manes.13G073300 Manihot esculenta HOM05D003137 ORTHO05D003433 3.3e-12 76.3 195 30.3
AL4G27690 Arabidopsis lyrata HOM05D003137 ORTHO05D003433 5.6e-12 75.5 196 32.1
Potri.007G121400 Populus trichocarpa HOM05D003137 ORTHO05D003433 5.6e-12 75.5 196 31.6
BcaC01g05910 Brassica carinata HOM05D003137 ORTHO05D003433 7.4e-12 75.1 196 32.1
C03p21160 Brassica napus HOM05D003137 ORTHO05D003433 7.4e-12 75.1 196 32.1
FAN09G4236 Fragaria x ananassa HOM05D003137 ORTHO05D003433 7.4e-12 75.1 192 32.8
A03p18130 Brassica napus HOM05D003137 ORTHO05D003433 9.6e-12 74.7 196 32.1
BraA03t11072Z Brassica rapa HOM05D003137 ORTHO05D003433 9.6e-12 74.7 196 32.1
MD17G1092500 Malus domestica HOM05D003137 ORTHO05D003433 9.6e-12 74.7 196 32.1
Medtr2g088870 Medicago truncatula HOM05D003137 ORTHO05D003433 9.6e-12 74.7 189 32.3
Actinidia11210 Actinidia chinensis HOM05D003137 ORTHO05D003433 1.3e-11 74.3 196 32.1
BolC3t14499H Brassica oleracea HOM05D003137 ORTHO05D003433 1.3e-11 74.3 196 32.1
Dinv39684 Davidia involucrata HOM05D003137 ORTHO05D003433 1.3e-11 74.3 196 32.7
RcHm_v2.0_Chr2g0160141 Rosa chinensis HOM05D003137 ORTHO05D003433 1.3e-11 74.3 197 32.5
COL.COLO4_12992 Corchorus olitorius HOM05D003137 ORTHO05D003433 1.6e-11 73.9 196 31.6
MD09G1104800 Malus domestica HOM05D003137 ORTHO05D003433 1.6e-11 73.9 196 31.6
CANSAT64G2088 Cannabis sativa HOM05D003137 ORTHO05D003433 2.1e-11 73.6 196 31.1
Gohir.A11G084600 Gossypium hirsutum HOM05D003137 ORTHO05D003433 2.1e-11 73.6 196 29.6
Potri.017G039000 Populus trichocarpa HOM05D003137 ORTHO05D003433 2.1e-11 73.6 196 31.6
Prupe.3G220700 Prunus persica HOM05D003137 ORTHO05D003433 2.1e-11 73.6 196 31.6
AT2G32295 Arabidopsis thaliana HOM05D003137 ORTHO05D003433 2.8e-11 73.2 196 31.6
Nn6g34282 Nelumbo nucifera HOM05D003137 ORTHO05D003433 2.8e-11 73.2 196 30.6
GSVIVG01030627001 Vitis vinifera HOM05D003137 ORTHO05D003433 2.8e-11 73.2 196 31.6
Atru.chr6.3141 Acer truncatum HOM05D003137 ORTHO05D003433 3.6e-11 72.8 196 31.1
CSS0004570 Camellia sinensis var. sinensis HOM05D003137 ORTHO05D003433 3.6e-11 72.8 196 32.1
CARHR126140 Cardamine hirsuta HOM05D003137 ORTHO05D003433 3.6e-11 72.8 196 31.1
Migut.C00698 Erythranthe guttata HOM05D003137 ORTHO05D003433 3.6e-11 72.8 195 31.3
Gorai.002G016400 Gossypium raimondii HOM05D003137 ORTHO05D003433 3.6e-11 72.8 196 29.6
Phvul.005G113400 Phaseolus vulgaris HOM05D003137 ORTHO05D003433 3.6e-11 72.8 189 31.7
Ciclev10015128m.g Citrus clementina HOM05D003137 ORTHO05D003433 4.8e-11 72.4 195 31.3
Gohir.A01G013400 Gossypium hirsutum HOM05D003137 ORTHO05D003433 4.8e-11 72.4 196 29.6
HanXRQChr17g0560951 Helianthus annuus HOM05D003137 ORTHO05D003433 4.8e-11 72.4 196 32.1
CSS0047433 Camellia sinensis var. sinensis HOM05D003137 ORTHO05D003433 6.2e-11 72.0 189 32.3
COL.COLO4_12634 Corchorus olitorius HOM05D003137 ORTHO05D003433 6.2e-11 72.0 196 30.1
Duzib138G0678 Durio zibethinus HOM05D003137 ORTHO05D003433 6.2e-11 72.0 196 30.1
Glyma.13G306500 Glycine max HOM05D003137 ORTHO05D003433 6.2e-11 72.0 190 31.6
Gohir.D01G014700 Gossypium hirsutum HOM05D003137 ORTHO05D003433 6.2e-11 72.0 197 31.0
Sopen04g033640 Solanum pennellii HOM05D003137 ORTHO05D003433 6.2e-11 72.0 196 31.6
THA.LOC104827598 Tarenaya hassleriana HOM05D003137 ORTHO05D003433 6.2e-11 72.0 196 30.1
Thecc.02G162600 Theobroma cacao HOM05D003137 ORTHO05D003433 6.2e-11 72.0 196 30.1
Eucgr.K00863 Eucalyptus grandis HOM05D003137 ORTHO05D003433 8.1e-11 71.6 196 30.6
Gohir.D11G088700 Gossypium hirsutum HOM05D003137 ORTHO05D003433 8.1e-11 71.6 196 29.1
Gorai.007G094800 Gossypium raimondii HOM05D003137 ORTHO05D003433 8.1e-11 71.6 196 29.1
Os12g0595000 Oryza sativa ssp. japonica HOM05D003137 ORTHO05D003433 8.1e-11 71.6 190 33.7
THA.LOC104802010 Tarenaya hassleriana HOM05D003137 ORTHO05D003433 8.1e-11 71.6 195 30.3
PGR042G2833 Punica granatum HOM05D003137 ORTHO05D003433 1.1e-10 71.2 198 30.8
CAN.G1126.28 Capsicum annuum HOM05D003137 ORTHO05D003433 1.4e-10 70.9 196 31.6
Rhsim07G0131000 Rhododendron simsii HOM05D003137 ORTHO05D003433 1.4e-10 70.9 202 30.2
Sc21g0001670 Simmondsia chinensis HOM05D003137 ORTHO05D003433 1.4e-10 70.9 196 30.6
Sopen07g012160 Solanum pennellii HOM05D003137 ORTHO05D003433 1.4e-10 70.9 196 32.1
TWI18G1074 Tripterygium wilfordii HOM05D003137 ORTHO05D003433 1.4e-10 70.9 196 30.6
Aqoxy7G03817 Aquilegia oxysepala HOM05D003137 ORTHO05D003433 1.8e-10 70.5 195 30.8
CiPaw.03G163200 Carya illinoinensis HOM05D003137 ORTHO05D003433 2.4e-10 70.1 196 30.6
Lsat_1_v5_gn_8_129381 Lactuca sativa HOM05D003137 ORTHO05D003433 2.4e-10 70.1 196 31.6
Solyc04g080050.4 Solanum lycopersicum HOM05D003137 ORTHO05D003433 2.4e-10 70.1 196 31.1
Solyc07g022830.3 Solanum lycopersicum HOM05D003137 ORTHO05D003433 2.4e-10 70.1 196 32.1
Lalb_Chr24g0393061 Lupinus albus HOM05D003137 ORTHO05D003433 3.1e-10 69.7 191 30.9
Phvul.008G069800 Phaseolus vulgaris HOM05D003137 ORTHO05D003433 3.1e-10 69.7 190 30.5
Ciclev10020261m.g Citrus clementina HOM05D003137 ORTHO05D003433 4.0e-10 69.3 197 29.9
Medtr7g076560 Medicago truncatula HOM05D003137 ORTHO05D003433 4.0e-10 69.3 189 31.2
ATR0787G213 Amborella trichopoda HOM05D003137 ORTHO05D003433 5.3e-10 68.9 196 31.6
ECA233G5037 Erigeron canadensis HOM05D003137 ORTHO05D003433 5.3e-10 68.9 196 30.6
Thecc.01G369700 Theobroma cacao HOM05D003137 ORTHO05D003433 5.3e-10 68.9 196 29.6
HPP92_010507 Vanilla planifolia HOM05D003137 ORTHO05D003433 5.3e-10 68.9 196 30.6
Aa31LG5G17560 Aethionema arabicum HOM05D003137 ORTHO05D003433 6.9e-10 68.6 195 30.3
AT5G35730 Arabidopsis thaliana HOM05D003137 ORTHO05D003433 6.9e-10 68.6 196 29.6
Gohir.A12G103350 Gossypium hirsutum HOM05D003137 ORTHO05D003433 6.9e-10 68.6 197 29.9
Lalb_Chr01g0021071 Lupinus albus HOM05D003137 ORTHO05D003433 6.9e-10 68.6 190 31.1
PSO478G0754 Papaver somniferum HOM05D003137 ORTHO05D003433 6.9e-10 68.6 196 31.6
Sp7g06520 Schrenkiella parvula HOM05D003137 ORTHO05D003433 6.9e-10 68.6 195 30.3
VMungo1383G1713 Vigna mungo HOM05D003137 ORTHO05D003433 6.9e-10 68.6 189 31.2
AL7G44570 Arabidopsis lyrata HOM05D003137 ORTHO05D003433 9.0e-10 68.2 195 30.3
BcaB06g26976 Brassica carinata HOM05D003137 ORTHO05D003433 9.0e-10 68.2 195 30.3
BcaC02g09490 Brassica carinata HOM05D003137 ORTHO05D003433 9.0e-10 68.2 195 30.3
A04p09900 Brassica napus HOM05D003137 ORTHO05D003433 9.0e-10 68.2 195 30.3
C04p43380 Brassica napus HOM05D003137 ORTHO05D003433 9.0e-10 68.2 195 30.3
BolC4t25916H Brassica oleracea HOM05D003137 ORTHO05D003433 9.0e-10 68.2 195 30.3
BraA04t16653Z Brassica rapa HOM05D003137 ORTHO05D003433 9.0e-10 68.2 195 30.3
Carub.0007s3147 Capsella rubella HOM05D003137 ORTHO05D003433 9.0e-10 68.2 195 30.3
CARHR216920 Cardamine hirsuta HOM05D003137 ORTHO05D003433 9.0e-10 68.2 195 30.3
Thhalv10004243m.g Eutrema salsugineum HOM05D003137 ORTHO05D003433 9.0e-10 68.2 195 30.3
Gorai.008G116200 Gossypium raimondii HOM05D003137 ORTHO05D003433 1.2e-09 67.8 196 29.6
Hma1.2p1_0613F.1_g189210 Hydrangea macrophylla HOM05D003137 ORTHO05D003433 1.2e-09 67.8 196 30.6
Nn7g38434 Nelumbo nucifera HOM05D003137 ORTHO05D003433 1.2e-09 67.8 196 30.6
Psat3g112160 Pisum sativum HOM05D003137 ORTHO05D003433 1.2e-09 67.8 195 30.3
Glyma.09G263700 Glycine max HOM05D003137 ORTHO05D003433 1.5e-09 67.4 190 30.5
Nn4g22018 Nelumbo nucifera HOM05D003137 ORTHO05D003433 2.0e-09 67.0 196 30.6
Pp3c15_24780 Physcomitrium patens HOM05D003137 ORTHO05D003433 2.0e-09 67.0 192 29.7
THA.LOC104800980 Tarenaya hassleriana HOM05D003137 ORTHO05D003433 2.0e-09 67.0 196 29.6
Pp3c9_25080 Physcomitrium patens HOM05D003137 ORTHO05D003433 2.6e-09 66.6 193 31.1
Ah.09g232930 Amaranthus hybridus HOM05D001132 ORTHO05D003433 3.4e-09 66.2 189 30.7
Glyma.18G228400 Glycine max HOM05D003137 ORTHO05D003433 4.5e-09 65.9 190 30.5
Gohir.D12G106800 Gossypium hirsutum HOM05D003137 ORTHO05D003433 1.3e-08 64.3 194 28.9
SEGI_18577 Sequoiadendron giganteum HOM05D003137 ORTHO05D003433 1.3e-08 64.3 150 32.0
AUR62027561 Chenopodium quinoa HOM05D003137 ORTHO05D003433 8.4e-08 61.6 189 29.1
Psat5g265400 Pisum sativum HOM05D003137 ORTHO05D003433 1.4e-07 60.8 141 34.0
PSO782G4462 Papaver somniferum HOM05D003137 ORTHO05D003433 1.9e-07 60.5 151 32.5
Atru.chr5.388 Acer truncatum HOM05D003137 ORTHO05D003433 5.5e-07 58.9 143 34.3
SHI10274 Sapria himalayana HOM05D003137 ORTHO05D003433 5.5e-07 58.9 188 27.7
Duzib133G1508 Durio zibethinus HOM05D003137 ORTHO05D003433 2.1e-06 57.0 151 29.1
PGSC0003DMG402027860 Solanum tuberosum HOM05D003137 ORTHO05D003433 2.1e-06 57.0 151 31.8
Mapoly0060s0006 Marchantia polymorpha HOM05D003137 ORTHO05D003433 2.7e-06 56.6 190 30.0


User provided reference genes

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