Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 1.1e-309 1065.8 555 100.0
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 1.3e-291 1005.7 556 94.6
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 3.5e-167 592.4 544 62.5
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 4.0e-163 578.9 508 61.6
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 3.9e-158 562.4 535 60.0
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 4.3e-157 558.9 554 56.5
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 5.7e-157 558.5 500 60.8
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 5.7e-157 558.5 547 56.3
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 7.4e-157 558.1 497 60.8
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 2.8e-156 556.2 540 58.3
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 1.1e-155 554.3 548 56.0
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 5.3e-155 552.0 447 65.1
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 5.3e-155 552.0 447 65.1
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 1.7e-153 547.0 494 60.1
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 6.5e-153 545.0 481 60.5
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 2.5e-152 543.1 492 61.0
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 9.4e-152 541.2 496 58.5
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 6.1e-151 538.5 481 59.7
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 6.1e-151 538.5 506 57.7
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 7.9e-151 538.1 527 57.5
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 1.4e-150 537.3 522 55.6
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 2.3e-150 536.6 489 59.9
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 3.9e-150 535.8 491 59.5
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 5.1e-150 535.4 548 54.6
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 8.8e-150 534.6 478 59.6
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 1.1e-149 534.3 489 58.7
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 1.5e-149 533.9 529 56.5
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 5.7e-149 531.9 488 59.6
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 1.1e-147 527.7 461 61.0
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 3.1e-147 526.2 547 54.3
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 9.1e-147 524.6 510 56.1
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 9.1e-147 524.6 492 58.1
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 3.4e-146 522.7 453 60.7
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 3.4e-146 522.7 492 58.1
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 3.8e-145 519.2 538 55.2
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 6.5e-145 518.5 487 56.9
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 1.9e-144 516.9 469 59.1
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 2.5e-144 516.5 520 55.2
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 5.5e-144 515.4 520 54.2
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 5.5e-144 515.4 506 55.5
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 1.2e-143 514.2 436 61.5
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 2.1e-143 513.5 483 57.1
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 1.4e-142 510.8 550 52.5
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 5.1e-142 508.8 446 59.2
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 8.8e-142 508.1 484 57.2
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 1.5e-141 507.3 489 56.9
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 2.0e-141 506.9 451 60.5
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 2.6e-141 506.5 513 55.6
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 4.8e-140 502.3 466 56.7
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 6.3e-140 501.9 450 58.7
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 9.1e-139 498.0 504 54.8
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 9.1e-139 498.0 512 54.9
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 9.1e-139 498.0 481 57.6
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 1.2e-138 497.7 508 54.9
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.5e-138 497.3 473 56.9
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 2.0e-138 496.9 503 55.1
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 2.0e-138 496.9 503 55.1
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 2.0e-138 496.9 467 56.7
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 5.9e-138 495.4 510 54.7
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 7.7e-138 495.0 484 57.0
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 1.0e-137 494.6 509 54.2
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 2.2e-137 493.4 479 54.3
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 2.2e-137 493.4 509 54.6
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 1.4e-136 490.7 484 55.4
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 2.5e-136 490.0 478 57.1
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 3.2e-136 489.6 404 64.6
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 3.2e-136 489.6 484 55.0
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 4.2e-136 489.2 477 56.8
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 1.2e-135 487.6 510 55.1
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 1.2e-135 487.6 485 55.1
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 2.7e-135 486.5 478 56.5
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 8.0e-135 485.0 534 51.3
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 1.4e-134 484.2 462 57.1
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 1.4e-134 484.2 512 52.3
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 2.3e-134 483.4 547 51.9
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 3.9e-134 482.6 439 60.4
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 1.1e-133 481.1 453 56.5
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 2.0e-133 480.3 513 52.4
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 3.3e-133 479.6 477 56.4
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 5.7e-133 478.8 497 53.1
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 1.3e-132 477.6 485 53.2
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 2.8e-132 476.5 509 53.6
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 1.4e-131 474.2 535 51.4
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 4.1e-131 472.6 515 51.7
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 3.8e-129 466.1 547 51.0
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 4.7e-127 459.1 437 57.0
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 4.7e-127 459.1 523 49.9
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 6.1e-127 458.8 514 51.4
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 6.7e-126 455.3 519 51.1
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 8.8e-126 454.9 516 51.2
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 1.5e-125 454.1 445 55.1
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 4.8e-124 449.1 481 53.6
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 2.7e-122 443.4 470 50.6
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 1.7e-121 440.7 470 51.1
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 4.4e-101 372.9 504 46.8
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 1.3e-100 371.3 445 48.1
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 6.0e-82 309.3 366 46.2
Lj2g0020590 Lotus japonicus HOM05D006947 ORTHO05D008818 2.8e-79 300.4 271 60.1
SalBow8G5231 Salvia bowleyana HOM05D006947 ORTHO05D008818 8.9e-78 295.4 269 59.9
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 5.1e-73 279.6 446 37.7
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 1.9e-72 277.7 276 55.8
Migut.O00818 Erythranthe guttata HOM05D006947 ORTHO05D008818 7.3e-72 275.8 280 54.6
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 3.9e-65 253.4 233 57.9
Cpa.g.sc1084.1 Carica papaya HOM05D006947 ORTHO05D008818 4.8e-63 246.5 234 57.3
SalBow8G4359 Salvia bowleyana HOM05D006947 ORTHO05D008818 1.9e-59 234.6 215 54.9
Nitab4.5_0000532g0050 Nicotiana tabacum HOM05D006947 ORTHO05D008818 2.0e-53 214.5 212 55.2
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 4.5e-53 213.4 171 61.4
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 1.1e-51 208.8 221 54.3
Cpa.g.sc2.239 Carica papaya HOM05D006947 ORTHO05D008818 4.3e-48 196.8 268 45.9
Mapoly0112s0009 Marchantia polymorpha HOM05D006947 ORTHO05D008818 3.2e-35 154.1 297 33.7
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 5.0e-28 130.2 261 32.6
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 2.3e-17 94.7 146 40.4
Psat6g175840 Pisum sativum HOM05D006947 ORTHO05D005363 2.9e-12 77.8 100 46.0
Psat4g128000 Pisum sativum HOM05D002621 ORTHO05D004807 2.7e-10 71.2 103 43.7
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 2.6e-08 64.7 114 35.1
SMO364G0541 Selaginella moellendorffii HOM05D000716 ORTHO05D004822 4.4e-08 63.9 240 25.4
Ah.01g010930 Amaranthus hybridus HOM05D000716 ORTHO05D002658 1.7e-07 62.0 253 22.9
CDE10G1179 Ceratophyllum demersum HOM05D000215 ORTHO05D002239 1.7e-07 62.0 291 26.1
EL10Ac1g01912 Beta vulgaris HOM05D000716 ORTHO05D002658 4.8e-07 60.5 254 25.2
AUR62042575 Chenopodium quinoa HOM05D000716 ORTHO05D002658 8.3e-07 59.7 255 24.3
Oeu059233.1 Olea europaea HOM05D001356 ORTHO05D003895 8.3e-07 59.7 245 27.3
Lalb_Chr23g0268271 Lupinus albus HOM05D002086 ORTHO05D004968 1.4e-06 58.9 172 26.7
FvH4_2g40980 Fragaria vesca HOM05D002086 ORTHO05D004968 4.1e-06 57.4 201 25.4
Lalb_Chr08g0244381 Lupinus albus HOM05D002086 ORTHO05D004968 5.3e-06 57.0 169 27.8


User provided reference genes

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