Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G4816 Papaver somniferum HOM05D007350 ORTHO05D009323 2.0e-83 312.4 161 100.0
PSO063G0872 Papaver somniferum HOM05D007350 ORTHO05D009323 1.9e-81 305.8 161 98.1
Nn4g24553 Nelumbo nucifera HOM05D007350 ORTHO05D009323 2.9e-37 159.1 162 56.8
Thecc.02G055300 Theobroma cacao HOM05D007350 ORTHO05D009323 1.1e-33 147.1 159 52.8
COL.COLO4_17379 Corchorus olitorius HOM05D007350 ORTHO05D009323 4.3e-33 145.2 160 50.6
Gohir.D02G227300 Gossypium hirsutum HOM05D007350 ORTHO05D009323 5.7e-33 144.8 161 53.4
Gorai.005G255200 Gossypium raimondii HOM05D007350 ORTHO05D009323 2.8e-32 142.5 161 52.8
Gohir.A03G205900 Gossypium hirsutum HOM05D007350 ORTHO05D009323 3.7e-32 142.1 161 52.8
MBI19_g01918_MAGBIO Magnolia biondii HOM05D007350 ORTHO05D009323 3.4e-30 135.6 126 58.7
TAR374G1157 Trochodendron aralioides HOM05D007350 ORTHO05D009323 5.9e-30 134.8 98 71.4
Duzib052G1005 Durio zibethinus HOM05D007350 ORTHO05D009323 1.7e-29 133.3 134 53.7
Migut.B01238 Erythranthe guttata HOM05D007350 ORTHO05D009323 2.2e-29 132.9 164 47.6
Aqoxy3G04007 Aquilegia oxysepala HOM05D007350 ORTHO05D009323 2.9e-29 132.5 164 49.4
Haze_02104 Corylus avellana HOM05D007350 ORTHO05D009323 2.9e-29 132.5 167 46.1
Prupe.8G169100 Prunus persica HOM05D007350 ORTHO05D009323 6.5e-29 131.3 160 50.0
TWI79G1045 Tripterygium wilfordii HOM05D007350 ORTHO05D009323 1.1e-28 130.6 163 48.5
Hma1.2p1_0032F.1_g019200 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 3.2e-28 129.0 96 68.8
Oeu025102.1 Olea europaea HOM05D007350 ORTHO05D009323 5.5e-28 128.3 167 50.3
Manes.04G071000 Manihot esculenta HOM05D007350 ORTHO05D009323 2.7e-27 125.9 164 47.0
Sed0025246 Sechium edule HOM05D007350 ORTHO05D009323 2.7e-27 125.9 166 51.2
QL11p052353 Quercus lobata HOM05D007350 ORTHO05D009323 3.6e-27 125.6 165 44.2
Ciclev10029452m.g Citrus clementina HOM05D007350 ORTHO05D009323 7.9e-27 124.4 163 46.0
Potri.004G177800 Populus trichocarpa HOM05D007350 ORTHO05D009323 1.3e-26 123.6 159 47.8
ClCG02G003950 Citrullus lanatus HOM05D007350 ORTHO05D009323 5.1e-26 121.7 166 47.6
MELO3C013337.2 Cucumis melo HOM05D007350 ORTHO05D009323 6.7e-26 121.3 95 66.3
Lalb_Chr02g0159761 Lupinus albus HOM05D007350 ORTHO05D009323 8.8e-26 120.9 163 46.6
Cpa.g.sc20.115 Carica papaya HOM05D007350 ORTHO05D009323 1.1e-25 120.6 161 46.6
Cc09_g10330 Coffea canephora HOM05D007350 ORTHO05D009323 1.1e-25 120.6 159 44.7
CiPaw.05G085400 Carya illinoinensis HOM05D007350 ORTHO05D009323 1.9e-25 119.8 165 42.4
Actinidia20526 Actinidia chinensis HOM05D007350 ORTHO05D009323 2.5e-25 119.4 157 47.1
Actinidia18040 Actinidia chinensis HOM05D007350 ORTHO05D009323 3.3e-25 119.0 158 46.2
Sp7g37290 Schrenkiella parvula HOM05D007350 ORTHO05D009323 4.3e-25 118.6 161 43.5
GSVIVG01023973001 Vitis vinifera HOM05D007350 ORTHO05D009323 5.7e-25 118.2 161 47.8
MSTRG.20506 Avicennia marina HOM05D007350 ORTHO05D009323 7.4e-25 117.9 167 46.7
THA.LOC104807801 Tarenaya hassleriana HOM05D007350 ORTHO05D009323 7.4e-25 117.9 156 44.9
Thhalv10026464m.g Eutrema salsugineum HOM05D007350 ORTHO05D009323 9.7e-25 117.5 167 42.5
Sabra04G0119700 Salix brachista HOM05D007350 ORTHO05D009323 9.7e-25 117.5 159 45.3
PGR042G2321 Punica granatum HOM05D007350 ORTHO05D009323 1.3e-24 117.1 158 47.5
CsaV3_7G001160 Cucumis sativus L. HOM05D007350 ORTHO05D009323 2.2e-24 116.3 93 62.4
Sc08g0002720 Simmondsia chinensis HOM05D007350 ORTHO05D009323 2.2e-24 116.3 131 51.9
arahy.Tifrunner.gnm1.ann1.7M0RFB Arachis hypogaea HOM05D007350 ORTHO05D009323 8.2e-24 114.4 90 63.3
Rhsim03G0180300 Rhododendron simsii HOM05D007350 ORTHO05D009323 1.1e-23 114.0 158 43.7
MD10G1127900 Malus domestica HOM05D007350 ORTHO05D009323 1.4e-23 113.6 96 62.5
Atru.chr5.3441 Acer truncatum HOM05D007350 ORTHO05D009323 5.3e-23 111.7 145 48.3
Ca_04216_v3 Cicer arietinum L. HOM05D007350 ORTHO05D009323 9.1e-23 110.9 116 49.1
Glyma.13G070400 Glycine max HOM05D007350 ORTHO05D009323 9.1e-23 110.9 160 41.2
CANSAT78G0569 Cannabis sativa HOM05D007350 ORTHO05D009323 1.2e-22 110.5 127 51.2
ATR0598G093 Amborella trichopoda HOM05D007350 ORTHO05D009323 1.5e-22 110.2 81 67.9
FAN27G1653 Fragaria x ananassa HOM05D007350 ORTHO05D009323 2.0e-22 109.8 160 46.2
Lj2g0024385 Lotus japonicus HOM05D007350 ORTHO05D009323 2.0e-22 109.8 159 43.4
CDE05G3477 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 3.4e-22 109.0 83 67.5
Hund16245 Selenicereus undatus HOM05D007350 ORTHO05D009323 3.4e-22 109.0 102 57.8
VMungo0464G1538 Vigna mungo HOM05D007350 ORTHO05D009323 3.4e-22 109.0 86 61.6
Nitab4.5_0005221g0020 Nicotiana tabacum HOM05D007350 ORTHO05D009323 4.5e-22 108.6 143 47.6
Medtr6g007793 Medicago truncatula HOM05D007350 ORTHO05D009323 7.7e-22 107.8 162 44.4
AL7G10350 Arabidopsis lyrata HOM05D007350 ORTHO05D009323 1.3e-21 107.1 160 41.2
Glyma.19G012500 Glycine max HOM05D007350 ORTHO05D009323 1.3e-21 107.1 160 40.6
Psat1g060320 Pisum sativum HOM05D007350 ORTHO05D009323 1.3e-21 107.1 99 57.6
Eucgr.G01372 Eucalyptus grandis HOM05D007350 ORTHO05D009323 1.7e-21 106.7 101 52.5
RcHm_v2.0_Chr6g0278921 Rosa chinensis HOM05D007350 ORTHO05D009323 1.7e-21 106.7 112 53.6
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 2.2e-21 106.3 100 53.0
Phvul.004G019500 Phaseolus vulgaris HOM05D007350 ORTHO05D009323 2.9e-21 105.9 86 62.8
CARHR294210 Cardamine hirsuta HOM05D007350 ORTHO05D009323 5.0e-21 105.1 157 42.0
AUR62013001 Chenopodium quinoa HOM05D007350 ORTHO05D009323 5.0e-21 105.1 85 63.5
TPR.G2262 Trifolium pratense HOM05D007350 ORTHO05D009323 5.0e-21 105.1 86 60.5
AUR62010011 Chenopodium quinoa HOM05D007350 ORTHO05D009323 8.5e-21 104.4 85 64.7
FAN24G2045 Fragaria x ananassa HOM05D007350 ORTHO05D009323 8.5e-21 104.4 102 56.9
FAN15G0854 Fragaria x ananassa HOM05D007350 ORTHO05D009323 1.1e-20 104.0 149 46.3
unitig_749.g14334 Utricularia gibba HOM05D000730 ORTHO05D000578 1.1e-20 104.0 122 49.2
FvH4_2g15660 Fragaria vesca HOM05D007350 ORTHO05D009323 1.4e-20 103.6 102 56.9
RcHm_v2.0_Chr6g0278901 Rosa chinensis HOM05D007350 ORTHO05D009323 1.4e-20 103.6 93 60.2
AT4G38490 Arabidopsis thaliana HOM05D007350 ORTHO05D009323 1.9e-20 103.2 166 39.2
CAN.G112.14 Capsicum annuum HOM05D007350 ORTHO05D009323 7.2e-20 101.3 127 44.9
Nitab4.5_0002598g0070 Nicotiana tabacum HOM05D007350 ORTHO05D009323 7.2e-20 101.3 160 39.4
BcaC01g00233 Brassica carinata HOM05D007350 ORTHO05D009323 1.2e-19 100.5 153 39.9
Carub.0007s0037 Capsella rubella HOM05D007350 ORTHO05D009323 1.2e-19 100.5 77 61.0
Solyc05g050720.4 Solanum lycopersicum HOM05D007350 ORTHO05D009323 4.7e-19 98.6 131 45.0
Sopen05g029130 Solanum pennellii HOM05D007350 ORTHO05D009323 4.7e-19 98.6 131 45.0
Lsat_1_v5_gn_4_72021 Lactuca sativa HOM05D007350 ORTHO05D009323 7.9e-19 97.8 98 57.1
Os09g0450200 Oryza sativa ssp. japonica HOM05D007350 ORTHO05D009323 1.4e-18 97.1 131 40.5
A08p24200 Brassica napus HOM05D007350 ORTHO05D009323 3.9e-18 95.5 153 39.9
CDE11G0403 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 3.9e-18 95.5 119 50.4
SGA_v2.0_scaffold124G33608 Striga asiatica HOM05D007350 ORTHO05D009323 5.1e-18 95.1 91 59.3
Dinv09314 Davidia involucrata HOM05D007350 ORTHO05D009323 2.0e-17 93.2 133 39.8
Hma1.2p1_0032F.1_g019210 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 2.6e-17 92.8 62 79.0
HanXRQChr10g0298081 Helianthus annuus HOM05D007350 ORTHO05D009323 2.8e-16 89.4 79 62.0
BraA08t34374Z Brassica rapa HOM05D007350 ORTHO05D009323 6.3e-16 88.2 75 58.7
BolC3t19964H Brassica oleracea HOM05D007350 ORTHO05D009323 8.2e-16 87.8 75 57.3
BcaC01g00225 Brassica carinata HOM05D007350 ORTHO05D009323 1.8e-15 86.7 73 57.5
C03p77120 Brassica napus HOM05D007350 ORTHO05D009323 2.4e-15 86.3 75 56.0
CSS0005535 Camellia sinensis var. sinensis HOM05D007350 ORTHO05D009323 6.9e-15 84.7 130 36.9
ECA234G1892 Erigeron canadensis HOM05D007350 ORTHO05D009323 9.1e-15 84.3 85 52.9
Atru.chr6.83 Acer truncatum HOM05D007350 ORTHO05D009323 3.8e-13 79.0 78 53.8
SalBow5G3345 Salvia bowleyana HOM05D007350 ORTHO05D009323 7.2e-12 74.7 134 36.6
MD10G1128000 Malus domestica HOM05D007350 ORTHO05D009323 9.4e-12 74.3 64 65.6
Pp3c6_16710 Physcomitrium patens HOM05D007350 ORTHO05D009323 8.0e-11 71.2 80 46.2
PGSC0003DMG400006999 Solanum tuberosum HOM05D007350 ORTHO05D009323 6.7e-10 68.2 99 35.4
Mapoly0060s0112 Marchantia polymorpha HOM05D007350 ORTHO05D009323 1.5e-09 67.0 74 48.6
RcHm_v2.0_Chr6g0278961 Rosa chinensis HOM05D007350 ORTHO05D009323 2.6e-09 66.2 87 40.2
HPP92_012658 Vanilla planifolia HOM05D007350 ORTHO05D009323 1.7e-08 63.5 64 46.9
DCAR_004401 Daucus carota HOM05D000250 ORTHO05D000625 2.8e-08 62.8 58 48.3
AagrBONN_evm.TU.Sc2ySwM_369.552 Anthoceros agrestis HOM05D015171 ORTHO05D018321 8.2e-08 61.2 74 44.6
SEGI_00987 Sequoiadendron giganteum HOM05D007350 ORTHO05D009323 9.1e-07 57.8 88 39.8


User provided reference genes

Program Settings