Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G4786 Papaver somniferum HOM05D008543 ORTHO05D000630 3.6e-227 791.2 388 100.0
GSVIVG01014844001 Vitis vinifera HOM05D000174 ORTHO05D000630 3.9e-19 100.1 359 26.7
MBI14_g12738_MAGBIO Magnolia biondii HOM05D000174 ORTHO05D000630 4.7e-17 93.2 330 30.0
HanXRQChr13g0409261 Helianthus annuus HOM05D000174 ORTHO05D000630 8.9e-16 89.0 285 30.2
TAR627G0908 Trochodendron aralioides HOM05D000174 ORTHO05D000630 8.9e-16 89.0 326 27.9
Dinv40916 Davidia involucrata HOM05D008543 ORTHO05D000630 9.8e-15 85.5 413 26.9
HanXRQChr03g0079361 Helianthus annuus HOM05D000174 ORTHO05D000630 8.3e-14 82.4 330 25.5
Nitab4.5_0009408g0010 Nicotiana tabacum HOM05D008543 ORTHO05D000630 1.1e-13 82.0 98 46.9
Oeu006263.1 Olea europaea HOM05D008543 ORTHO05D000630 1.1e-13 82.0 407 25.3
Rhsim06G0235100 Rhododendron simsii HOM05D000174 ORTHO05D000630 1.9e-13 81.3 331 26.6
Aqoxy4G02266 Aquilegia oxysepala HOM05D000174 ORTHO05D000630 9.2e-13 79.0 323 26.3
CSS0016853 Camellia sinensis var. sinensis HOM05D000174 ORTHO05D000630 4.6e-12 76.6 395 25.1
TAR636G0894 Trochodendron aralioides HOM05D008543 ORTHO05D000630 7.8e-12 75.9 345 22.3
THA.LOC104817725 Tarenaya hassleriana HOM05D000174 ORTHO05D000630 6.6e-11 72.8 294 27.2
Actinidia10593 Actinidia chinensis HOM05D000174 ORTHO05D000630 8.6e-11 72.4 390 24.6
PSO782G4637 Papaver somniferum HOM05D015645 ORTHO05D000630 4.3e-10 70.1 329 28.3
Sabra16G0133300 Salix brachista HOM05D008543 ORTHO05D000630 4.3e-10 70.1 388 25.8
Cc05_g15710 Coffea canephora HOM05D000174 ORTHO05D000630 5.6e-10 69.7 344 26.5
Nitab4.5_0000152g0060 Nicotiana tabacum HOM05D008543 ORTHO05D000630 7.3e-10 69.3 144 34.7
Actinidia30352 Actinidia chinensis HOM05D008543 ORTHO05D000630 9.5e-10 68.9 362 23.8
MBI15_g44395_MAGBIO Magnolia biondii HOM05D000174 ORTHO05D000630 9.5e-10 68.9 370 24.1
Peaxi162Scf00106g00091 Petunia axillaris HOM05D001658 ORTHO05D001406 9.5e-10 68.9 357 25.8
Rhsim05G0047500 Rhododendron simsii HOM05D000174 ORTHO05D001526 9.5e-10 68.9 275 25.1
RhsimUnG0141900 Rhododendron simsii HOM05D000174 ORTHO05D001526 9.5e-10 68.9 275 25.1
CiPaw.12G142600 Carya illinoinensis HOM05D000174 ORTHO05D000630 1.2e-09 68.6 326 25.2
Cfa016961 Carpinus fangiana HOM05D000174 ORTHO05D000630 1.6e-09 68.2 399 23.6
Lj8C183G11 Lonicera japonica HOM05D000174 ORTHO05D000630 1.6e-09 68.2 365 26.0
Nn1g07630 Nelumbo nucifera HOM05D000174 ORTHO05D000630 1.6e-09 68.2 335 23.6
PGSC0003DMG400022147 Solanum tuberosum HOM05D008543 ORTHO05D000630 1.6e-09 68.2 158 31.0
Lalb_Chr13g0302941 Lupinus albus HOM05D001658 ORTHO05D001406 2.1e-09 67.8 306 26.8
MD11G1046000 Malus domestica HOM05D000174 ORTHO05D000630 2.8e-09 67.4 364 22.5
Nn1g07631 Nelumbo nucifera HOM05D000174 ORTHO05D000630 2.8e-09 67.4 381 24.7
Cpa.g.sc12.67 Carica papaya HOM05D000174 ORTHO05D000630 4.7e-09 66.6 349 23.2
CSS0041839 Camellia sinensis var. sinensis HOM05D008543 ORTHO05D000630 8.1e-09 65.9 347 23.3
QL08p000516 Quercus lobata HOM05D000174 ORTHO05D000630 1.1e-08 65.5 323 24.8
MD03G1043000 Malus domestica HOM05D000174 ORTHO05D000630 3.1e-08 63.9 373 25.2
unitig_8.g3187 Utricularia gibba HOM05D001658 ORTHO05D001406 3.1e-08 63.9 306 23.9
Oeu052885.1 Olea europaea HOM05D008543 ORTHO05D000630 4.0e-08 63.5 189 30.7
SGA_v2.0_scaffold7G03548 Striga asiatica HOM05D008543 ORTHO05D000630 5.2e-08 63.2 141 35.5
AL1G39140 Arabidopsis lyrata HOM05D001658 ORTHO05D001406 6.8e-08 62.8 297 22.9
THA.LOC104811702 Tarenaya hassleriana HOM05D000174 ORTHO05D000630 6.8e-08 62.8 326 24.5
arahy.Tifrunner.gnm1.ann1.YM25EH Arachis hypogaea HOM05D001658 ORTHO05D001406 8.9e-08 62.4 382 22.3
PGR119G0147 Punica granatum HOM05D000174 ORTHO05D000630 8.9e-08 62.4 390 23.6
RcHm_v2.0_Chr5g0074621 Rosa chinensis HOM05D000174 ORTHO05D000630 2.0e-07 61.2 402 23.1
Sc16g0010820 Simmondsia chinensis HOM05D008543 ORTHO05D000630 2.6e-07 60.8 336 25.6
HPP92_018602 Vanilla planifolia HOM05D001658 ORTHO05D001406 2.6e-07 60.8 294 25.2
Pp3c19_21390 Physcomitrium patens HOM05D000174 ORTHO05D001526 3.4e-07 60.5 290 23.1
CAN.G623.74 Capsicum annuum HOM05D008543 ORTHO05D000630 4.4e-07 60.1 100 34.0
HanXRQChr04g0101431 Helianthus annuus HOM05D001658 ORTHO05D001406 4.4e-07 60.1 342 23.4
Prupe.6G035400 Prunus persica HOM05D000174 ORTHO05D000630 5.8e-07 59.7 412 22.3
Lsat_1_v5_gn_9_88600 Lactuca sativa HOM05D000174 ORTHO05D000630 7.5e-07 59.3 326 25.2
SalBow7G3447 Salvia bowleyana HOM05D000174 ORTHO05D001406 7.5e-07 59.3 287 24.7
arahy.Tifrunner.gnm1.ann1.WCFZ4Q Arachis hypogaea HOM05D001658 ORTHO05D001406 9.8e-07 58.9 389 22.1
CARHR269600 Cardamine hirsuta HOM05D000174 ORTHO05D000630 1.7e-06 58.2 347 23.6
SEGI_09770 Sequoiadendron giganteum HOM05D000174 ORTHO05D037574 1.7e-06 58.2 407 21.9
SEGI_36820 Sequoiadendron giganteum HOM05D000174 ORTHO05D037574 1.7e-06 58.2 407 21.9
HPP92_020442 Vanilla planifolia HOM05D001658 ORTHO05D001406 1.7e-06 58.2 312 26.0
Duzib170G0186 Durio zibethinus HOM05D008543 ORTHO05D000630 2.2e-06 57.8 163 30.1
Migut.M01582 Erythranthe guttata HOM05D008543 ORTHO05D000630 2.2e-06 57.8 71 42.3
Pp3c22_2200 Physcomitrium patens HOM05D000174 ORTHO05D001526 2.2e-06 57.8 296 23.6
Solyc03g115450.1 Solanum lycopersicum HOM05D001658 ORTHO05D001406 2.9e-06 57.4 363 22.9
AT2G17180 Arabidopsis thaliana HOM05D000174 ORTHO05D001526 3.7e-06 57.0 86 38.4
Duzib168G2176 Durio zibethinus HOM05D008543 ORTHO05D000630 3.7e-06 57.0 129 32.6
Nitab4.5_0003570g0030 Nicotiana tabacum HOM05D008543 ORTHO05D000630 3.7e-06 57.0 152 28.3
BcaB03g11999 Brassica carinata HOM05D001658 ORTHO05D001406 4.9e-06 56.6 315 26.7
DCAR_017611 Daucus carota HOM05D000174 ORTHO05D000630 4.9e-06 56.6 154 27.9
unitig_699.g19504 Utricularia gibba HOM05D001658 ORTHO05D001406 4.9e-06 56.6 313 23.0
Oeu051846.1 Olea europaea HOM05D001927 ORTHO05D001972 6.4e-06 56.2 274 25.2
vmacro17301 Vaccinium macrocarpon HOM05D000174 ORTHO05D001526 6.4e-06 56.2 282 24.1
Haze_09916 Corylus avellana HOM05D000174 ORTHO05D000630 8.3e-06 55.8 408 22.1
Glyma.16G102000 Glycine max HOM05D008543 ORTHO05D000630 8.3e-06 55.8 337 23.1
Oeu015527.1 Olea europaea HOM05D000174 ORTHO05D001526 8.3e-06 55.8 275 25.8
Oeu015529.1 Olea europaea HOM05D000174 ORTHO05D001526 8.3e-06 55.8 275 25.8
Potri.001G224600 Populus trichocarpa HOM05D008543 ORTHO05D000630 8.3e-06 55.8 399 23.8


User provided reference genes

Program Settings