Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G4695 Papaver somniferum HOM05D005155 ORTHO05D006266 3.5e-167 591.7 318 100.0
PSO210G0096 Papaver somniferum HOM05D005155 ORTHO05D006266 1.6e-151 539.7 323 90.7
PSO782G5585 Papaver somniferum HOM05D005155 ORTHO05D006266 7.1e-96 354.8 294 70.4
CSS0035525 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 5.1e-70 268.9 312 54.2
Dinv21322 Davidia involucrata HOM05D005155 ORTHO05D006266 4.3e-69 265.8 325 51.4
Potri.014G170500 Populus trichocarpa HOM05D005155 ORTHO05D006266 2.4e-67 260.0 322 48.8
Actinidia24711 Actinidia chinensis HOM05D005155 ORTHO05D006266 3.1e-67 259.6 276 55.1
Rhsim04G0007200 Rhododendron simsii HOM05D005155 ORTHO05D006266 4.1e-67 259.2 326 50.3
Glyma.19G235800 Glycine max HOM05D005155 ORTHO05D006266 6.9e-67 258.5 296 52.7
Actinidia20603 Actinidia chinensis HOM05D005155 ORTHO05D006266 9.1e-67 258.1 309 53.1
Glyma.03G238300 Glycine max HOM05D005155 ORTHO05D006266 2.2e-65 253.4 297 51.9
Hma1.2p1_0629F.1_g192150 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 8.5e-65 251.5 330 50.3
Phvul.006G092400 Phaseolus vulgaris HOM05D005155 ORTHO05D006266 8.5e-65 251.5 328 48.8
Actinidia20617 Actinidia chinensis HOM05D005155 ORTHO05D006266 1.1e-64 251.1 289 54.0
Nitab4.5_0004941g0060 Nicotiana tabacum HOM05D005155 ORTHO05D006266 1.9e-64 250.4 318 50.6
Prupe.3G194600 Prunus persica HOM05D005155 ORTHO05D006266 2.5e-64 250.0 332 49.7
Sed0007088 Sechium edule HOM05D005155 ORTHO05D006266 4.2e-64 249.2 312 50.6
MELO3C024180.2 Cucumis melo HOM05D005155 ORTHO05D006266 5.5e-64 248.8 312 50.0
Ciclev10015959m.g Citrus clementina HOM05D005155 ORTHO05D006266 9.4e-64 248.1 328 49.7
CsaV3_7G002370 Cucumis sativus L. HOM05D005155 ORTHO05D006266 1.2e-63 247.7 312 50.0
PSO782G0752 Papaver somniferum HOM05D005155 ORTHO05D006266 3.6e-63 246.1 242 64.9
Ah.08g210400 Amaranthus hybridus HOM05D005155 ORTHO05D006266 4.7e-63 245.7 271 53.9
Manes.13G059900 Manihot esculenta HOM05D005155 ORTHO05D006266 4.7e-63 245.7 323 48.9
GSVIVG01030126001 Vitis vinifera HOM05D005155 ORTHO05D006266 4.7e-63 245.7 276 54.0
Gorai.001G190100 Gossypium raimondii HOM05D005155 ORTHO05D006266 7.9e-63 245.0 308 50.3
Gohir.D07G170200 Gossypium hirsutum HOM05D005155 ORTHO05D006266 1.8e-62 243.8 308 49.7
Aqoxy3G04181 Aquilegia oxysepala HOM05D005155 ORTHO05D006266 5.1e-62 242.3 325 49.5
PGR044G0745 Punica granatum HOM05D005155 ORTHO05D006266 5.1e-62 242.3 311 47.3
CSS0023894 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 6.7e-62 241.9 325 50.5
Cpa.g.sc136.55 Carica papaya HOM05D005155 ORTHO05D006266 6.7e-62 241.9 315 49.5
ClCG02G003040 Citrullus lanatus HOM05D005155 ORTHO05D006266 8.8e-62 241.5 313 48.9
TAR629G2368 Trochodendron aralioides HOM05D005155 ORTHO05D006266 8.8e-62 241.5 328 48.2
Nitab4.5_0003086g0050 Nicotiana tabacum HOM05D005155 ORTHO05D006266 1.1e-61 241.1 320 49.1
Haze_24928 Corylus avellana HOM05D005155 ORTHO05D006266 1.5e-61 240.7 333 47.7
Dinv05324 Davidia involucrata HOM05D005155 ORTHO05D006266 1.5e-61 240.7 310 50.6
Gohir.A07G163100 Gossypium hirsutum HOM05D005155 ORTHO05D006266 2.6e-61 240.0 306 49.0
Atru.chr6.3431 Acer truncatum HOM05D005155 ORTHO05D006266 1.3e-60 237.7 308 49.7
Lj4g0024217 Lotus japonicus HOM05D005155 ORTHO05D006266 1.7e-60 237.3 337 45.7
DCAR_021083 Daucus carota HOM05D005155 ORTHO05D006266 2.2e-60 236.9 324 49.1
Gohir.D11G154600 Gossypium hirsutum HOM05D005155 ORTHO05D006266 2.2e-60 236.9 325 46.8
MBI04_g26115_MAGBIO Magnolia biondii HOM05D005155 ORTHO05D006266 2.2e-60 236.9 339 45.7
Sc20g0004590 Simmondsia chinensis HOM05D005155 ORTHO05D006266 2.2e-60 236.9 322 47.5
TWI75G0909 Tripterygium wilfordii HOM05D005155 ORTHO05D006266 2.2e-60 236.9 314 46.8
Gorai.007G164700 Gossypium raimondii HOM05D005155 ORTHO05D006266 1.8e-59 233.8 325 46.5
VMungo0540G1824 Vigna mungo HOM05D005155 ORTHO05D006266 5.3e-59 232.3 300 49.0
Duzib211G0098 Durio zibethinus HOM05D005155 ORTHO05D006266 7.0e-59 231.9 311 46.3
THA.LOC104802634 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 9.1e-59 231.5 290 49.3
TPR.G3861 Trifolium pratense HOM05D005155 ORTHO05D006266 2.0e-58 230.3 329 45.3
CiPaw.04G197900 Carya illinoinensis HOM05D005155 ORTHO05D006266 4.5e-58 229.2 329 45.9
Thecc.01G199500 Theobroma cacao HOM05D005155 ORTHO05D006266 4.5e-58 229.2 322 46.9
Lalb_Chr21g0315451 Lupinus albus HOM05D005155 ORTHO05D006266 5.9e-58 228.8 328 47.0
Carub.0008s0781 Capsella rubella HOM05D005155 ORTHO05D006266 7.7e-58 228.4 305 47.9
PGSC0003DMG400004112 Solanum tuberosum HOM05D005155 ORTHO05D006266 1.0e-57 228.0 347 44.7
Oeu022053.1 Olea europaea HOM05D005155 ORTHO05D006266 3.8e-57 226.1 310 47.1
Sopen05g001730 Solanum pennellii HOM05D005155 ORTHO05D006266 5.0e-57 225.7 327 46.8
Eucgr.K01388 Eucalyptus grandis HOM05D005155 ORTHO05D006266 1.1e-56 224.6 326 45.7
Ah.08g219720 Amaranthus hybridus HOM05D005155 ORTHO05D006266 1.4e-56 224.2 268 50.4
Solyc05g005730.4 Solanum lycopersicum HOM05D005155 ORTHO05D006266 4.2e-56 222.6 335 45.4
Psat7g043480 Pisum sativum HOM05D005155 ORTHO05D006266 1.6e-55 220.7 317 44.8
Cfa014201 Carpinus fangiana HOM05D005155 ORTHO05D006266 2.1e-55 220.3 338 44.7
AL8G20970 Arabidopsis lyrata HOM05D005155 ORTHO05D006266 4.7e-55 219.2 307 45.3
Duzib138G0133 Durio zibethinus HOM05D005155 ORTHO05D006266 1.0e-54 218.0 286 48.3
CANSAT64G2107 Cannabis sativa HOM05D005155 ORTHO05D006266 2.3e-54 216.9 327 46.2
A09p04360 Brassica napus HOM05D005155 ORTHO05D006266 3.9e-54 216.1 307 46.9
HPP92_009941 Vanilla planifolia HOM05D005155 ORTHO05D006266 5.2e-54 215.7 320 44.7
THA.LOC104819027 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 8.8e-54 214.9 305 45.6
AT5G48240 Arabidopsis thaliana HOM05D005155 ORTHO05D006266 1.5e-53 214.2 302 46.7
Thhalv10004636m.g Eutrema salsugineum HOM05D005155 ORTHO05D006266 2.6e-53 213.4 306 46.1
Haze_12586 Corylus avellana HOM05D005155 ORTHO05D006266 5.7e-53 212.2 219 58.4
Peaxi162Scf00359g00214 Petunia axillaris HOM05D005155 ORTHO05D006266 2.8e-52 209.9 318 44.7
MD09G1131700 Malus domestica HOM05D005155 ORTHO05D006266 3.7e-52 209.5 326 45.4
TPR.G35685 Trifolium pratense HOM05D005155 ORTHO05D006266 4.8e-52 209.1 350 42.6
Nn3g19477 Nelumbo nucifera HOM05D005155 ORTHO05D006266 6.3e-52 208.8 284 46.1
AUR62030994 Chenopodium quinoa HOM05D005155 ORTHO05D006266 8.2e-52 208.4 259 47.5
Sp2g18610 Schrenkiella parvula HOM05D005155 ORTHO05D006266 1.1e-51 208.0 320 42.5
CAN.G1447.4 Capsicum annuum HOM05D005155 ORTHO05D006266 1.4e-51 207.6 331 43.8
C09p04670 Brassica napus HOM05D005155 ORTHO05D006266 1.8e-51 207.2 307 45.3
Aa31LG4G7530 Aethionema arabicum HOM05D005155 ORTHO05D006266 2.4e-51 206.8 322 45.3
Cc02_g33980 Coffea canephora HOM05D005155 ORTHO05D006266 4.1e-51 206.1 281 48.8
unitig_26.g9470 Utricularia gibba HOM05D003767 ORTHO05D004507 7.0e-51 205.3 265 46.8
Migut.M00065 Erythranthe guttata HOM05D005155 ORTHO05D006266 1.2e-50 204.5 337 42.7
COL.COLO4_19654 Corchorus olitorius HOM05D005155 ORTHO05D006266 1.6e-50 204.1 169 65.7
CAN.G715.5 Capsicum annuum HOM05D005155 ORTHO05D006266 7.7e-50 201.8 278 47.5
C07p38970 Brassica napus HOM05D005155 ORTHO05D006266 1.0e-49 201.4 308 43.5
FAN09G4460 Fragaria x ananassa HOM05D005155 ORTHO05D006266 1.0e-49 201.4 325 42.2
FAN02G4414 Fragaria x ananassa HOM05D005155 ORTHO05D006266 1.7e-49 200.7 325 41.2
BraA09t36073Z Brassica rapa HOM05D005155 ORTHO05D006266 5.0e-49 199.1 342 41.8
EL10Ac5g10791 Beta vulgaris HOM05D005155 ORTHO05D006266 1.5e-48 197.6 287 45.3
arahy.Tifrunner.gnm1.ann1.ZBS9GV Arachis hypogaea HOM05D005155 ORTHO05D006266 1.9e-48 197.2 318 42.1
BolC9t53395H Brassica oleracea HOM05D005155 ORTHO05D006266 1.9e-48 197.2 337 41.8
CDE09G0959 Ceratophyllum demersum HOM05D005155 ORTHO05D006266 1.9e-48 197.2 268 44.0
BcaB04g19566 Brassica carinata HOM05D005155 ORTHO05D006266 2.5e-48 196.8 321 42.4
A06p39310 Brassica napus HOM05D005155 ORTHO05D006266 2.5e-48 196.8 224 50.4
HanXRQChr01g0006811 Helianthus annuus HOM05D005155 ORTHO05D006266 3.2e-48 196.4 326 44.8
arahy.Tifrunner.gnm1.ann1.FV1RU3 Arachis hypogaea HOM05D005155 ORTHO05D006266 9.4e-48 194.9 318 41.8
FAN05G3842 Fragaria x ananassa HOM05D005155 ORTHO05D006266 9.4e-48 194.9 325 41.2
Nn1g02050 Nelumbo nucifera HOM05D005155 ORTHO05D006266 9.4e-48 194.9 301 44.5
SGA_v2.0_scaffold181G39700 Striga asiatica HOM05D005155 ORTHO05D006266 1.6e-47 194.1 374 39.0
Lsat_1_v5_gn_0_13881 Lactuca sativa HOM05D005155 ORTHO05D006266 2.1e-47 193.7 276 45.7
CARHR286520 Cardamine hirsuta HOM05D005155 ORTHO05D006266 2.7e-47 193.4 309 44.0
BcaC04g23785 Brassica carinata HOM05D005155 ORTHO05D006266 3.6e-47 193.0 309 43.7
CARHR218550 Cardamine hirsuta HOM05D005155 ORTHO05D006266 3.6e-47 193.0 272 46.3
FvH4_6g40390 Fragaria vesca HOM05D005155 ORTHO05D006266 3.6e-47 193.0 325 40.9
RcHm_v2.0_Chr2g0155591 Rosa chinensis HOM05D005155 ORTHO05D006266 3.6e-47 193.0 324 40.7
Os11g0266000 Oryza sativa ssp. japonica HOM05D005155 ORTHO05D006266 1.3e-44 184.5 201 48.8
BraA06t26845Z Brassica rapa HOM05D005155 ORTHO05D006266 8.3e-44 181.8 263 42.6
Psat5g216800 Pisum sativum HOM05D005155 ORTHO05D006266 1.8e-43 180.6 261 47.5
Zm00001eb298370 Zea mays HOM05D005155 ORTHO05D006266 4.1e-43 179.5 201 51.7
Gohir.A11G147700 Gossypium hirsutum HOM05D005155 ORTHO05D006266 7.0e-43 178.7 301 42.9
MSTRG.6620 Avicennia marina HOM05D005155 ORTHO05D006266 2.7e-42 176.8 208 55.3
Ca_02017_v3 Cicer arietinum L. HOM05D005155 ORTHO05D006266 2.7e-42 176.8 276 44.2
SalBow7G0407 Salvia bowleyana HOM05D005155 ORTHO05D006266 2.2e-41 173.7 326 41.1
BcaC06g30816 Brassica carinata HOM05D005155 ORTHO05D006266 2.5e-40 170.2 308 41.6
FAN14G3535 Fragaria x ananassa HOM05D005155 ORTHO05D006266 4.2e-40 169.5 348 36.8
ECA248G0062 Erigeron canadensis HOM05D005155 ORTHO05D006266 1.2e-39 167.9 361 36.8
ATR0225G032 Amborella trichopoda HOM05D005155 ORTHO05D006266 4.7e-39 166.0 322 37.0
MD17G1119200 Malus domestica HOM05D005155 ORTHO05D006266 6.1e-39 165.6 248 44.8
SEGI_31719 Sequoiadendron giganteum HOM05D005155 ORTHO05D006266 2.3e-38 163.7 209 47.8
BolC7t44418H Brassica oleracea HOM05D005155 ORTHO05D006266 2.4e-35 153.7 199 48.7
Lj1A800T38 Lonicera japonica HOM05D005155 ORTHO05D006266 1.6e-34 151.0 313 40.6
QL04p067008 Quercus lobata HOM05D005155 ORTHO05D006266 1.5e-32 144.4 502 29.1
CiPaw.03G283900 Carya illinoinensis HOM05D005155 ORTHO05D006266 1.0e-30 138.3 333 33.6
Cc00_g18660 Coffea canephora HOM05D005155 ORTHO05D006266 9.8e-29 131.7 123 58.5
Cc00_g14350 Coffea canephora HOM05D005155 ORTHO05D006266 3.7e-28 129.8 113 60.2
Nn1g02049 Nelumbo nucifera HOM05D005155 ORTHO05D006266 1.1e-27 128.3 174 50.0
AUR62008242 Chenopodium quinoa HOM05D005155 ORTHO05D006266 2.9e-25 120.2 209 37.3
Cc07_g20190 Coffea canephora HOM05D005155 ORTHO05D006266 1.5e-24 117.9 108 57.4
AagrBONN_evm.TU.Sc2ySwM_368.2873 Anthoceros agrestis HOM05D005155 ORTHO05D006266 2.3e-22 110.5 200 37.5
QL01p014609 Quercus lobata HOM05D005155 ORTHO05D006266 1.6e-18 97.8 117 47.9
Mapoly0148s0006 Marchantia polymorpha HOM05D005155 ORTHO05D006266 4.6e-18 96.3 212 34.4
Hma1.2p1_1388F.1_g279940 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 1.9e-16 90.9 66 69.7
Pp3c22_320 Physcomitrium patens HOM05D005155 ORTHO05D006266 7.3e-16 89.0 183 36.1
Pp3c22_322 Physcomitrium patens HOM05D005155 ORTHO05D006266 7.3e-16 89.0 183 36.1
Cc07_g20180 Coffea canephora HOM05D005155 ORTHO05D006266 7.5e-13 79.0 104 46.2
CBR_g23113 Chara braunii HOM05D005155 ORTHO05D006266 1.3e-12 78.2 196 30.6
MD17G1119400 Malus domestica HOM05D005155 ORTHO05D006266 1.0e-09 68.6 74 48.6
PRCOL_00000835 Prasinoderma coloniale HOM05D005155 ORTHO05D006266 5.6e-08 62.8 175 35.4
Lj1A800T39 Lonicera japonica HOM05D005155 ORTHO05D006266 7.3e-08 62.4 53 62.3
QL03p064628 Quercus lobata HOM05D005155 ORTHO05D006266 9.5e-08 62.0 319 26.3
Cc00_g29960 Coffea canephora HOM05D005155 ORTHO05D006266 2.1e-07 60.8 88 45.5


User provided reference genes

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