Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G4648 Papaver somniferum HOM05D004696 ORTHO05D005645 9.6e-104 380.2 193 100.0
PSO478G3068 Papaver somniferum HOM05D004696 ORTHO05D005645 6.9e-102 374.0 193 97.9
PSO063G5897 Papaver somniferum HOM05D004696 ORTHO05D005645 4.2e-83 311.6 187 85.6
PSO832G1751 Papaver somniferum HOM05D004696 ORTHO05D005645 1.2e-82 310.1 191 84.3
Actinidia22921 Actinidia chinensis HOM05D004696 ORTHO05D005645 9.1e-62 240.7 193 62.7
TAR629G2307 Trochodendron aralioides HOM05D004696 ORTHO05D005645 6.5e-60 234.6 191 63.4
HanXRQChr09g0238571 Helianthus annuus HOM05D004696 ORTHO05D005645 8.5e-60 234.2 190 63.7
Dinv18020 Davidia involucrata HOM05D004696 ORTHO05D005645 1.1e-59 233.8 190 63.7
Lsat_1_v5_gn_1_39920 Lactuca sativa HOM05D004696 ORTHO05D005645 1.5e-59 233.4 190 62.6
CSS0007787 Camellia sinensis var. sinensis HOM05D004696 ORTHO05D005645 3.2e-59 232.3 194 60.8
Lsat_1_v5_gn_6_92581 Lactuca sativa HOM05D004696 ORTHO05D005645 2.1e-58 229.6 187 62.6
Lalb_Chr17g0338851 Lupinus albus HOM05D004696 ORTHO05D005645 3.6e-58 228.8 192 60.9
EL10Ac4g08571 Beta vulgaris HOM05D004696 ORTHO05D005645 8.0e-58 227.6 190 62.1
Potri.010G002100 Populus trichocarpa HOM05D004696 ORTHO05D005645 8.0e-58 227.6 188 63.3
Dinv29511 Davidia involucrata HOM05D004696 ORTHO05D005645 1.8e-57 226.5 190 61.6
Cfa015727 Carpinus fangiana HOM05D004696 ORTHO05D005645 3.0e-57 225.7 190 62.6
Manes.11G020900 Manihot esculenta HOM05D004696 ORTHO05D005645 3.0e-57 225.7 188 63.3
TWI73G0566 Tripterygium wilfordii HOM05D004696 ORTHO05D005645 5.2e-57 224.9 190 59.5
Solyc05g053220.3 Solanum lycopersicum HOM05D004696 ORTHO05D005645 8.8e-57 224.2 190 62.1
Sopen05g031730 Solanum pennellii HOM05D004696 ORTHO05D005645 8.8e-57 224.2 190 62.1
GSVIVG01017685001 Vitis vinifera HOM05D004696 ORTHO05D005645 8.8e-57 224.2 190 59.5
Potri.008G206400 Populus trichocarpa HOM05D004696 ORTHO05D005645 1.5e-56 223.4 188 62.2
vmacro08011 Vaccinium macrocarpon HOM05D004696 ORTHO05D005645 1.5e-56 223.4 201 58.7
Haze_00771 Corylus avellana HOM05D004696 ORTHO05D005645 2.0e-56 223.0 190 61.6
Eucgr.B03956 Eucalyptus grandis HOM05D004696 ORTHO05D005645 2.0e-56 223.0 194 60.3
PGSC0003DMG400027150 Solanum tuberosum HOM05D004696 ORTHO05D005645 2.0e-56 223.0 190 61.6
PGR031G3538 Punica granatum HOM05D004696 ORTHO05D005645 3.3e-56 222.2 195 57.9
Aqoxy4G02417 Aquilegia oxysepala HOM05D004696 ORTHO05D005645 4.4e-56 221.9 191 61.3
MSTRG.24614 Avicennia marina HOM05D004696 ORTHO05D005645 9.7e-56 220.7 187 59.9
Cpa.g.sc146.25 Carica papaya HOM05D004696 ORTHO05D005645 9.7e-56 220.7 192 59.9
Manes.03G211700 Manihot esculenta HOM05D004696 ORTHO05D005645 9.7e-56 220.7 190 61.6
Sc17g0002920 Simmondsia chinensis HOM05D004696 ORTHO05D005645 9.7e-56 220.7 196 59.7
Thecc.04G312600 Theobroma cacao HOM05D004696 ORTHO05D005645 9.7e-56 220.7 191 59.7
CDE06G2579 Ceratophyllum demersum HOM05D005139 ORTHO05D006125 1.7e-55 219.9 198 57.6
Glyma.01G218300 Glycine max HOM05D004696 ORTHO05D005645 1.7e-55 219.9 190 59.5
CAN.G305.38 Capsicum annuum HOM05D004696 ORTHO05D005645 2.2e-55 219.5 187 61.0
CiPaw.02G069300 Carya illinoinensis HOM05D004696 ORTHO05D005645 2.2e-55 219.5 190 61.1
Lalb_Chr10g0096421 Lupinus albus HOM05D004696 ORTHO05D005645 2.8e-55 219.2 190 58.9
Atru.chr4.3144 Acer truncatum HOM05D004696 ORTHO05D005645 4.8e-55 218.4 187 58.8
Aqoxy5G04183 Aquilegia oxysepala HOM05D004696 ORTHO05D005645 4.8e-55 218.4 191 60.7
Glyma.11G024900 Glycine max HOM05D004696 ORTHO05D005645 4.8e-55 218.4 189 59.3
Ciclev10005920m.g Citrus clementina HOM05D004696 ORTHO05D005645 6.3e-55 218.0 192 58.9
Lj2g0021207 Lotus japonicus HOM05D004696 ORTHO05D005645 6.3e-55 218.0 190 59.5
CsaV3_6G008150 Cucumis sativus L. HOM05D004696 ORTHO05D005645 8.2e-55 217.6 190 60.0
arahy.Tifrunner.gnm1.ann1.NQRV37 Arachis hypogaea HOM05D004696 ORTHO05D005645 1.1e-54 217.2 199 58.3
arahy.Tifrunner.gnm1.ann1.61U0KE Arachis hypogaea HOM05D004696 ORTHO05D005645 1.4e-54 216.9 199 57.8
AUR62020507 Chenopodium quinoa HOM05D004696 ORTHO05D005645 1.8e-54 216.5 188 59.0
MD07G1065600 Malus domestica HOM05D004696 ORTHO05D005645 3.1e-54 215.7 192 59.9
ECA220G0002 Erigeron canadensis HOM05D004696 ORTHO05D005645 5.3e-54 214.9 176 63.1
Migut.N00002 Erythranthe guttata HOM05D004696 ORTHO05D005645 7.0e-54 214.5 189 56.6
MD13G1140700 Malus domestica HOM05D004696 ORTHO05D005645 7.0e-54 214.5 189 59.3
Sabra02G0114900 Salix brachista HOM05D004696 ORTHO05D005645 7.0e-54 214.5 188 60.6
TWI09G0971 Tripterygium wilfordii HOM05D004696 ORTHO05D005645 9.1e-54 214.2 190 57.4
VMungo0331G1167 Vigna mungo HOM05D004696 ORTHO05D005645 1.2e-53 213.8 190 59.5
arahy.Tifrunner.gnm1.ann1.BY2PXQ Arachis hypogaea HOM05D004696 ORTHO05D005645 1.6e-53 213.4 199 57.3
MD16G1136700 Malus domestica HOM05D004696 ORTHO05D005645 1.6e-53 213.4 189 59.3
Prupe.1G105700 Prunus persica HOM05D004696 ORTHO05D005645 2.6e-53 212.6 192 57.3
CANSAT78G0332 Cannabis sativa HOM05D004696 ORTHO05D005645 3.5e-53 212.2 191 58.1
QL06p014174 Quercus lobata HOM05D004696 ORTHO05D005645 4.5e-53 211.8 199 58.3
Ah.16g105210 Amaranthus hybridus HOM05D004696 ORTHO05D005645 7.7e-53 211.1 190 56.8
Phvul.003G045400 Phaseolus vulgaris HOM05D004696 ORTHO05D005645 7.7e-53 211.1 192 58.3
Phvul.010G140500 Phaseolus vulgaris HOM05D004696 ORTHO05D005645 1.0e-52 210.7 190 57.9
RcHm_v2.0_Chr4g0427441 Rosa chinensis HOM05D004696 ORTHO05D005645 1.0e-52 210.7 188 59.0
Gorai.005G071900 Gossypium raimondii HOM05D004696 ORTHO05D005645 1.3e-52 210.3 195 58.5
Sed0019137 Sechium edule HOM05D004696 ORTHO05D005645 1.3e-52 210.3 189 58.2
Ah.06g192450 Amaranthus hybridus HOM05D004696 ORTHO05D005645 2.2e-52 209.5 190 55.8
FAN07G1680 Fragaria x ananassa HOM05D004696 ORTHO05D005645 2.2e-52 209.5 188 58.0
Lj4g0004970 Lotus japonicus HOM05D004696 ORTHO05D005645 2.2e-52 209.5 190 57.4
Duzib151G0078 Durio zibethinus HOM05D004696 ORTHO05D005645 6.5e-52 208.0 191 58.6
FAN12G0616 Fragaria x ananassa HOM05D004696 ORTHO05D005645 6.5e-52 208.0 191 58.6
Gohir.A02G058200 Gossypium hirsutum HOM05D004696 ORTHO05D005645 6.5e-52 208.0 195 57.4
Medtr5g081850 Medicago truncatula HOM05D004696 ORTHO05D005645 6.5e-52 208.0 191 56.5
FvH4_4g21490 Fragaria vesca HOM05D004696 ORTHO05D005645 8.5e-52 207.6 187 58.3
Cc03_g00150 Coffea canephora HOM05D004696 ORTHO05D005645 1.1e-51 207.2 211 52.6
Glyma.14G125600 Glycine max HOM05D004696 ORTHO05D005645 2.5e-51 206.1 182 58.2
Gohir.D02G064000 Gossypium hirsutum HOM05D004696 ORTHO05D005645 4.2e-51 205.3 195 57.4
unitig_8.g2889 Utricularia gibba HOM05D004696 ORTHO05D005645 5.5e-51 204.9 184 56.5
Sabra08G0150400 Salix brachista HOM05D004696 ORTHO05D005645 9.4e-51 204.1 208 54.8
SGA_v2.0_scaffold49G18399 Striga asiatica HOM05D004696 ORTHO05D005645 1.6e-50 203.4 187 58.3
Psat7g133720 Pisum sativum HOM05D004696 ORTHO05D005645 2.7e-50 202.6 191 55.5
Cc00_g15640 Coffea canephora HOM05D004696 ORTHO05D005645 8.0e-50 201.1 209 53.1
AUR62015697 Chenopodium quinoa HOM05D004696 ORTHO05D005645 1.0e-49 200.7 151 66.2
Os02g0730500 Oryza sativa ssp. japonica HOM05D004696 ORTHO05D005645 1.8e-49 199.9 189 54.5
Psat1g042400 Pisum sativum HOM05D004696 ORTHO05D005645 1.8e-49 199.9 191 54.5
MBI03_g01483_MAGBIO Magnolia biondii HOM05D004696 ORTHO05D005645 2.3e-49 199.5 177 56.5
SalBow2G0725 Salvia bowleyana HOM05D001196 ORTHO05D005911 5.2e-49 198.4 194 53.6
Sabra02G0116500 Salix brachista HOM05D004696 ORTHO05D005645 6.8e-49 198.0 208 54.3
Aqoxy3G02973 Aquilegia oxysepala HOM05D004696 ORTHO05D005645 2.6e-48 196.1 157 64.3
TPR.G8061 Trifolium pratense HOM05D004696 ORTHO05D005645 3.4e-48 195.7 195 53.8
BcaB04g19639 Brassica carinata HOM05D004696 ORTHO05D005645 4.4e-48 195.3 183 54.1
THA.LOC104827108 Tarenaya hassleriana HOM05D004696 ORTHO05D005645 9.7e-48 194.1 183 56.3
BcaC04g23715 Brassica carinata HOM05D004696 ORTHO05D005645 3.1e-46 189.1 187 52.9
AL6G41010 Arabidopsis lyrata HOM05D004696 ORTHO05D005645 4.1e-46 188.7 189 52.9
Nitab4.5_0008086g0030 Nicotiana tabacum HOM05D004696 ORTHO05D005645 9.1e-46 187.6 187 54.5
Sp2g19960 Schrenkiella parvula HOM05D004696 ORTHO05D005645 9.1e-46 187.6 191 52.4
Zm00001eb189970 Zea mays HOM05D004696 ORTHO05D005645 1.2e-45 187.2 190 53.7
Oeu022705.1 Olea europaea HOM05D004696 ORTHO05D005645 2.0e-45 186.4 169 59.2
AT5G30495 Arabidopsis thaliana HOM05D004696 ORTHO05D005645 4.5e-45 185.3 189 52.4
AT1G54770 Arabidopsis thaliana HOM05D004696 ORTHO05D005645 5.0e-44 181.8 186 53.2
CARHR185500 Cardamine hirsuta HOM05D004696 ORTHO05D005645 6.5e-44 181.4 189 51.3
A09p05040 Brassica napus HOM05D004696 ORTHO05D005645 8.5e-44 181.0 187 51.9
BraA09t36143Z Brassica rapa HOM05D004696 ORTHO05D005645 1.5e-43 180.3 187 51.9
C09p05450 Brassica napus HOM05D004696 ORTHO05D005645 4.2e-43 178.7 187 51.3
BolC9t53474H Brassica oleracea HOM05D004696 ORTHO05D005645 1.2e-42 177.2 187 50.8
Lj6C700T16 Lonicera japonica HOM05D004696 ORTHO05D005645 1.2e-42 177.2 190 52.1
Carub.0002s0865 Capsella rubella HOM05D004696 ORTHO05D005645 1.6e-42 176.8 181 51.4
ECA248G3148 Erigeron canadensis HOM05D004696 ORTHO05D005645 1.0e-41 174.1 181 53.0
Rhsim04G0248200 Rhododendron simsii HOM05D004696 ORTHO05D005645 1.8e-41 173.3 189 49.7
Mapoly0084s0020 Marchantia polymorpha HOM05D004696 ORTHO05D005645 1.5e-40 170.2 190 50.5
Oeu037627.2 Olea europaea HOM05D004696 ORTHO05D005645 2.0e-40 169.9 289 39.4
arahy.Tifrunner.gnm1.ann1.09FGJA Arachis hypogaea HOM05D004696 ORTHO05D005645 1.3e-39 167.2 193 49.2
Thhalv10005420m.g Eutrema salsugineum HOM05D004696 ORTHO05D005645 2.8e-39 166.0 190 48.9
Aa31LG2G12130 Aethionema arabicum HOM05D004696 ORTHO05D005645 4.9e-39 165.2 189 47.1
Hma1.2p1_2234F.1_g317690 Hydrangea macrophylla HOM05D004696 ORTHO05D000003 8.3e-39 164.5 252 41.7
SGA_v2.0_scaffold69G23291 Striga asiatica HOM05D004696 ORTHO05D005645 3.1e-38 162.5 187 48.7
Actinidia01063 Actinidia chinensis HOM05D004696 ORTHO05D005645 3.5e-37 159.1 193 46.6
Peaxi162Scf00164g00414 Petunia axillaris HOM05D004696 ORTHO05D005645 3.5e-37 159.1 187 49.2
Pp3c7_450 Physcomitrium patens HOM05D004696 ORTHO05D005645 5.9e-37 158.3 171 48.0
SEGI_16783 Sequoiadendron giganteum HOM05D004696 ORTHO05D005645 7.7e-37 157.9 176 52.3
SEGI_41631 Sequoiadendron giganteum HOM05D004696 ORTHO05D005645 7.7e-37 157.9 185 50.8
ClCG06G002080 Citrullus lanatus HOM05D004696 ORTHO05D005645 1.5e-35 153.7 190 46.8
SMO139G0013 Selaginella moellendorffii HOM05D004696 ORTHO05D005645 3.3e-35 152.5 182 48.4
SHI04008 Sapria himalayana HOM05D004696 ORTHO05D005645 8.0e-34 147.9 152 52.0
Nitab4.5_0000745g0120 Nicotiana tabacum HOM05D004696 ORTHO05D005645 1.0e-33 147.5 187 47.6
Nn3g16891 Nelumbo nucifera HOM05D004696 ORTHO05D005645 5.7e-32 141.7 121 58.7
CBR_g41139 Chara braunii HOM05D004696 ORTHO05D005645 2.8e-31 139.4 142 49.3
Ca_05928_v3 Cicer arietinum L. HOM05D004696 ORTHO05D005645 4.9e-31 138.7 192 43.2
Ca_06214_v3 Cicer arietinum L. HOM05D004696 ORTHO05D005645 7.0e-30 134.8 194 40.7
ECA149G0001 Erigeron canadensis HOM05D004696 ORTHO05D005645 1.9e-27 126.7 181 45.9
Lj4g0014561 Lotus japonicus HOM05D004696 ORTHO05D005645 1.9e-27 126.7 105 64.8
Lj4g0016234 Lotus japonicus HOM05D004696 ORTHO05D005645 2.1e-26 123.2 95 67.4
HPP92_006011 Vanilla planifolia HOM05D004696 ORTHO05D005645 3.1e-25 119.4 116 50.0
ATR1127G170 Amborella trichopoda HOM05D004696 ORTHO05D005645 8.9e-25 117.9 120 49.2
MELO3C035238.2 Cucumis melo HOM05D004696 ORTHO05D005645 4.9e-23 112.1 160 40.6
TAR371G0358 Trochodendron aralioides HOM05D004696 ORTHO05D005645 6.4e-23 111.7 101 61.4
AagrBONN_evm.TU.Sc2ySwM_368.1627 Anthoceros agrestis HOM05D004696 ORTHO05D005645 5.4e-22 108.6 138 43.5
Zm00001eb253530 Zea mays HOM05D004696 ORTHO05D005645 5.4e-22 108.6 99 59.6
MCO05G434 Micromonas commoda HOM05D004696 ORTHO05D005645 2.0e-21 106.7 152 40.8
RcHm_v2.0_Chr4g0427481 Rosa chinensis HOM05D004696 ORTHO05D005645 1.1e-19 100.9 94 50.0
PRCOL_00000839 Prasinoderma coloniale HOM05D004696 ORTHO05D005645 3.6e-18 95.9 105 45.7
COL.COLO4_34519 Corchorus olitorius HOM05D004696 ORTHO05D005645 1.1e-17 94.4 117 45.3
CSS0022818 Camellia sinensis var. sinensis HOM05D004696 ORTHO05D005645 1.8e-17 93.6 96 49.0
Cfa024688 Carpinus fangiana HOM05D004696 ORTHO05D005645 4.0e-17 92.4 146 38.4
Lj2g0010517 Lotus japonicus HOM05D004696 ORTHO05D005645 2.0e-16 90.1 133 40.6
CSS0046364 Camellia sinensis var. sinensis HOM05D004696 ORTHO05D005645 2.6e-16 89.7 97 47.4
Lj2g0009432 Lotus japonicus HOM05D004696 ORTHO05D005645 9.8e-16 87.8 69 63.8
BolC9t57816H Brassica oleracea HOM05D004696 ORTHO05D005645 2.2e-15 86.7 114 43.0
BcaC04g19932 Brassica carinata HOM05D004696 ORTHO05D005645 1.1e-14 84.3 114 42.1
Cre03.g194150 Chlamydomonas reinhardtii HOM05D004696 ORTHO05D005645 3.2e-14 82.8 171 35.1
Zm00001eb026470 Zea mays HOM05D004696 ORTHO05D021106 9.5e-11 71.2 65 55.4
BcaB05g22696 Brassica carinata HOM05D004696 ORTHO05D005645 1.2e-10 70.9 106 38.7
QL04p080373 Quercus lobata HOM05D000023 ORTHO05D000014 2.8e-10 69.7 45 68.9
EL10Ac1g01076 Beta vulgaris HOM05D004696 ORTHO05D005645 1.1e-09 67.8 55 60.0
Aqoxy5G04095 Aquilegia oxysepala HOM05D004696 ORTHO05D005645 1.8e-09 67.0 69 56.5
Zm00001eb219180 Zea mays HOM05D004696 ORTHO05D005645 1.5e-08 63.9 65 52.3
QL12p004065 Quercus lobata HOM05D004696 ORTHO05D005645 1.9e-06 57.0 84 46.4


User provided reference genes

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