Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G4622 Papaver somniferum HOM05D010879 ORTHO05D010294 1.5e-247 859.4 542 100.0
PSO384G2643 Papaver somniferum HOM05D010879 ORTHO05D010294 4.1e-67 260.0 186 79.6
PSO528G0157 Papaver somniferum HOM05D010879 ORTHO05D010294 7.9e-63 245.7 269 55.0
PSO017G7209 Papaver somniferum HOM05D010879 ORTHO05D010294 5.7e-61 239.6 171 78.9
PSO063G2271 Papaver somniferum HOM05D010879 ORTHO05D010294 7.4e-61 239.2 182 74.7
PSO210G4529 Papaver somniferum HOM05D010879 ORTHO05D010294 7.4e-61 239.2 169 79.9
PSO223G0075 Papaver somniferum HOM05D010879 ORTHO05D010294 7.4e-61 239.2 169 79.9
PSO339G0939 Papaver somniferum HOM05D010879 ORTHO05D010294 7.4e-61 239.2 169 79.9
PSO339G6517 Papaver somniferum HOM05D010879 ORTHO05D010294 7.4e-61 239.2 169 79.9
PSO423G0281 Papaver somniferum HOM05D010879 ORTHO05D010294 7.4e-61 239.2 169 79.9
PSO675G8923 Papaver somniferum HOM05D010879 ORTHO05D010294 7.4e-61 239.2 169 79.9
PSO724G0648 Papaver somniferum HOM05D010879 ORTHO05D010294 7.4e-61 239.2 169 79.9
PSO761G0148 Papaver somniferum HOM05D010879 ORTHO05D010294 7.4e-61 239.2 169 79.9
PSO832G0405 Papaver somniferum HOM05D010879 ORTHO05D010294 7.4e-61 239.2 169 79.9
PSO832G1619 Papaver somniferum HOM05D010879 ORTHO05D010294 7.4e-61 239.2 169 79.9
PSO781G0306 Papaver somniferum HOM05D010879 ORTHO05D010294 2.2e-60 237.7 543 38.9
PSO210G5528 Papaver somniferum HOM05D010879 ORTHO05D010294 1.4e-59 235.0 269 54.3
PSO675G4514 Papaver somniferum HOM05D010879 ORTHO05D010294 1.4e-59 235.0 530 40.0
PSO675G7919 Papaver somniferum HOM05D010879 ORTHO05D010294 1.0e-49 202.2 476 36.1
HanXRQChr11g0349201 Helianthus annuus HOM05D008452 ORTHO05D010294 4.0e-30 137.1 537 29.6
HanXRQChr17g0547341 Helianthus annuus HOM05D008452 ORTHO05D010294 4.0e-30 137.1 537 29.6
HanXRQChr05g0158771 Helianthus annuus HOM05D008452 ORTHO05D010294 5.2e-30 136.7 537 29.6
HanXRQChr03g0077561 Helianthus annuus HOM05D008452 ORTHO05D010294 8.8e-30 136.0 432 32.6
Lsat_1_v5_gn_1_8180 Lactuca sativa HOM05D008452 ORTHO05D010294 1.2e-29 135.6 439 27.6
Lsat_1_v5_gn_9_89720 Lactuca sativa HOM05D008452 ORTHO05D010294 6.6e-25 119.8 354 28.0
PSO717G0128 Papaver somniferum HOM05D010375 ORTHO05D015177 2.5e-24 117.9 384 27.1
PSO700G0133 Papaver somniferum HOM05D010375 ORTHO05D015177 3.3e-24 117.5 365 26.3
Lsat_1_v5_gn_3_84721 Lactuca sativa HOM05D008452 ORTHO05D010294 7.3e-24 116.3 319 28.8
HanXRQChr09g0253291 Helianthus annuus HOM05D008452 ORTHO05D000233 1.2e-23 115.5 327 28.7
HanXRQChr13g0403311 Helianthus annuus HOM05D008452 ORTHO05D000233 2.1e-23 114.8 336 28.3
HanXRQChr01g0011531 Helianthus annuus HOM05D008452 ORTHO05D010294 3.6e-23 114.0 346 34.1
PSO478G4356 Papaver somniferum HOM05D010375 ORTHO05D015177 8.0e-23 112.8 371 27.2
PSO210G3644 Papaver somniferum HOM05D008452 ORTHO05D010294 2.0e-21 108.2 129 65.1
Hma1.2p1_1437F.1_g283240 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 9.8e-21 105.9 362 29.3
Lsat_1_v5_gn_8_116720 Lactuca sativa HOM05D008452 ORTHO05D010294 3.2e-19 100.9 416 25.7
Lsat_1_v5_gn_5_25601 Lactuca sativa HOM05D008452 ORTHO05D010294 9.2e-19 99.4 312 28.5
Aqoxy6G01916 Aquilegia oxysepala HOM05D000539 ORTHO05D000233 1.7e-17 95.1 362 30.7
PSO063G4994 Papaver somniferum HOM05D010375 ORTHO05D000233 1.7e-17 95.1 121 40.5
Lsat_1_v5_gn_5_147380 Lactuca sativa HOM05D008452 ORTHO05D010294 2.3e-17 94.7 425 24.9
Lsat_1_v5_gn_6_60260 Lactuca sativa HOM05D008452 ORTHO05D010294 2.3e-17 94.7 168 35.7
PSO724G0047 Papaver somniferum HOM05D010375 ORTHO05D000233 6.6e-17 93.2 168 33.3
PSO724G0607 Papaver somniferum HOM05D010375 ORTHO05D000233 6.6e-17 93.2 168 33.3
Hma1.2p1_2026F.1_g311550 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 4.3e-16 90.5 361 27.1
Lsat_1_v5_gn_2_71801 Lactuca sativa HOM05D008452 ORTHO05D010294 7.3e-16 89.7 140 37.9
PSO675G2505 Papaver somniferum HOM05D010375 ORTHO05D000233 9.5e-16 89.4 113 41.6
Lsat_1_v5_gn_1_115440 Lactuca sativa HOM05D008452 ORTHO05D010294 6.8e-14 83.2 120 42.5
Lsat_1_v5_gn_4_171061 Lactuca sativa HOM05D008452 ORTHO05D010294 1.5e-13 82.0 265 30.2
RhsimUnG0218400 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.6e-13 81.3 94 40.4
Rhsim02G0146100 Rhododendron simsii HOM05D000539 ORTHO05D000233 4.4e-13 80.5 329 25.8
GSVIVG01000866001 Vitis vinifera HOM05D000539 ORTHO05D000233 5.8e-13 80.1 144 36.8
PSO170G4450 Papaver somniferum HOM05D010375 ORTHO05D000233 7.5e-13 79.7 108 39.8
PSO349G0027 Papaver somniferum HOM05D010375 ORTHO05D000233 9.8e-13 79.3 129 34.1
Lsat_1_v5_gn_3_124700 Lactuca sativa HOM05D008452 ORTHO05D010294 2.2e-12 78.2 179 30.7
Rhsim01G0127800 Rhododendron simsii HOM05D000539 ORTHO05D000233 2.9e-12 77.8 329 23.4
Rhsim09G0096300 Rhododendron simsii HOM05D000539 ORTHO05D000233 2.9e-12 77.8 329 23.4
Lsat_1_v5_gn_8_10480 Lactuca sativa HOM05D008452 ORTHO05D010294 3.7e-12 77.4 406 25.4
RcHm_v2.0_Chr1g0364031 Rosa chinensis HOM05D000539 ORTHO05D000233 4.9e-12 77.0 370 24.9
PSO675G2209 Papaver somniferum HOM05D010375 ORTHO05D000233 8.3e-12 76.3 119 33.6
RcHm_v2.0_Chr7g0201281 Rosa chinensis HOM05D000539 ORTHO05D000233 8.3e-12 76.3 354 25.7
FvH4_7g02993 Fragaria vesca HOM05D000539 ORTHO05D000233 1.1e-11 75.9 360 24.7
PSO541G5385 Papaver somniferum HOM05D000539 ORTHO05D000233 1.1e-11 75.9 172 32.6
Rhsim10G0157200 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-11 75.9 378 25.7
PSO675G7387 Papaver somniferum HOM05D000539 ORTHO05D000233 1.4e-11 75.5 168 32.7
RcHm_v2.0_Chr2g0145261 Rosa chinensis HOM05D000539 ORTHO05D000233 1.4e-11 75.5 354 24.9
RcHm_v2.0_Chr7g0191841 Rosa chinensis HOM05D000539 ORTHO05D000233 2.4e-11 74.7 402 25.1
CANSAT54G0698 Cannabis sativa HOM05D000539 ORTHO05D000233 3.2e-11 74.3 161 34.2
FvH4_3g18051 Fragaria vesca HOM05D000539 ORTHO05D000592 3.2e-11 74.3 460 23.5
RcHm_v2.0_Chr7g0196691 Rosa chinensis HOM05D000539 ORTHO05D000233 5.4e-11 73.6 402 25.1
RcHm_v2.0_Chr3g0483461 Rosa chinensis HOM05D000539 ORTHO05D000233 9.2e-11 72.8 382 23.6
RcHm_v2.0_Chr4g0401831 Rosa chinensis HOM05D000539 ORTHO05D000233 9.2e-11 72.8 113 35.4
FvH4_4g10052 Fragaria vesca HOM05D000539 ORTHO05D000233 1.6e-10 72.0 361 24.4
RcHm_v2.0_Chr3g0485221 Rosa chinensis HOM05D000539 ORTHO05D000233 1.6e-10 72.0 382 23.6
RcHm_v2.0_Chr4g0417051 Rosa chinensis HOM05D000539 ORTHO05D000233 2.7e-10 71.2 405 24.7
Rhsim01G0018900 Rhododendron simsii HOM05D000539 ORTHO05D000233 3.5e-10 70.9 104 39.4
FvH4_3g19213 Fragaria vesca HOM05D000539 ORTHO05D000233 4.6e-10 70.5 363 24.0
CANSAT01G2601 Cannabis sativa HOM05D000539 ORTHO05D000233 1.3e-09 68.9 171 32.2
CANSAT54G2622 Cannabis sativa HOM05D000539 ORTHO05D000233 1.7e-09 68.6 146 32.9
RcHm_v2.0_Chr5g0071741 Rosa chinensis HOM05D000539 ORTHO05D000233 2.3e-09 68.2 84 39.3
Aqoxy3G01843 Aquilegia oxysepala HOM05D000539 ORTHO05D000233 3.9e-09 67.4 190 30.5
Duzib084G0418 Durio zibethinus HOM05D000539 ORTHO05D000233 3.9e-09 67.4 173 31.2
RcHm_v2.0_Chr7g0235651 Rosa chinensis HOM05D000539 ORTHO05D000233 3.9e-09 67.4 376 22.6
RcHm_v2.0_Chr4g0407991 Rosa chinensis HOM05D000539 ORTHO05D000233 5.0e-09 67.0 371 22.6
vmacro04479 Vaccinium macrocarpon HOM05D000539 ORTHO05D000233 6.6e-09 66.6 191 28.3
FvH4_3g23522 Fragaria vesca HOM05D000539 ORTHO05D000233 8.6e-09 66.2 359 23.7
FAN02G4277 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.5e-08 65.5 366 22.7
CANSAT54G1138 Cannabis sativa HOM05D000539 ORTHO05D000233 1.9e-08 65.1 110 38.2
RcHm_v2.0_Chr1g0340611 Rosa chinensis HOM05D000539 ORTHO05D000233 1.9e-08 65.1 156 30.8
PSO832G0348 Papaver somniferum HOM05D010375 ORTHO05D015177 4.3e-08 63.9 82 36.6
Hma1.2p1_0013F.1_g008410 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 5.6e-08 63.5 162 29.6
Lsat_1_v5_gn_9_54600 Lactuca sativa HOM05D008452 ORTHO05D010294 5.6e-08 63.5 78 39.7
Prupe.3G107500 Prunus persica HOM05D000539 ORTHO05D000233 5.6e-08 63.5 185 28.6
FvH4_6g23351 Fragaria vesca HOM05D000539 ORTHO05D000233 7.3e-08 63.2 362 21.8
FvH4_6g31293 Fragaria vesca HOM05D000539 ORTHO05D000233 7.3e-08 63.2 356 23.9
Lsat_1_v5_gn_9_95401 Lactuca sativa HOM05D008452 ORTHO05D010294 9.5e-08 62.8 107 37.4
FvH4_4g04601 Fragaria vesca HOM05D000539 ORTHO05D000233 1.2e-07 62.4 322 23.6
RcHm_v2.0_Chr2g0108861 Rosa chinensis HOM05D000539 ORTHO05D000233 1.2e-07 62.4 136 30.1
RcHm_v2.0_Chr5g0079551 Rosa chinensis HOM05D000539 ORTHO05D000233 1.2e-07 62.4 162 28.4
FAN04G1988 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.6e-07 62.0 363 23.1
RcHm_v2.0_Chr5g0072071 Rosa chinensis HOM05D000539 ORTHO05D000592 1.6e-07 62.0 336 25.6
RcHm_v2.0_Chr7g0227321 Rosa chinensis HOM05D000539 ORTHO05D000233 1.6e-07 62.0 404 24.3
FAN17G0771 Fragaria x ananassa HOM05D000539 ORTHO05D000233 4.7e-07 60.5 363 23.1
FvH4_4g05701 Fragaria vesca HOM05D000539 ORTHO05D000233 6.2e-07 60.1 359 23.1
FvH4_4g15803 Fragaria vesca HOM05D000539 ORTHO05D000233 6.2e-07 60.1 115 33.9
Lsat_1_v5_gn_9_120341 Lactuca sativa HOM05D000539 ORTHO05D000233 6.2e-07 60.1 167 34.1
FAN19G0390 Fragaria x ananassa HOM05D000539 ORTHO05D000233 8.1e-07 59.7 426 24.4
HanXRQChr04g0119771 Helianthus annuus HOM05D008452 ORTHO05D010294 8.1e-07 59.7 107 33.6
HanXRQChr13g0403321 Helianthus annuus HOM05D008452 ORTHO05D010294 8.1e-07 59.7 107 33.6
Prupe.2G155700 Prunus persica HOM05D000539 ORTHO05D000233 8.1e-07 59.7 152 30.3
FAN17G3107 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.1e-06 59.3 363 21.8
Prupe.7G055100 Prunus persica HOM05D000539 ORTHO05D000233 1.1e-06 59.3 116 33.6
FAN16G0584 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.4e-06 58.9 363 21.8
FAN24G2468 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.4e-06 58.9 363 21.8
RcHm_v2.0_Chr1g0352291 Rosa chinensis HOM05D000539 ORTHO05D000233 1.4e-06 58.9 326 25.5
RcHm_v2.0_Chr1g0329531 Rosa chinensis HOM05D000539 ORTHO05D000233 1.8e-06 58.5 171 26.9
RcHm_v2.0_Chr2g0095181 Rosa chinensis HOM05D000539 ORTHO05D000233 1.8e-06 58.5 324 23.8
FAN05G3022 Fragaria x ananassa HOM05D000539 ORTHO05D000592 2.3e-06 58.2 363 21.8
RcHm_v2.0_Chr1g0316591 Rosa chinensis HOM05D000539 ORTHO05D000592 2.3e-06 58.2 139 33.8
FAN22G1565 Fragaria x ananassa HOM05D000539 ORTHO05D000233 3.1e-06 57.8 370 22.7
RcHm_v2.0_Chr6g0271081 Rosa chinensis HOM05D000539 ORTHO05D000233 3.1e-06 57.8 170 30.0
FAN23G0124 Fragaria x ananassa HOM05D000539 ORTHO05D000592 4.0e-06 57.4 354 21.8
FAN23G2368 Fragaria x ananassa HOM05D000539 ORTHO05D000592 4.0e-06 57.4 354 21.8
PSO349G0233 Papaver somniferum HOM05D010375 ORTHO05D015177 4.0e-06 57.4 58 41.4
PSO541G4711 Papaver somniferum HOM05D010375 ORTHO05D015177 4.0e-06 57.4 58 41.4
PSO724G0748 Papaver somniferum HOM05D010375 ORTHO05D015177 4.0e-06 57.4 58 41.4
PSO724G1336 Papaver somniferum HOM05D010375 ORTHO05D015177 4.0e-06 57.4 58 41.4
RcHm_v2.0_Chr3g0460901 Rosa chinensis HOM05D000539 ORTHO05D000233 4.0e-06 57.4 326 25.8
RcHm_v2.0_Chr7g0240601 Rosa chinensis HOM05D000539 ORTHO05D000592 4.0e-06 57.4 323 29.4
Ciclev10024249m.g Citrus clementina HOM05D000539 ORTHO05D000233 5.2e-06 57.0 127 31.5
PSO170G4584 Papaver somniferum HOM05D000539 ORTHO05D000233 5.2e-06 57.0 180 27.8
RcHm_v2.0_Chr1g0318231 Rosa chinensis HOM05D000539 ORTHO05D000233 5.2e-06 57.0 415 26.5
RcHm_v2.0_Chr2g0160781 Rosa chinensis HOM05D000539 ORTHO05D010294 5.2e-06 57.0 82 37.8
RcHm_v2.0_Chr4g0390571 Rosa chinensis HOM05D000539 ORTHO05D000592 5.2e-06 57.0 318 26.4
RcHm_v2.0_Chr4g0395771 Rosa chinensis HOM05D000539 ORTHO05D000592 5.2e-06 57.0 348 22.7
RcHm_v2.0_Chr3g0495531 Rosa chinensis HOM05D000539 ORTHO05D000592 6.8e-06 56.6 85 35.3
CANSAT35G1647 Cannabis sativa HOM05D000539 ORTHO05D000233 8.9e-06 56.2 161 30.4


User provided reference genes

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