Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G4612 Papaver somniferum HOM05D004191 ORTHO05D004887 2.0e-112 409.1 203 100.0
PSO170G1932 Papaver somniferum HOM05D004191 ORTHO05D004887 5.7e-99 364.4 203 92.1
PSO675G8300 Papaver somniferum HOM05D004191 ORTHO05D004887 1.3e-95 353.2 203 88.7
TAR371G0103 Trochodendron aralioides HOM05D004191 ORTHO05D004887 5.0e-95 351.3 203 87.2
MBI02_g10101_MAGBIO Magnolia biondii HOM05D004191 ORTHO05D004887 1.2e-93 346.7 203 85.2
FAN11G1314 Fragaria x ananassa HOM05D004191 ORTHO05D004887 3.6e-93 345.1 203 84.2
Oeu007633.1 Olea europaea HOM05D004191 ORTHO05D004887 3.6e-93 345.1 203 83.3
Ciclev10009626m.g Citrus clementina HOM05D004191 ORTHO05D004887 4.7e-93 344.7 203 84.7
GSVIVG01002004001 Vitis vinifera HOM05D004191 ORTHO05D004887 8.0e-93 344.0 203 84.2
ATR0609G026 Amborella trichopoda HOM05D004191 ORTHO05D004887 1.4e-92 343.2 203 84.7
Aqoxy4G00334 Aquilegia oxysepala HOM05D004191 ORTHO05D004887 1.4e-92 343.2 203 84.2
FvH4_3g21920 Fragaria vesca HOM05D004191 ORTHO05D004887 2.3e-92 342.4 203 82.8
FAN16G1028 Fragaria x ananassa HOM05D004191 ORTHO05D004887 2.3e-92 342.4 203 82.8
RcHm_v2.0_Chr5g0037731 Rosa chinensis HOM05D004191 ORTHO05D004887 2.3e-92 342.4 203 82.8
TAR626G0300 Trochodendron aralioides HOM05D004191 ORTHO05D004887 4.0e-92 341.7 203 83.7
CiPaw.11G184500 Carya illinoinensis HOM05D004191 ORTHO05D004887 5.2e-92 341.3 203 84.2
FAN21G0017 Fragaria x ananassa HOM05D004191 ORTHO05D004887 5.2e-92 341.3 203 82.3
FAN25G1832 Fragaria x ananassa HOM05D004191 ORTHO05D004887 6.8e-92 340.9 203 82.3
MD03G1210500 Malus domestica HOM05D004191 ORTHO05D004887 6.8e-92 340.9 203 82.3
Peaxi162Scf00082g00016 Petunia axillaris HOM05D004191 ORTHO05D004887 6.8e-92 340.9 203 84.2
Prupe.4G204700 Prunus persica HOM05D004191 ORTHO05D004887 6.8e-92 340.9 203 82.3
QL08p013180 Quercus lobata HOM05D004191 ORTHO05D004887 6.8e-92 340.9 202 84.2
CiPaw.12G126500 Carya illinoinensis HOM05D004191 ORTHO05D004887 8.9e-92 340.5 203 84.7
Dinv40713 Davidia involucrata HOM05D004191 ORTHO05D004887 1.2e-91 340.1 203 84.7
Thecc.05G140700 Theobroma cacao HOM05D004191 ORTHO05D004887 1.2e-91 340.1 203 83.3
Cc05_g13280 Coffea canephora HOM05D004191 ORTHO05D004887 2.0e-91 339.3 203 83.3
Duzib093G1201 Durio zibethinus HOM05D004191 ORTHO05D004887 2.0e-91 339.3 203 83.3
MD11G1225200 Malus domestica HOM05D004191 ORTHO05D004887 2.0e-91 339.3 203 81.8
Solyc10g006490.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 2.0e-91 339.3 203 83.7
ATR0109G002 Amborella trichopoda HOM05D004191 ORTHO05D004887 3.4e-91 338.6 203 84.2
CSS0034391 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 5.7e-91 337.8 203 83.7
Cpa.g.sc97.62 Carica papaya HOM05D004191 ORTHO05D004887 5.7e-91 337.8 203 81.8
ECA236G4841 Erigeron canadensis HOM05D004191 ORTHO05D004887 5.7e-91 337.8 203 82.3
Lalb_Chr19g0134771 Lupinus albus HOM05D004191 ORTHO05D004887 5.7e-91 337.8 203 82.8
Potri.001G418400 Populus trichocarpa HOM05D004191 ORTHO05D004887 5.7e-91 337.8 203 82.8
HPP92_013205 Vanilla planifolia HOM05D001003 ORTHO05D004887 5.7e-91 337.8 202 84.2
CANSAT80G0944 Cannabis sativa HOM05D004191 ORTHO05D004887 7.5e-91 337.4 203 81.8
Nitab4.5_0002838g0150 Nicotiana tabacum HOM05D004191 ORTHO05D004887 7.5e-91 337.4 203 82.8
Sabra16G0284100 Salix brachista HOM05D004191 ORTHO05D004887 7.5e-91 337.4 203 82.3
PGSC0003DMG400005405 Solanum tuberosum HOM05D004191 ORTHO05D004887 7.5e-91 337.4 203 82.3
arahy.Tifrunner.gnm1.ann1.HY89VY Arachis hypogaea HOM05D004191 ORTHO05D004887 9.8e-91 337.0 203 82.3
Lj1A865T18 Lonicera japonica HOM05D004191 ORTHO05D004887 9.8e-91 337.0 203 81.8
Nitab4.5_0005420g0050 Nicotiana tabacum HOM05D004191 ORTHO05D004887 9.8e-91 337.0 203 82.3
arahy.Tifrunner.gnm1.ann1.B9KZG1 Arachis hypogaea HOM05D004191 ORTHO05D004887 1.3e-90 336.7 203 82.3
CSS0028201 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 1.3e-90 336.7 203 84.2
Gohir.A09G118400 Gossypium hirsutum HOM05D004191 ORTHO05D004887 1.3e-90 336.7 203 82.3
Gohir.D09G115300 Gossypium hirsutum HOM05D004191 ORTHO05D004887 1.3e-90 336.7 203 82.3
Gorai.006G132900 Gossypium raimondii HOM05D004191 ORTHO05D004887 1.3e-90 336.7 203 82.3
HanXRQChr02g0054141 Helianthus annuus HOM05D004191 ORTHO05D004887 1.3e-90 336.7 203 82.8
Duzib106G0849 Durio zibethinus HOM05D004191 ORTHO05D004887 1.7e-90 336.3 203 82.3
vmacro16476 Vaccinium macrocarpon HOM05D004191 ORTHO05D004887 2.2e-90 335.9 203 81.8
COL.COLO4_05062 Corchorus olitorius HOM05D004191 ORTHO05D004887 2.9e-90 335.5 203 81.8
Rhsim12G0150700 Rhododendron simsii HOM05D004191 ORTHO05D004887 2.9e-90 335.5 203 81.3
Lj3g0027602 Lotus japonicus HOM05D004191 ORTHO05D004887 4.9e-90 334.7 203 80.8
Oeu032442.1 Olea europaea HOM05D004191 ORTHO05D004887 6.3e-90 334.3 203 81.3
Solyc01g096530.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 1.1e-89 333.6 203 81.8
Manes.03G123300 Manihot esculenta HOM05D004191 ORTHO05D004887 1.4e-89 333.2 203 81.3
Lsat_1_v5_gn_7_108481 Lactuca sativa HOM05D004191 ORTHO05D004887 1.8e-89 332.8 203 81.3
Lalb_Chr03g0030141 Lupinus albus HOM05D004191 ORTHO05D004887 1.8e-89 332.8 203 80.8
THA.LOC104799884 Tarenaya hassleriana HOM05D004191 ORTHO05D004887 1.8e-89 332.8 203 80.8
Carub.0008s1502 Capsella rubella HOM05D004191 ORTHO05D004887 2.4e-89 332.4 203 81.8
CAN.G134.12 Capsicum annuum HOM05D004191 ORTHO05D004887 3.2e-89 332.0 203 80.8
Sed0000628 Sechium edule HOM05D004191 ORTHO05D004887 3.2e-89 332.0 203 80.8
Sopen01g040260 Solanum pennellii HOM05D004191 ORTHO05D004887 3.2e-89 332.0 203 81.8
AL8G30180 Arabidopsis lyrata HOM05D004191 ORTHO05D004887 4.1e-89 331.6 203 81.3
Eucgr.F03430 Eucalyptus grandis HOM05D004191 ORTHO05D004887 4.1e-89 331.6 199 82.4
Actinidia34670 Actinidia chinensis HOM05D004191 ORTHO05D004887 5.4e-89 331.3 203 82.3
Thhalv10019192m.g Eutrema salsugineum HOM05D004191 ORTHO05D004887 5.4e-89 331.3 203 81.3
Phvul.011G139700 Phaseolus vulgaris HOM05D004191 ORTHO05D004887 5.4e-89 331.3 203 81.3
PGR031G0276 Punica granatum HOM05D004191 ORTHO05D004887 5.4e-89 331.3 200 82.0
AT5G54750 Arabidopsis thaliana HOM05D004191 ORTHO05D004887 7.0e-89 330.9 203 81.3
Hund11592 Selenicereus undatus HOM05D004191 ORTHO05D004887 7.0e-89 330.9 203 80.3
Ca_18852_v3 Cicer arietinum L. HOM05D004191 ORTHO05D004887 9.2e-89 330.5 203 80.3
SpUn0117_0020 Schrenkiella parvula HOM05D004191 ORTHO05D004887 9.2e-89 330.5 203 81.3
CARHR268090 Cardamine hirsuta HOM05D004191 ORTHO05D004887 1.2e-88 330.1 203 80.8
VMungo1127G0852 Vigna mungo HOM05D004191 ORTHO05D004887 1.2e-88 330.1 203 80.3
Hma1.2p1_0049F.1_g028640 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 1.6e-88 329.7 201 82.1
SGA_v2.0_scaffold416G51230 Striga asiatica HOM05D004191 ORTHO05D004887 1.6e-88 329.7 203 78.8
BcaB07g31034 Brassica carinata HOM05D004191 ORTHO05D004887 2.0e-88 329.3 203 80.8
A09p20070 Brassica napus HOM05D004191 ORTHO05D004887 2.0e-88 329.3 203 80.8
C09p25460 Brassica napus HOM05D004191 ORTHO05D004887 2.0e-88 329.3 203 80.8
BraA09t37620Z Brassica rapa HOM05D004191 ORTHO05D004887 2.0e-88 329.3 203 80.8
MELO3C018102.2 Cucumis melo HOM05D004191 ORTHO05D004887 2.0e-88 329.3 203 80.8
CsaV3_3G023130 Cucumis sativus L. HOM05D004191 ORTHO05D004887 2.0e-88 329.3 203 80.8
Glyma.06G269400 Glycine max HOM05D004191 ORTHO05D004887 2.7e-88 328.9 203 80.3
Glyma.12G135200 Glycine max HOM05D004191 ORTHO05D004887 2.7e-88 328.9 203 80.3
CAN.G1110.10 Capsicum annuum HOM05D004191 ORTHO05D004887 3.5e-88 328.6 217 78.3
Os03g0402000 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 3.5e-88 328.6 199 81.9
Os07g0642300 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 3.5e-88 328.6 199 81.9
Aa31LG3G10650 Aethionema arabicum HOM05D004191 ORTHO05D004887 4.6e-88 328.2 203 80.3
Ah.02g116780 Amaranthus hybridus HOM05D004191 ORTHO05D004887 4.6e-88 328.2 203 79.8
Zm00001eb067130 Zea mays HOM05D004191 ORTHO05D004887 4.6e-88 328.2 201 80.6
Sp4g10480 Schrenkiella parvula HOM05D004191 ORTHO05D004887 5.9e-88 327.8 203 80.3
Zm00001eb433090 Zea mays HOM05D004191 ORTHO05D004887 5.9e-88 327.8 201 80.1
MSTRG.6892 Avicennia marina HOM05D004191 ORTHO05D004887 7.8e-88 327.4 203 78.8
SalBow7G2717 Salvia bowleyana HOM05D004191 ORTHO05D004887 1.0e-87 327.0 203 78.3
Medtr4g081170 Medicago truncatula HOM05D004191 ORTHO05D004887 1.3e-87 326.6 203 79.8
CDE02G0163 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 1.7e-87 326.2 203 78.8
Sopen10g002440 Solanum pennellii HOM05D004191 ORTHO05D004887 1.7e-87 326.2 222 76.1
TPR.G25893 Trifolium pratense HOM05D004191 ORTHO05D004887 2.3e-87 325.9 203 79.8
TPR.G24299 Trifolium pratense HOM05D004191 ORTHO05D004887 3.9e-87 325.1 202 79.7
EL10Ac5g13057 Beta vulgaris HOM05D004191 ORTHO05D004887 6.6e-87 324.3 203 78.3
Sc22g0000820 Simmondsia chinensis HOM05D004191 ORTHO05D004887 6.6e-87 324.3 203 78.8
Eucgr.F00980 Eucalyptus grandis HOM05D004191 ORTHO05D004887 8.6e-87 323.9 203 78.8
ClCG05G014740 Citrullus lanatus HOM05D004191 ORTHO05D004887 1.1e-86 323.6 242 69.8
TWI39G0061 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 1.5e-86 323.2 203 78.3
Sed0012224 Sechium edule HOM05D004191 ORTHO05D004887 2.5e-86 322.4 203 78.3
Sc15g0001730 Simmondsia chinensis HOM05D004191 ORTHO05D004887 4.3e-86 321.6 203 78.8
TWI38G1569 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 5.6e-86 321.2 210 76.7
Migut.H01854 Erythranthe guttata HOM05D004191 ORTHO05D004887 1.2e-85 320.1 203 76.4
Medtr8g027700 Medicago truncatula HOM05D004191 ORTHO05D004887 1.2e-85 320.1 203 77.8
MSTRG.12958 Avicennia marina HOM05D004191 ORTHO05D004887 3.6e-85 318.5 203 77.3
PGR083G1136 Punica granatum HOM05D004191 ORTHO05D004887 3.6e-85 318.5 209 77.5
BolC9t55449H Brassica oleracea HOM05D004191 ORTHO05D004887 8.0e-85 317.4 222 73.4
SGA_v2.0_scaffold24G10288 Striga asiatica HOM05D004191 ORTHO05D004887 8.0e-85 317.4 203 75.4
Hund24114 Selenicereus undatus HOM05D004191 ORTHO05D004887 1.8e-84 316.2 211 77.3
Migut.M01809 Erythranthe guttata HOM05D004191 ORTHO05D004887 2.3e-84 315.8 197 77.7
arahy.Tifrunner.gnm1.ann1.T6DWBF Arachis hypogaea HOM05D004191 ORTHO05D004887 3.1e-84 315.5 203 76.4
Manes.15G076000 Manihot esculenta HOM05D004191 ORTHO05D004887 9.8e-83 310.5 202 75.2
unitig_0.g2386 Utricularia gibba HOM05D004191 ORTHO05D004887 1.7e-82 309.7 199 77.4
Mapoly0006s0106 Marchantia polymorpha HOM05D004191 ORTHO05D004887 5.4e-81 304.7 201 73.6
Nn1g08677 Nelumbo nucifera HOM05D004191 ORTHO05D004887 1.2e-80 303.5 183 81.4
Lsat_1_v5_gn_5_5821 Lactuca sativa HOM05D004191 ORTHO05D004887 7.8e-80 300.8 189 77.8
SMO165G0074 Selaginella moellendorffii HOM05D004191 ORTHO05D004887 1.0e-79 300.4 203 73.4
Peaxi162Scf01434g00020 Petunia axillaris HOM05D004191 ORTHO05D004887 5.0e-79 298.1 203 75.9
AagrBONN_evm.TU.Sc2ySwM_344.5600 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.6e-77 293.1 203 71.4
AagrBONN_evm.TU.Sc2ySwM_344.5601 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.6e-77 293.1 203 71.4
Eucgr.F00978 Eucalyptus grandis HOM05D004191 ORTHO05D004887 1.6e-77 293.1 185 78.4
AagrBONN_evm.TU.Sc2ySwM_362.1587 Anthoceros agrestis HOM05D004191 ORTHO05D004887 3.1e-76 288.9 203 70.4
CBR_g9060 Chara braunii HOM05D004191 ORTHO05D004887 8.9e-76 287.3 203 70.9
Nitab4.5_0002342g0090 Nicotiana tabacum HOM05D004191 ORTHO05D004887 2.9e-74 282.3 203 72.4
AagrBONN_evm.TU.Sc2ySwM_344.5599 Anthoceros agrestis HOM05D004191 ORTHO05D004887 6.4e-74 281.2 188 72.9
Nitab4.5_0002229g0200 Nicotiana tabacum HOM05D004191 ORTHO05D004887 7.1e-73 277.7 203 71.9
Pp3c6_29730 Physcomitrium patens HOM05D004191 ORTHO05D004887 2.7e-72 275.8 188 71.3
BcaB07g30600 Brassica carinata HOM05D004191 ORTHO05D004887 4.6e-72 275.0 200 71.5
BcaC04g21960 Brassica carinata HOM05D004191 ORTHO05D004887 1.5e-70 270.0 170 78.8
Hma1.2p1_0774F.1_g216345 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 2.5e-70 269.2 174 78.2
Dinv22301 Davidia involucrata HOM05D004191 ORTHO05D004887 9.5e-70 267.3 165 81.8
arahy.Tifrunner.gnm1.ann1.N3PQ25 Arachis hypogaea HOM05D004191 ORTHO05D004887 1.4e-68 263.5 203 66.5
Cpa.g.sc2.173 Carica papaya HOM05D004191 ORTHO05D004887 5.8e-67 258.1 230 58.3
Peaxi162Scf01475g00001 Petunia axillaris HOM05D004191 ORTHO05D004887 7.6e-67 257.7 203 68.5
AUR62007507 Chenopodium quinoa HOM05D004191 ORTHO05D004887 1.9e-65 253.1 159 76.7
AUR62039960 Chenopodium quinoa HOM05D004191 ORTHO05D004887 5.4e-65 251.5 164 75.6
PGSC0003DMG400029125 Solanum tuberosum HOM05D004191 ORTHO05D004887 2.8e-61 239.2 203 63.1
Peaxi162Scf08257g00003 Petunia axillaris HOM05D004191 ORTHO05D004887 3.6e-61 238.8 203 64.0
Cre03.g145607 Chlamydomonas reinhardtii HOM05D004191 ORTHO05D004887 1.5e-59 233.4 201 56.7
Sp2g07630 Schrenkiella parvula HOM05D004191 ORTHO05D004887 4.8e-53 211.8 140 76.4
Cfa020410 Carpinus fangiana HOM05D004191 ORTHO05D004887 2.2e-50 203.0 102 92.2
AagrBONN_evm.TU.Sc2ySwM_362.1580 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.1e-49 200.7 149 67.1
COL.COLO4_37956 Corchorus olitorius HOM05D004191 ORTHO05D004887 7.9e-48 194.5 98 89.8
PRCOL_00004686 Prasinoderma coloniale HOM05D004191 ORTHO05D004887 6.6e-47 191.4 183 50.3
SEGI_28528 Sequoiadendron giganteum HOM05D004191 ORTHO05D004887 1.9e-46 189.9 98 90.8
Psat7g161320 Pisum sativum HOM05D004191 ORTHO05D004887 1.3e-45 187.2 102 84.3
TWI38G1856 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 1.6e-45 186.8 110 78.2
MCO14G457 Micromonas commoda HOM05D004191 ORTHO05D004887 2.6e-43 179.5 191 47.6
CDE05G2537 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 5.8e-43 178.3 123 73.2
AUR62030012 Chenopodium quinoa HOM05D004191 ORTHO05D004887 5.5e-41 171.8 197 50.8
Nn5g28123 Nelumbo nucifera HOM05D004191 ORTHO05D004887 9.0e-36 154.5 85 88.2
HanXRQChr11g0332951 Helianthus annuus HOM05D004191 ORTHO05D004887 1.2e-27 127.5 157 51.0
Pp3c2_32190 Physcomitrium patens HOM05D004191 ORTHO05D004887 2.6e-19 99.8 75 61.3
Cfa020409 Carpinus fangiana HOM05D004191 ORTHO05D004887 5.9e-19 98.6 52 92.3
COL.COLO4_37955 Corchorus olitorius HOM05D004191 ORTHO05D004887 1.1e-17 94.4 52 90.4
Haze_09622 Corylus avellana HOM05D004191 ORTHO05D004887 1.6e-16 90.5 49 89.8
Haze_09618 Corylus avellana HOM05D004191 ORTHO05D004887 2.0e-14 83.6 45 88.9
Actinidia19733 Actinidia chinensis HOM05D004191 ORTHO05D004887 1.3e-13 80.9 41 90.2
Medtr4g027400 Medicago truncatula HOM05D004191 ORTHO05D004887 1.1e-12 77.8 47 78.7
Ah.07g199550 Amaranthus hybridus HOM05D004191 ORTHO05D004887 2.4e-12 76.6 41 85.4
Ah.12g056770 Amaranthus hybridus HOM05D004191 ORTHO05D004887 3.1e-12 76.3 68 55.9
Ah.07g199480 Amaranthus hybridus HOM05D004191 ORTHO05D060174 2.0e-11 73.6 39 82.1
Rhsim01G0090000 Rhododendron simsii HOM05D004191 ORTHO05D004887 1.1e-09 67.8 69 55.1


User provided reference genes

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