Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G4411 Papaver somniferum HOM05D007108 ORTHO05D009128 1.1e-147 526.6 258 100.0
PSO063G1249 Papaver somniferum HOM05D007108 ORTHO05D009128 6.7e-145 517.3 258 98.1
Aqoxy5G02215 Aquilegia oxysepala HOM05D007108 ORTHO05D009128 2.8e-98 362.5 247 72.5
Nn5g28655 Nelumbo nucifera HOM05D007108 ORTHO05D009128 3.6e-98 362.1 251 70.5
TAR628G0410 Trochodendron aralioides HOM05D007108 ORTHO05D009128 1.5e-96 356.7 260 71.9
BraA06t24837Z Brassica rapa HOM05D007108 ORTHO05D009128 7.1e-94 347.8 247 69.6
TWI34G1539 Tripterygium wilfordii HOM05D007108 ORTHO05D009128 7.1e-94 347.8 230 73.9
CARHR021740 Cardamine hirsuta HOM05D007108 ORTHO05D009128 9.2e-94 347.4 254 68.1
Actinidia29517 Actinidia chinensis HOM05D007108 ORTHO05D009128 2.1e-93 346.3 221 76.5
Sopen04g026870 Solanum pennellii HOM05D007108 ORTHO05D009128 2.7e-93 345.9 195 82.6
Gohir.D05G243400 Gossypium hirsutum HOM05D007108 ORTHO05D009128 3.5e-93 345.5 212 76.4
RcHm_v2.0_Chr6g0276751 Rosa chinensis HOM05D007108 ORTHO05D009128 3.5e-93 345.5 253 68.8
BcaC05g26041 Brassica carinata HOM05D007108 ORTHO05D009128 4.6e-93 345.1 248 69.4
A06p17400 Brassica napus HOM05D007108 ORTHO05D009128 4.6e-93 345.1 254 67.3
Peaxi162Scf00263g00613 Petunia axillaris HOM05D007108 ORTHO05D009128 4.6e-93 345.1 253 68.4
vmacro13384 Vaccinium macrocarpon HOM05D007108 ORTHO05D009128 6.0e-93 344.7 255 68.2
AL1G34450 Arabidopsis lyrata HOM05D007108 ORTHO05D009128 7.8e-93 344.4 254 66.9
MSTRG.1369 Avicennia marina HOM05D007108 ORTHO05D009128 7.8e-93 344.4 230 71.7
BolC5t30716H Brassica oleracea HOM05D007108 ORTHO05D009128 7.8e-93 344.4 247 69.6
Thhalv10008558m.g Eutrema salsugineum HOM05D007108 ORTHO05D009128 1.0e-92 344.0 254 67.7
Gohir.A05G242100 Gossypium hirsutum HOM05D007108 ORTHO05D009128 1.0e-92 344.0 233 71.7
GSVIVG01010051001 Vitis vinifera HOM05D007108 ORTHO05D009128 1.0e-92 344.0 205 79.0
Atru.chr13.2257 Acer truncatum HOM05D007108 ORTHO05D009128 1.3e-92 343.6 233 72.1
Rhsim07G0025600 Rhododendron simsii HOM05D007108 ORTHO05D009128 1.7e-92 343.2 258 68.2
THA.LOC104812052 Tarenaya hassleriana HOM05D007108 ORTHO05D009128 1.7e-92 343.2 254 67.7
Aa31LG7G5350 Aethionema arabicum HOM05D007108 ORTHO05D009128 2.3e-92 342.8 253 68.8
Gorai.009G252700 Gossypium raimondii HOM05D007108 ORTHO05D009128 3.0e-92 342.4 212 75.9
Prupe.8G021900 Prunus persica HOM05D007108 ORTHO05D009128 3.0e-92 342.4 207 76.8
Carub.0001s2075 Capsella rubella HOM05D007108 ORTHO05D009128 3.9e-92 342.0 241 69.3
FvH4_2g14420 Fragaria vesca HOM05D007108 ORTHO05D009128 5.1e-92 341.7 198 79.8
Solyc04g064930.3 Solanum lycopersicum HOM05D007108 ORTHO05D009128 5.1e-92 341.7 195 81.5
Migut.C01030 Erythranthe guttata HOM05D007108 ORTHO05D009128 6.6e-92 341.3 208 77.4
VMungo1309G2491 Vigna mungo HOM05D007108 ORTHO05D009128 6.6e-92 341.3 212 75.9
Lj1g0003350 Lotus japonicus HOM05D007108 ORTHO05D009128 8.6e-92 340.9 212 76.4
CSS0020358 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 1.1e-91 340.5 255 67.1
Duzib116G0089 Durio zibethinus HOM05D007108 ORTHO05D009128 1.1e-91 340.5 256 66.8
ClCG09G009870 Citrullus lanatus HOM05D007108 ORTHO05D009128 3.3e-91 339.0 225 72.4
MD05G1017900 Malus domestica HOM05D007108 ORTHO05D009128 4.3e-91 338.6 253 68.4
CANSAT25G1119 Cannabis sativa HOM05D007108 ORTHO05D009128 5.6e-91 338.2 250 68.4
Eucgr.F02729 Eucalyptus grandis HOM05D007108 ORTHO05D009128 5.6e-91 338.2 257 68.5
CSS0038886 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 7.3e-91 337.8 255 67.1
Glyma.04G239800 Glycine max HOM05D007108 ORTHO05D009128 7.3e-91 337.8 212 75.0
Glyma.06G124100 Glycine max HOM05D007108 ORTHO05D009128 7.3e-91 337.8 212 75.9
BcaB07g32123 Brassica carinata HOM05D007108 ORTHO05D009128 2.1e-90 336.3 258 65.9
Ca_16662_v3 Cicer arietinum L. HOM05D007108 ORTHO05D009128 2.1e-90 336.3 240 69.6
CAN.G1564.2 Capsicum annuum HOM05D007108 ORTHO05D009128 3.6e-90 335.5 195 80.0
CsaV3_7G024840 Cucumis sativus L. HOM05D007108 ORTHO05D009128 3.6e-90 335.5 226 71.2
HanXRQChr16g0500661 Helianthus annuus HOM05D007108 ORTHO05D009128 3.6e-90 335.5 220 73.6
Phvul.009G136100 Phaseolus vulgaris HOM05D007108 ORTHO05D009128 3.6e-90 335.5 211 74.9
Cc10_g14220 Coffea canephora HOM05D007108 ORTHO05D009128 6.2e-90 334.7 255 65.1
Sp1g18900 Schrenkiella parvula HOM05D007108 ORTHO05D009128 8.1e-90 334.3 253 66.0
Thecc.08G146100 Theobroma cacao HOM05D007108 ORTHO05D009128 1.1e-89 334.0 256 65.6
AT1G21350 Arabidopsis thaliana HOM05D007108 ORTHO05D009128 1.4e-89 333.6 195 80.0
ECA232G2155 Erigeron canadensis HOM05D007108 ORTHO05D009128 4.0e-89 332.0 258 64.0
Sed0009335 Sechium edule HOM05D007108 ORTHO05D009128 5.2e-89 331.6 250 65.6
QL02p024940 Quercus lobata HOM05D007108 ORTHO05D009128 6.8e-89 331.3 199 78.9
Sc02g0004350 Simmondsia chinensis HOM05D007108 ORTHO05D009128 1.2e-88 330.5 200 78.5
Ciclev10002261m.g Citrus clementina HOM05D007108 ORTHO05D009128 1.5e-88 330.1 193 78.8
Haze_17721 Corylus avellana HOM05D007108 ORTHO05D009128 2.0e-88 329.7 211 74.4
DCAR_010274 Daucus carota HOM05D007108 ORTHO05D009128 2.6e-88 329.3 221 72.4
Lalb_Chr11g0066481 Lupinus albus HOM05D007108 ORTHO05D009128 3.4e-88 328.9 225 71.6
TPR.G18750 Trifolium pratense HOM05D007108 ORTHO05D009128 3.4e-88 328.9 197 80.2
Potri.002G071000 Populus trichocarpa HOM05D007108 ORTHO05D009128 4.4e-88 328.6 195 77.4
Hma1.2p1_0107F.1_g051540 Hydrangea macrophylla HOM05D007108 ORTHO05D009128 5.8e-88 328.2 207 75.4
Medtr3g090490 Medicago truncatula HOM05D007108 ORTHO05D009128 5.8e-88 328.2 245 67.3
Os07g0260300 Oryza sativa ssp. japonica HOM05D007108 ORTHO05D009128 9.9e-88 327.4 191 79.1
Oeu000778.2 Olea europaea HOM05D007108 ORTHO05D009128 2.2e-87 326.2 281 60.5
CDE08G0865 Ceratophyllum demersum HOM05D007108 ORTHO05D009128 2.9e-87 325.9 251 66.5
Manes.18G088801 Manihot esculenta HOM05D007108 ORTHO05D009128 3.7e-87 325.5 253 66.8
Cpa.g.sc49.50 Carica papaya HOM05D007108 ORTHO05D009128 4.9e-87 325.1 185 82.7
EL10Ac1g01484 Beta vulgaris HOM05D007108 ORTHO05D009128 1.9e-86 323.2 225 71.6
C05p20230 Brassica napus HOM05D007108 ORTHO05D009128 2.4e-86 322.8 238 68.5
arahy.Tifrunner.gnm1.ann1.3M80B2 Arachis hypogaea HOM05D007108 ORTHO05D009128 1.6e-85 320.1 224 71.0
Lsat_1_v5_gn_9_77661 Lactuca sativa HOM05D007108 ORTHO05D009128 1.6e-85 320.1 252 63.9
SEGI_12340 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 2.7e-85 319.3 200 74.0
COL.COLO4_06005 Corchorus olitorius HOM05D007108 ORTHO05D009128 1.5e-83 313.5 253 64.0
arahy.Tifrunner.gnm1.ann1.QUZ9E8 Arachis hypogaea HOM05D007108 ORTHO05D009128 1.4e-81 307.0 252 63.9
Nitab4.5_0000299g0220 Nicotiana tabacum HOM05D007108 ORTHO05D009128 1.7e-79 300.1 253 60.1
SEGI_05187 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 4.9e-79 298.5 190 72.1
AUR62026764 Chenopodium quinoa HOM05D007108 ORTHO05D009128 1.1e-78 297.4 244 66.0
PSO384G3614 Papaver somniferum HOM05D007108 ORTHO05D009128 1.1e-78 297.4 238 67.6
Pp3c20_22500 Physcomitrium patens HOM05D007108 ORTHO05D009128 2.4e-78 296.2 247 60.3
ATR1136G010 Amborella trichopoda HOM05D007108 ORTHO05D009128 1.3e-76 290.4 252 61.5
FAN20G1168 Fragaria x ananassa HOM05D007108 ORTHO05D009128 1.3e-76 290.4 193 71.5
CiPaw.16G016700 Carya illinoinensis HOM05D007108 ORTHO05D009128 1.7e-76 290.0 200 70.0
SGA_v2.0_scaffold24G10368 Striga asiatica HOM05D007108 ORTHO05D009128 8.7e-76 287.7 186 74.7
Dinv41114 Davidia involucrata HOM05D007108 ORTHO05D009128 1.1e-75 287.3 208 70.7
CBR_g41654 Chara braunii HOM05D007108 ORTHO05D009128 1.9e-75 286.6 202 65.8
Pp3c23_490 Physcomitrium patens HOM05D007108 ORTHO05D009128 4.8e-74 282.0 178 69.7
Actinidia01141 Actinidia chinensis HOM05D007108 ORTHO05D009128 3.4e-72 275.8 197 69.0
Psat5g082320 Pisum sativum HOM05D007108 ORTHO05D009128 1.6e-69 266.9 178 74.2
AagrBONN_evm.TU.Sc2ySwM_117.292 Anthoceros agrestis HOM05D007108 ORTHO05D009128 2.1e-69 266.5 196 62.8
unitig_26.g9907 Utricularia gibba HOM05D007108 ORTHO05D009128 7.3e-67 258.1 197 63.5
AUR62013508 Chenopodium quinoa HOM05D007108 ORTHO05D009128 1.8e-65 253.4 270 56.7
SMO228G0194 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 3.2e-62 242.7 148 77.0
Sabra02G0055700 Salix brachista HOM05D007108 ORTHO05D009128 3.0e-60 236.1 191 61.8
MELO3C024103.2 Cucumis melo HOM05D007108 ORTHO05D009128 8.7e-60 234.6 158 70.9
SMO347G0599 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 3.2e-54 216.1 173 60.1
FAN24G1879 Fragaria x ananassa HOM05D007108 ORTHO05D009128 1.9e-51 206.8 192 57.3
FAN15G3050 Fragaria x ananassa HOM05D007108 ORTHO05D009128 2.5e-51 206.5 192 56.8
Nitab4.5_0000427g0030 Nicotiana tabacum HOM05D007108 ORTHO05D009128 1.3e-50 204.1 137 72.3
Cre17.g715500 Chlamydomonas reinhardtii HOM05D007108 ORTHO05D009128 2.4e-49 199.9 195 50.3
Lj7A366T74 Lonicera japonica HOM05D007108 ORTHO05D009128 4.5e-48 195.7 200 54.0
Zm00001eb097150 Zea mays HOM05D007108 ORTHO05D009128 3.9e-44 182.6 169 60.4
SEGI_19863 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 9.7e-43 177.9 105 81.0
HanXRQChr03g0063741 Helianthus annuus HOM05D007108 ORTHO05D009128 4.8e-42 175.6 103 77.7
SMO228G0031 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 2.2e-39 166.8 149 51.0
Ca_16660_v3 Cicer arietinum L. HOM05D006773 ORTHO05D008775 7.7e-24 115.2 203 39.4
Psat7g065200 Pisum sativum HOM05D007108 ORTHO05D009128 2.9e-23 113.2 70 72.9
Psat2g167120 Pisum sativum HOM05D007108 ORTHO05D003402 3.6e-21 106.3 71 74.6
Dinv25820 Davidia involucrata HOM05D007108 ORTHO05D009128 2.8e-10 70.1 59 59.3


User provided reference genes

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