Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G2976 Papaver somniferum HOM05D006092 ORTHO05D007508 1.2e-80 303.1 156 100.0
PSO782G4285 Papaver somniferum HOM05D006092 ORTHO05D007508 1.2e-80 303.1 156 100.0
Nn1g07635 Nelumbo nucifera HOM05D006092 ORTHO05D007508 2.5e-54 215.7 171 73.1
Oeu013004.1 Olea europaea HOM05D006092 ORTHO05D007508 7.4e-54 214.2 160 75.0
Oeu006265.1 Olea europaea HOM05D006092 ORTHO05D007508 9.6e-54 213.8 158 75.9
GSVIVG01014842001 Vitis vinifera HOM05D006092 ORTHO05D007508 9.6e-54 213.8 164 73.2
Aqoxy4G02265 Aquilegia oxysepala HOM05D006092 ORTHO05D007508 1.6e-53 213.0 156 73.7
SalBow8G3834 Salvia bowleyana HOM05D006092 ORTHO05D007508 2.8e-53 212.2 158 75.3
Nitab4.5_0000611g0110 Nicotiana tabacum HOM05D006092 ORTHO05D007508 1.1e-52 210.3 161 75.2
PGSC0003DMG400022249 Solanum tuberosum HOM05D006092 ORTHO05D007508 1.1e-52 210.3 160 73.1
Phvul.005G004000 Phaseolus vulgaris HOM05D006092 ORTHO05D007508 1.8e-52 209.5 165 69.1
MBI14_g12737_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 3.1e-52 208.8 165 67.3
Nitab4.5_0000611g0120 Nicotiana tabacum HOM05D006092 ORTHO05D007508 3.1e-52 208.8 158 75.3
MBI15_g47946_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 4.0e-52 208.4 166 71.1
Sopen07g034330 Solanum pennellii HOM05D006092 ORTHO05D007508 5.3e-52 208.0 157 72.6
BcaB04g16937 Brassica carinata HOM05D006092 ORTHO05D007508 9.0e-52 207.2 162 71.0
BcaC01g01548 Brassica carinata HOM05D006092 ORTHO05D007508 9.0e-52 207.2 162 72.2
BolC3t21605H Brassica oleracea HOM05D006092 ORTHO05D007508 9.0e-52 207.2 162 72.2
Solyc07g066150.1 Solanum lycopersicum HOM05D006092 ORTHO05D007508 9.0e-52 207.2 157 72.6
BcaB02g10807 Brassica carinata HOM05D006092 ORTHO05D007508 1.2e-51 206.8 163 71.8
BcaB07g33193 Brassica carinata HOM05D006092 ORTHO05D007508 1.2e-51 206.8 162 71.0
BcaC08g43644 Brassica carinata HOM05D006092 ORTHO05D007508 1.2e-51 206.8 158 71.5
C06p10630 Brassica napus HOM05D006092 ORTHO05D007508 1.2e-51 206.8 158 71.5
BolC6t36143H Brassica oleracea HOM05D006092 ORTHO05D007508 1.2e-51 206.8 158 71.5
THA.LOC104822703 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 1.2e-51 206.8 161 71.4
Thecc.07G001800 Theobroma cacao HOM05D006092 ORTHO05D007508 1.2e-51 206.8 161 72.7
CAN.G623.73 Capsicum annuum HOM05D006092 ORTHO05D007508 1.5e-51 206.5 156 73.1
Cfa016959 Carpinus fangiana HOM05D006092 ORTHO05D007508 1.5e-51 206.5 166 71.7
C03p93010 Brassica napus HOM05D006092 ORTHO05D007508 2.0e-51 206.1 162 71.6
Glyma.04G112800 Glycine max HOM05D006092 ORTHO05D007508 2.6e-51 205.7 164 69.5
BcaC08g44210 Brassica carinata HOM05D006092 ORTHO05D007508 3.4e-51 205.3 162 71.0
A08p00380 Brassica napus HOM05D006092 ORTHO05D007508 3.4e-51 205.3 161 71.4
C06p16180 Brassica napus HOM05D006092 ORTHO05D007508 3.4e-51 205.3 162 71.0
BolC6t36815H Brassica oleracea HOM05D006092 ORTHO05D007508 3.4e-51 205.3 162 71.0
BraA08t32097Z Brassica rapa HOM05D006092 ORTHO05D007508 3.4e-51 205.3 161 71.4
Nitab4.5_0001622g0160 Nicotiana tabacum HOM05D006092 ORTHO05D007508 4.5e-51 204.9 158 74.1
ATR0751G135 Amborella trichopoda HOM05D006092 ORTHO05D007508 5.8e-51 204.5 168 71.4
RcHm_v2.0_Chr5g0074661 Rosa chinensis HOM05D006092 ORTHO05D007508 5.8e-51 204.5 158 70.9
A06p00060 Brassica napus HOM05D006092 ORTHO05D007508 7.6e-51 204.1 162 70.4
BraA06t23221Z Brassica rapa HOM05D006092 ORTHO05D007508 7.6e-51 204.1 162 70.4
Carub.0001s4419 Capsella rubella HOM05D006092 ORTHO05D007508 7.6e-51 204.1 161 71.4
Cpa.g.sc12.69 Carica papaya HOM05D006092 ORTHO05D007508 7.6e-51 204.1 161 68.3
CsaV3_3G004330 Cucumis sativus L. HOM05D006092 ORTHO05D007508 7.6e-51 204.1 156 72.4
FAN25G2470 Fragaria x ananassa HOM05D006092 ORTHO05D007508 7.6e-51 204.1 158 71.5
CDE05G1532 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 9.9e-51 203.8 168 66.7
Gohir.A04G001100 Gossypium hirsutum HOM05D006092 ORTHO05D007508 9.9e-51 203.8 164 72.0
Gorai.009G454900 Gossypium raimondii HOM05D006092 ORTHO05D007508 9.9e-51 203.8 164 72.0
SGA_v2.0_scaffold186G40234 Striga asiatica HOM05D006092 ORTHO05D007508 9.9e-51 203.8 154 71.4
VMungo1080G0991 Vigna mungo HOM05D006092 ORTHO05D007508 9.9e-51 203.8 163 67.5
A05p17350 Brassica napus HOM05D006092 ORTHO05D007508 1.7e-50 203.0 162 71.6
BraA05t20631Z Brassica rapa HOM05D006092 ORTHO05D007508 1.7e-50 203.0 162 71.6
ClCG10G004510 Citrullus lanatus HOM05D006092 ORTHO05D007508 1.7e-50 203.0 156 71.2
Migut.M01583 Erythranthe guttata HOM05D006092 ORTHO05D007508 1.7e-50 203.0 162 72.2
Prupe.6G035200 Prunus persica HOM05D006092 ORTHO05D007508 1.7e-50 203.0 165 67.3
Sc07g0002210 Simmondsia chinensis HOM05D006092 ORTHO05D007508 2.2e-50 202.6 142 76.1
Atru.chr2.3894 Acer truncatum HOM05D006092 ORTHO05D007508 2.9e-50 202.2 139 76.3
MELO3C014124.2 Cucumis melo HOM05D006092 ORTHO05D007508 2.9e-50 202.2 152 73.0
FvH4_3g41620 Fragaria vesca HOM05D006092 ORTHO05D007508 2.9e-50 202.2 158 71.5
FAN11G0712 Fragaria x ananassa HOM05D006092 ORTHO05D007508 2.9e-50 202.2 158 71.5
Glyma.06G321900 Glycine max HOM05D006092 ORTHO05D007508 3.8e-50 201.8 166 69.3
MD03G1042800 Malus domestica HOM05D006092 ORTHO05D007508 3.8e-50 201.8 166 69.9
QL08p000538 Quercus lobata HOM05D006092 ORTHO05D007508 3.8e-50 201.8 164 68.3
CDE11G0224 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 6.4e-50 201.1 166 65.7
PGR031G3987 Punica granatum HOM05D006092 ORTHO05D007508 6.4e-50 201.1 145 72.4
ECA246G4981 Erigeron canadensis HOM05D006092 ORTHO05D007508 8.4e-50 200.7 157 71.3
MBI15_g47073_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 8.4e-50 200.7 147 74.1
unitig_37.g11908 Utricularia gibba HOM05D006092 ORTHO05D007508 8.4e-50 200.7 157 70.7
THA.LOC104810303 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 1.4e-49 199.9 160 70.0
EL10Ac3g07451 Beta vulgaris HOM05D006092 ORTHO05D007508 1.9e-49 199.5 145 74.5
Gorai.013G148000 Gossypium raimondii HOM05D006092 ORTHO05D007508 2.4e-49 199.1 141 74.5
AT1G55670 Arabidopsis thaliana HOM05D006092 ORTHO05D007508 3.2e-49 198.7 162 70.4
Thhalv10011835m.g Eutrema salsugineum HOM05D006092 ORTHO05D007508 3.2e-49 198.7 162 70.4
Lsat_1_v5_gn_5_381 Lactuca sativa HOM05D006092 ORTHO05D007508 3.2e-49 198.7 156 72.4
Gohir.A13G128600 Gossypium hirsutum HOM05D006092 ORTHO05D007508 4.2e-49 198.4 139 74.8
Gohir.D13G132000 Gossypium hirsutum HOM05D006092 ORTHO05D007508 4.2e-49 198.4 139 74.1
HanXRQChr08g0232881 Helianthus annuus HOM05D006092 ORTHO05D007508 4.2e-49 198.4 147 73.5
Lalb_Chr18g0048631 Lupinus albus HOM05D006092 ORTHO05D007508 4.2e-49 198.4 142 73.9
Ciclev10009769m.g Citrus clementina HOM05D006092 ORTHO05D007508 5.5e-49 198.0 163 69.3
Haze_09914 Corylus avellana HOM05D006092 ORTHO05D007508 5.5e-49 198.0 165 69.7
Lj3g0000125 Lotus japonicus HOM05D006092 ORTHO05D007508 5.5e-49 198.0 169 67.5
Sed0026101 Sechium edule HOM05D006092 ORTHO05D007508 5.5e-49 198.0 162 67.9
CARHR045350 Cardamine hirsuta HOM05D006092 ORTHO05D007508 1.2e-48 196.8 162 70.4
AL1G63740 Arabidopsis lyrata HOM05D006092 ORTHO05D007508 1.6e-48 196.4 162 69.8
HanXRQChr05g0160351 Helianthus annuus HOM05D006092 ORTHO05D007508 2.1e-48 196.1 158 70.9
Aa31LG10G560 Aethionema arabicum HOM05D006092 ORTHO05D007508 2.7e-48 195.7 162 67.3
Rhsim04G0007400 Rhododendron simsii HOM05D006092 ORTHO05D007508 2.7e-48 195.7 158 70.9
Sabra16G0320400 Salix brachista HOM05D006092 ORTHO05D007508 3.5e-48 195.3 157 70.1
unitig_92.g28271 Utricularia gibba HOM05D006092 ORTHO05D007508 3.5e-48 195.3 157 69.4
Ah.04g149440 Amaranthus hybridus HOM05D006092 ORTHO05D007508 6.0e-48 194.5 138 73.2
Potri.001G471900 Populus trichocarpa HOM05D006092 ORTHO05D007508 6.0e-48 194.5 155 71.0
Potri.011G168700 Populus trichocarpa HOM05D006092 ORTHO05D007508 6.0e-48 194.5 154 71.4
Psat5g231800 Pisum sativum HOM05D006092 ORTHO05D007508 1.0e-47 193.7 167 67.7
TPR.G16714 Trifolium pratense HOM05D006092 ORTHO05D007508 1.0e-47 193.7 139 73.4
arahy.Tifrunner.gnm1.ann1.4PD0PP Arachis hypogaea HOM05D006092 ORTHO05D007508 1.3e-47 193.4 154 70.8
CANSAT11G0425 Cannabis sativa HOM05D006092 ORTHO05D007508 1.3e-47 193.4 166 67.5
COL.COLO4_07787 Corchorus olitorius HOM05D006092 ORTHO05D007508 1.3e-47 193.4 102 92.2
AUR62020866 Chenopodium quinoa HOM05D006092 ORTHO05D007508 1.8e-47 193.0 105 89.5
Eucgr.F03646 Eucalyptus grandis HOM05D006092 ORTHO05D007508 1.8e-47 193.0 149 69.8
Sabra11G0138000 Salix brachista HOM05D006092 ORTHO05D007508 1.8e-47 193.0 155 70.3
AUR62018553 Chenopodium quinoa HOM05D006092 ORTHO05D007508 2.3e-47 192.6 100 93.0
Manes.01G006400 Manihot esculenta HOM05D006092 ORTHO05D007508 2.3e-47 192.6 156 69.2
TWI38G1372 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 5.1e-47 191.4 162 68.5
Lj8P183T26 Lonicera japonica HOM05D006092 ORTHO05D007508 1.9e-46 189.5 142 70.4
TWI39G1159 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 2.5e-46 189.1 162 68.5
CARHR087970 Cardamine hirsuta HOM05D006092 ORTHO05D007508 4.8e-45 184.9 140 71.4
Sed0012341 Sechium edule HOM05D006092 ORTHO05D007508 4.8e-45 184.9 119 78.2
Zm00001eb316290 Zea mays HOM05D006092 ORTHO05D007508 4.8e-45 184.9 148 67.6
Os09g0481200 Oryza sativa ssp. japonica HOM05D006092 ORTHO05D007508 6.9e-44 181.0 147 63.9
HPP92_022812 Vanilla planifolia HOM05D006092 ORTHO05D007508 6.9e-44 181.0 120 75.0
Zm00001eb101660 Zea mays HOM05D006092 ORTHO05D007508 2.9e-42 175.6 152 63.2
Dinv40914 Davidia involucrata HOM05D006092 ORTHO05D007508 4.2e-41 171.8 155 63.9
Nitab4.5_0000611g0130 Nicotiana tabacum HOM05D006092 ORTHO05D007508 4.6e-40 168.3 153 66.7
SEGI_13197 Sequoiadendron giganteum HOM05D006092 ORTHO05D007508 1.8e-39 166.4 102 79.4
Medtr3g010000 Medicago truncatula HOM05D006092 ORTHO05D007508 1.9e-38 162.9 167 60.5
CiPaw.11G210500 Carya illinoinensis HOM05D006092 ORTHO05D007508 2.5e-33 146.0 168 55.4
SMO353G0046 Selaginella moellendorffii HOM05D006092 ORTHO05D007508 1.8e-31 139.8 97 69.1
AagrBONN_evm.TU.Sc2ySwM_228.5128 Anthoceros agrestis HOM05D006092 ORTHO05D007508 8.8e-31 137.5 116 60.3
Pp3c15_5850 Physcomitrium patens HOM05D006092 ORTHO05D007508 8.8e-31 137.5 153 49.0
Pp3c9_15440 Physcomitrium patens HOM05D006092 ORTHO05D007508 1.5e-30 136.7 137 51.1
Mapoly0038s0054 Marchantia polymorpha HOM05D006092 ORTHO05D007508 1.1e-28 130.6 130 53.8
CBR_g28070 Chara braunii HOM05D006092 ORTHO05D007508 6.9e-28 127.9 125 52.8
Sp1g41280 Schrenkiella parvula HOM05D006092 ORTHO05D007508 5.9e-27 124.8 163 52.1
TAR627G0509 Trochodendron aralioides HOM05D006092 ORTHO05D007508 9.4e-25 117.5 72 80.6
PGSC0003DMG400006702 Solanum tuberosum HOM05D006092 ORTHO05D007508 3.1e-20 102.4 123 49.6
EL10As5g23536 Beta vulgaris HOM05D006092 ORTHO05D007508 4.5e-19 98.6 52 92.3
EL10Ac3g06625 Beta vulgaris HOM05D006092 ORTHO05D007508 5.0e-18 95.1 50 92.0
EL10Ac5g10941 Beta vulgaris HOM05D006092 ORTHO05D007508 5.0e-18 95.1 50 92.0
PRCOL_00006984 Prasinoderma coloniale HOM05D006092 ORTHO05D007508 8.5e-18 94.4 90 53.3
MCO01G478 Micromonas commoda HOM05D006092 ORTHO05D007508 3.6e-16 89.0 86 54.7
Cre12.g560950 Chlamydomonas reinhardtii HOM05D006092 ORTHO05D007508 1.2e-11 73.9 115 38.3


User provided reference genes

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