Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G4156 Papaver somniferum HOM05D001952 ORTHO05D004913 2.5e-95 352.1 173 100.0
PSO478G1189 Papaver somniferum HOM05D001952 ORTHO05D004913 1.6e-70 269.6 141 95.7
PSO782G1679 Papaver somniferum HOM05D001952 ORTHO05D004913 4.8e-70 268.1 141 95.0
PSO326G0001 Papaver somniferum HOM05D001952 ORTHO05D004913 6.2e-70 267.7 134 99.3
PSO541G2051 Papaver somniferum HOM05D001952 ORTHO05D004913 7.9e-57 224.2 139 79.9
PSO781G0092 Papaver somniferum HOM05D001952 ORTHO05D004913 4.5e-44 181.8 135 66.7
PSO781G0068 Papaver somniferum HOM05D001952 ORTHO05D004913 5.0e-35 151.8 132 56.1
Lj6A55T16 Lonicera japonica HOM05D001952 ORTHO05D004913 2.7e-33 146.0 134 56.0
PSO541G1892 Papaver somniferum HOM05D001952 ORTHO05D004913 2.3e-32 142.9 132 53.0
TAR375G0220 Trochodendron aralioides HOM05D001952 ORTHO05D004913 8.8e-32 141.0 135 54.1
Aqoxy2G02797 Aquilegia oxysepala HOM05D001952 ORTHO05D004913 4.8e-30 135.2 135 51.1
PSO781G0254 Papaver somniferum HOM05D001952 ORTHO05D004913 9.1e-29 131.0 132 50.8
GSVIVG01026499001 Vitis vinifera HOM05D001952 ORTHO05D008796 9.1e-29 131.0 135 51.9
CSS0039830 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D004913 1.2e-28 130.6 134 48.5
Oeu024552.2 Olea europaea HOM05D001952 ORTHO05D004913 1.5e-28 130.2 125 55.2
CSS0007104 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D004913 2.6e-28 129.4 134 48.5
MBI17_g11655_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 3.5e-28 129.0 127 53.5
MBI05_g28393_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 5.9e-28 128.3 127 52.0
Hund16968 Selenicereus undatus HOM05D001952 ORTHO05D004913 1.3e-27 127.1 133 48.9
Aqoxy5G00703 Aquilegia oxysepala HOM05D001952 ORTHO05D004913 2.9e-27 125.9 124 54.0
Rhsim05G0144200 Rhododendron simsii HOM05D001952 ORTHO05D004913 2.9e-27 125.9 134 50.0
AUR62033377 Chenopodium quinoa HOM05D001952 ORTHO05D004913 5.0e-27 125.2 132 47.0
COL.COLO4_19760 Corchorus olitorius HOM05D001952 ORTHO05D004913 6.5e-27 124.8 124 50.0
AUR62004280 Chenopodium quinoa HOM05D001952 ORTHO05D004913 8.5e-27 124.4 133 47.4
Nitab4.5_0000603g0070 Nicotiana tabacum HOM05D001952 ORTHO05D004913 1.5e-26 123.6 134 48.5
Nitab4.5_0003477g0020 Nicotiana tabacum HOM05D001952 ORTHO05D004913 3.2e-26 122.5 135 48.1
Ciclev10004825m.g Citrus clementina HOM05D001952 ORTHO05D004913 4.2e-26 122.1 136 49.3
Haze_16907 Corylus avellana HOM05D001952 ORTHO05D004913 4.2e-26 122.1 173 39.3
Haze_00291 Corylus avellana HOM05D001952 ORTHO05D004913 5.5e-26 121.7 173 39.3
Medtr7g075940 Medicago truncatula HOM05D001952 ORTHO05D004913 7.2e-26 121.3 132 47.0
vmacro19640 Vaccinium macrocarpon HOM05D001952 ORTHO05D004913 7.2e-26 121.3 134 48.5
Atru.chr1.534 Acer truncatum HOM05D001952 ORTHO05D004913 9.4e-26 120.9 136 47.8
Ah.05g175860 Amaranthus hybridus HOM05D001952 ORTHO05D004913 9.4e-26 120.9 133 44.4
PGSC0003DMG400016476 Solanum tuberosum HOM05D001952 ORTHO05D004913 9.4e-26 120.9 134 47.8
AT4G00231 Arabidopsis thaliana HOM05D001952 ORTHO05D004913 1.2e-25 120.6 132 47.7
Aa31LG11G5430 Aethionema arabicum HOM05D001952 ORTHO05D004913 1.6e-25 120.2 132 48.5
CAN.G1014.4 Capsicum annuum HOM05D001952 ORTHO05D004913 1.6e-25 120.2 134 49.3
Cc02_g37060 Coffea canephora HOM05D001952 ORTHO05D004913 1.6e-25 120.2 132 47.0
MD15G1435200 Malus domestica HOM05D001952 ORTHO05D004913 1.6e-25 120.2 128 48.4
Solyc02g080650.3 Solanum lycopersicum HOM05D001952 ORTHO05D004913 1.6e-25 120.2 134 48.5
Sopen02g025360 Solanum pennellii HOM05D001952 ORTHO05D004913 1.6e-25 120.2 134 48.5
Hma1.2p1_0132F.1_g060740 Hydrangea macrophylla HOM05D001952 ORTHO05D004913 2.7e-25 119.4 125 48.8
AL6G53250 Arabidopsis lyrata HOM05D001952 ORTHO05D004913 3.6e-25 119.0 134 47.8
EL10Ac1g00960 Beta vulgaris HOM05D001952 ORTHO05D004913 3.6e-25 119.0 163 38.7
FvH4_7g08540 Fragaria vesca HOM05D001952 ORTHO05D004913 3.6e-25 119.0 133 47.4
FAN06G4730 Fragaria x ananassa HOM05D001952 ORTHO05D004913 3.6e-25 119.0 133 47.4
Peaxi162Scf00231g00244 Petunia axillaris HOM05D001952 ORTHO05D004913 3.6e-25 119.0 134 50.0
CANSAT56G1737 Cannabis sativa HOM05D001952 ORTHO05D004913 6.1e-25 118.2 132 44.7
MELO3C003326.2 Cucumis melo HOM05D001952 ORTHO05D004913 6.1e-25 118.2 133 49.6
FAN10G0713 Fragaria x ananassa HOM05D001952 ORTHO05D004913 6.1e-25 118.2 133 46.6
FAN10G1564 Fragaria x ananassa HOM05D001952 ORTHO05D004913 6.1e-25 118.2 133 46.6
Psat3g112920 Pisum sativum HOM05D001952 ORTHO05D004913 6.1e-25 118.2 130 44.6
Aa31LG4G9800 Aethionema arabicum HOM05D001952 ORTHO05D004913 8.0e-25 117.9 134 48.5
Cpa.g.sc753.2 Carica papaya HOM05D001952 ORTHO05D004913 8.0e-25 117.9 125 51.2
Migut.L00973 Erythranthe guttata HOM05D001952 ORTHO05D004913 8.0e-25 117.9 130 49.2
Peaxi162Scf00207g01356 Petunia axillaris HOM05D001952 ORTHO05D004913 8.0e-25 117.9 134 50.0
PGSC0003DMG402027917 Solanum tuberosum HOM05D001952 ORTHO05D004913 8.0e-25 117.9 134 47.8
QL08p050945 Quercus lobata HOM05D001952 ORTHO05D004913 1.0e-24 117.5 135 47.4
Migut.D01751 Erythranthe guttata HOM05D001952 ORTHO05D004913 1.8e-24 116.7 130 46.9
FAN06G0845 Fragaria x ananassa HOM05D001952 ORTHO05D004913 3.0e-24 115.9 133 46.6
FAN06G0866 Fragaria x ananassa HOM05D001952 ORTHO05D004913 3.0e-24 115.9 133 46.6
Aa31LG10G10140 Aethionema arabicum HOM05D001952 ORTHO05D004913 6.7e-24 114.8 134 46.3
FvH4_7g12770 Fragaria vesca HOM05D001952 ORTHO05D004913 6.7e-24 114.8 133 46.6
TPR.G34267 Trifolium pratense HOM05D001952 ORTHO05D004913 6.7e-24 114.8 131 43.5
Duzib213G0290 Durio zibethinus HOM05D001952 ORTHO05D004913 8.8e-24 114.4 134 46.3
PGR004G1086 Punica granatum HOM05D001952 ORTHO05D004913 8.8e-24 114.4 130 45.4
Migut.D01755 Erythranthe guttata HOM05D001952 ORTHO05D004913 1.1e-23 114.0 130 45.4
Migut.L00878 Erythranthe guttata HOM05D001952 ORTHO05D004913 1.1e-23 114.0 130 45.4
FAN03G2676 Fragaria x ananassa HOM05D001952 ORTHO05D004913 1.1e-23 114.0 133 45.9
Thecc.07G183300 Theobroma cacao HOM05D001952 ORTHO05D004913 1.5e-23 113.6 134 45.5
Thhalv10025092m.g Eutrema salsugineum HOM05D001952 ORTHO05D004913 2.0e-23 113.2 132 47.7
ECA236G1094 Erigeron canadensis HOM05D001952 ORTHO05D004913 2.6e-23 112.8 127 44.9
Lsat_1_v5_gn_7_6921 Lactuca sativa HOM05D001952 ORTHO05D004913 2.6e-23 112.8 172 37.8
arahy.Tifrunner.gnm1.ann1.7790ZZ Arachis hypogaea HOM05D001952 ORTHO05D004913 3.3e-23 112.5 131 43.5
TWI34G0947 Tripterygium wilfordii HOM05D001952 ORTHO05D004913 3.3e-23 112.5 173 38.7
RcHm_v2.0_Chr1g0313121 Rosa chinensis HOM05D001952 ORTHO05D004913 4.4e-23 112.1 134 44.8
Sabra14G0053600 Salix brachista HOM05D001952 ORTHO05D004913 4.4e-23 112.1 133 46.6
arahy.Tifrunner.gnm1.ann1.U9VUHP Arachis hypogaea HOM05D001952 ORTHO05D004913 5.7e-23 111.7 131 44.3
arahy.Tifrunner.gnm1.ann1.Z6RYGL Arachis hypogaea HOM05D001952 ORTHO05D004913 5.7e-23 111.7 131 44.3
Ca_07851_v3 Cicer arietinum L. HOM05D001952 ORTHO05D004913 5.7e-23 111.7 119 47.1
Sc02g0002270 Simmondsia chinensis HOM05D001952 ORTHO05D004913 5.7e-23 111.7 133 43.6
DCAR_006897 Daucus carota HOM05D001952 ORTHO05D004913 7.5e-23 111.3 125 44.0
Lalb_Chr19g0127181 Lupinus albus HOM05D001952 ORTHO05D004913 7.5e-23 111.3 135 40.7
Psat4g209120 Pisum sativum HOM05D001952 ORTHO05D004913 9.7e-23 110.9 131 43.5
Sp6g00320 Schrenkiella parvula HOM05D001952 ORTHO05D004913 9.7e-23 110.9 132 47.7
Gohir.D01G084100 Gossypium hirsutum HOM05D001952 ORTHO05D004913 1.3e-22 110.5 139 43.2
SalBow7G2566 Salvia bowleyana HOM05D001952 ORTHO05D004913 1.3e-22 110.5 125 47.2
Carub.0005s0957 Capsella rubella HOM05D001952 ORTHO05D004913 1.7e-22 110.2 132 46.2
Gorai.002G109800 Gossypium raimondii HOM05D001952 ORTHO05D004913 1.7e-22 110.2 135 43.7
Potri.014G074900 Populus trichocarpa HOM05D001952 ORTHO05D004913 1.7e-22 110.2 131 45.0
THA.LOC104801468 Tarenaya hassleriana HOM05D001952 ORTHO05D004913 2.2e-22 109.8 132 43.9
HanXRQChr04g0122171 Helianthus annuus HOM05D001952 ORTHO05D004913 2.8e-22 109.4 125 45.6
CARHR248310 Cardamine hirsuta HOM05D001952 ORTHO05D004913 4.8e-22 108.6 133 44.4
A09p00620 Brassica napus HOM05D001952 ORTHO05D004913 8.2e-22 107.8 132 47.0
C09p00240 Brassica napus HOM05D001952 ORTHO05D004913 8.2e-22 107.8 132 47.0
ClCG09G012850 Citrullus lanatus HOM05D001952 ORTHO05D004913 8.2e-22 107.8 133 47.4
RcHm_v2.0_Chr1g0351801 Rosa chinensis HOM05D001952 ORTHO05D004913 8.2e-22 107.8 134 43.3
BcaB01g02233 Brassica carinata HOM05D001952 ORTHO05D004913 1.1e-21 107.5 134 46.3
BraA09t35698Z Brassica rapa HOM05D001952 ORTHO05D004913 1.4e-21 107.1 132 47.0
Gohir.D01G083600 Gossypium hirsutum HOM05D001952 ORTHO05D004913 1.4e-21 107.1 135 43.0
SGA_v2.0_scaffold7G04047 Striga asiatica HOM05D001952 ORTHO05D004913 1.4e-21 107.1 132 44.7
Sed0000408 Sechium edule HOM05D001952 ORTHO05D004913 1.8e-21 106.7 133 45.9
VMungo1383G2849 Vigna mungo HOM05D001952 ORTHO05D004913 2.4e-21 106.3 127 42.5
ATR0820G267 Amborella trichopoda HOM05D001952 ORTHO05D004913 3.1e-21 105.9 124 41.1
Lj5g0018602 Lotus japonicus HOM05D001952 ORTHO05D004913 5.3e-21 105.1 137 40.1
Gorai.002G109400 Gossypium raimondii HOM05D001952 ORTHO05D004913 7.0e-21 104.8 124 45.2
Phvul.005G010100 Phaseolus vulgaris HOM05D001952 ORTHO05D005568 1.6e-20 103.6 126 44.4
Gohir.A01G099700 Gossypium hirsutum HOM05D001952 ORTHO05D004913 2.0e-20 103.2 135 41.5
Phvul.005G009900 Phaseolus vulgaris HOM05D001952 ORTHO05D004913 2.0e-20 103.2 126 44.4
Manes.05G041100 Manihot esculenta HOM05D001952 ORTHO05D004913 2.6e-20 102.8 134 41.8
unitig_0.g170 Utricularia gibba HOM05D001952 ORTHO05D004913 2.6e-20 102.8 127 44.1
Glyma.09G276502 Glycine max HOM05D001952 ORTHO05D004913 1.3e-19 100.5 133 42.9
BcaC04g24187 Brassica carinata HOM05D001952 ORTHO05D004913 1.7e-19 100.1 132 42.4
Eucgr.H05060 Eucalyptus grandis HOM05D001952 ORTHO05D004913 1.7e-19 100.1 131 41.2
Glyma.18G215400 Glycine max HOM05D001952 ORTHO05D004913 1.7e-19 100.1 128 41.4
Carub.0006s2681 Capsella rubella HOM05D001952 ORTHO05D004913 3.8e-19 99.0 133 42.1
BolC9t52959H Brassica oleracea HOM05D001952 ORTHO05D004913 1.1e-18 97.4 132 41.7
SEGI_08371 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 1.9e-18 96.7 139 37.4
CiPaw.02G175900 Carya illinoinensis HOM05D001952 ORTHO05D004913 4.2e-18 95.5 121 43.0
CDE01G0692 Ceratophyllum demersum HOM05D001952 ORTHO05D004913 4.2e-18 95.5 135 36.3
AagrBONN_evm.TU.Sc2ySwM_117.782 Anthoceros agrestis HOM05D001952 ORTHO05D004913 1.6e-17 93.6 127 39.4
Lj4g0006210 Lotus japonicus HOM05D001952 ORTHO05D004913 1.6e-17 93.6 139 39.6
Os03g0118900 Oryza sativa ssp. japonica HOM05D001952 ORTHO05D004913 1.4e-16 90.5 139 42.4
Hund09554 Selenicereus undatus HOM05D001952 ORTHO05D004913 8.8e-16 87.8 113 41.6
HPP92_001565 Vanilla planifolia HOM05D001952 ORTHO05D004913 1.5e-15 87.0 126 41.3
Pp3c21_1420 Physcomitrium patens HOM05D001952 ORTHO05D004913 2.6e-15 86.3 142 35.9
SMO351G0039 Selaginella moellendorffii HOM05D001952 ORTHO05D004913 1.3e-14 84.0 121 35.5
Duzib268G0813 Durio zibethinus HOM05D001952 ORTHO05D004913 1.7e-14 83.6 138 37.7
Dinv32411 Davidia involucrata HOM05D001952 ORTHO05D004913 6.3e-14 81.6 73 49.3
Gohir.A01G099100 Gossypium hirsutum HOM05D001952 ORTHO05D004913 1.4e-13 80.5 133 35.3
vmacro08923 Vaccinium macrocarpon HOM05D001952 ORTHO05D004913 1.8e-13 80.1 77 46.8
MD07G1124800 Malus domestica HOM05D001952 ORTHO05D004913 3.1e-13 79.3 82 50.0
TAR624G0159 Trochodendron aralioides HOM05D001952 ORTHO05D004913 3.1e-13 79.3 70 51.4
FAN01G0405 Fragaria x ananassa HOM05D001952 ORTHO05D004913 9.1e-13 77.8 132 37.1
CsaV3_3G049900 Cucumis sativus L. HOM05D001952 ORTHO05D004913 1.6e-12 77.0 76 48.7
Zm00001eb001350 Zea mays HOM05D001952 ORTHO05D004913 4.5e-12 75.5 130 40.0
TPR.G6606 Trifolium pratense HOM05D001952 ORTHO05D004913 1.3e-11 73.9 89 42.7
Prupe.2G152200 Prunus persica HOM05D001952 ORTHO05D004913 2.9e-11 72.8 73 45.2
MD02G1196600 Malus domestica HOM05D001952 ORTHO05D004913 8.5e-11 71.2 63 49.2
SEGI_14537 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 1.9e-10 70.1 96 36.5
Mapoly0062s0112 Marchantia polymorpha HOM05D001952 ORTHO05D004913 2.5e-10 69.7 200 26.5
CBR_g31682 Chara braunii HOM05D001952 ORTHO05D004913 1.7e-06 57.0 85 36.5


User provided reference genes

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